RNA–Protein interactions for RNA: ENST00000524835.5

TM9SF1-203, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2 BASIC

Gene TM9SF1, Length 1,938 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-203ENST00000524835 A6NED7 52 aa9.73□□□□□ -0.85
TM9SF1-203ENST00000524835 PRO0628Q9UI54 55 aa9.72□□□□□ -0.85
TM9SF1-203ENST00000524835 KRTAP3-3Q9BYR6 98 aa9.71□□□□□ -0.86
TM9SF1-203ENST00000524835 LCA10Q71F78 164 aa9.7□□□□□ -0.86
TM9SF1-203ENST00000524835 MUC17Q685J3 4493 aa9.69□□□□□ -0.86
TM9SF1-203ENST00000524835 H1FX-AS1Q4G0G2 97 aa9.69□□□□□ -0.86
TM9SF1-203ENST00000524835 HMCN2Q8NDA2 5059 aa9.69□□□□□ -0.86
TM9SF1-203ENST00000524835 RBM12B-AS1Q9P1G2 102 aa9.68□□□□□ -0.86
TM9SF1-203ENST00000524835 S4R3F8 94 aa9.68□□□□□ -0.86
TM9SF1-203ENST00000524835 A8MU10 97 aa9.66□□□□□ -0.86
TM9SF1-203ENST00000524835 KRTAP4-1Q9BYQ7 146 aa9.66□□□□□ -0.86
TM9SF1-203ENST00000524835 SEC61GP60059 68 aa9.64□□□□□ -0.87
TM9SF1-203ENST00000524835 SVIPQ8NHG7 77 aa9.62□□□□□ -0.87
TM9SF1-203ENST00000524835 CDC42SE1Q9NRR8 79 aa9.6□□□□□ -0.87
TM9SF1-203ENST00000524835 UQCR11O14957 56 aa9.54□□□□□ -0.88
TM9SF1-203ENST00000524835 SPATA8Q6RVD6 105 aa9.48□□□□□ -0.89
TM9SF1-203ENST00000524835 MIR22HGQ0VDD5 57 aa9.46□□□□□ -0.89
TM9SF1-203ENST00000524835 KRTAP19-2Q3LHN2 52 aa9.46□□□□□ -0.9
TM9SF1-203ENST00000524835 MUC2Q02817 5179 aa9.44□□□□□ -0.9
TM9SF1-203ENST00000524835 A0A1B0GU33 70 aa9.43□□□□□ -0.9
TM9SF1-203ENST00000524835 KRTAP10-6P60371 365 aaPredicted RBP9.43□□□□□ -0.9
TM9SF1-203ENST00000524835 KRTAP3-2Q9BYR7 98 aa9.43□□□□□ -0.9
TM9SF1-203ENST00000524835 CSAG1Q6PB30 78 aa9.42□□□□□ -0.9
TM9SF1-203ENST00000524835 H0YAA0 97 aa9.38□□□□□ -0.91
TM9SF1-203ENST00000524835 P0C880 135 aa9.31□□□□□ -0.92
TM9SF1-203ENST00000524835 ADM2Q7Z4H4 148 aa9.3□□□□□ -0.92
TM9SF1-203ENST00000524835 PMAIP1Q13794 54 aa9.27□□□□□ -0.93
TM9SF1-203ENST00000524835 UBR4Q5T4S7 5183 aa9.24□□□□□ -0.93
TM9SF1-203ENST00000524835 A6NN06 94 aa9.23□□□□□ -0.93
TM9SF1-203ENST00000524835 KRTAP13-4Q3LI77 160 aa9.23□□□□□ -0.93
TM9SF1-203ENST00000524835 FLGP20930 4061 aaPredicted RBP9.2□□□□□ -0.94
TM9SF1-203ENST00000524835 RNF213Q63HN8 5207 aa9.18□□□□□ -0.94
TM9SF1-203ENST00000524835 LCE2CQ5TA81 110 aa9.13□□□□□ -0.95
TM9SF1-203ENST00000524835 FAT4Q6V0I7 4981 aa9.07□□□□□ -0.96
TM9SF1-203ENST00000524835 A0A0D9SG42 100 aa9.03□□□□□ -0.96
TM9SF1-203ENST00000524835 M0QZ58 72 aa9.03□□□□□ -0.96
TM9SF1-203ENST00000524835 KTN1-AS1Q86SY8 53 aa8.97□□□□□ -0.97
TM9SF1-203ENST00000524835 LORP23490 312 aaPredicted RBP8.96□□□□□ -0.97
TM9SF1-203ENST00000524835 K7ERS5 55 aa8.93□□□□□ -0.98
TM9SF1-203ENST00000524835 R4GN34 69 aa8.93□□□□□ -0.98
TM9SF1-203ENST00000524835 MT1HP80294 61 aa8.9□□□□□ -0.98
TM9SF1-203ENST00000524835 KRTAP12-1P59990 96 aa8.86□□□□□ -0.99
TM9SF1-203ENST00000524835 KRTAP12-2P59991 146 aa8.86□□□□□ -0.99
TM9SF1-203ENST00000524835 LINC01554Q52M75 96 aa8.8□□□□□ -1
TM9SF1-203ENST00000524835 M0R2T5 61 aa8.79□□□□□ -1
TM9SF1-203ENST00000524835 SPINT4Q6UDR6 99 aa8.78□□□□□ -1
TM9SF1-203ENST00000524835 CRIPTQ9P021 101 aa8.74□□□□□ -1.01
TM9SF1-203ENST00000524835 PRAC1Q96KF2 57 aa8.72□□□□□ -1.01
TM9SF1-203ENST00000524835 ROMO1P60602 79 aa8.66□□□□□ -1.02
TM9SF1-203ENST00000524835 MT2AP02795 61 aa8.62□□□□□ -1.03
TM9SF1-203ENST00000524835 KRTAP9-8Q9BYQ0 159 aa8.62□□□□□ -1.03
TM9SF1-203ENST00000524835 MT1FP04733 61 aa8.58□□□□□ -1.04
TM9SF1-203ENST00000524835 SPRR2GQ9BYE4 73 aa8.56□□□□□ -1.04
TM9SF1-203ENST00000524835 KRTAP19-1Q8IUB9 90 aa8.53□□□□□ -1.04
TM9SF1-203ENST00000524835 KRTAP10-10P60014 251 aa8.52□□□□□ -1.05
TM9SF1-203ENST00000524835 KRTAP25-1Q3LHN0 102 aa8.42□□□□□ -1.06
TM9SF1-203ENST00000524835 CAMK2N1Q7Z7J9 78 aa8.39□□□□□ -1.07
TM9SF1-203ENST00000524835 LCE2AQ5TA79 106 aaPredicted RBP8.38□□□□□ -1.07
TM9SF1-203ENST00000524835 C10orf95Q9H7T3 257 aa8.38□□□□□ -1.07
TM9SF1-203ENST00000524835 KRTAP9-3Q9BYQ3 159 aa8.29□□□□□ -1.08
TM9SF1-203ENST00000524835 KRTAP19-8Q3LI54 63 aa8.29□□□□□ -1.08
TM9SF1-203ENST00000524835 PLAC4Q8WY50 150 aa8.27□□□□□ -1.09
TM9SF1-203ENST00000524835 MT1BP07438 61 aa8.18□□□□□ -1.1
TM9SF1-203ENST00000524835 LCE2BO14633 110 aa8.03□□□□□ -1.12
TM9SF1-203ENST00000524835 TNP1P09430 55 aa8.01□□□□□ -1.13
TM9SF1-203ENST00000524835 MT1XP80297 61 aa7.97□□□□□ -1.13
TM9SF1-203ENST00000524835 KRTAP10-5P60370 271 aa7.97□□□□□ -1.13
TM9SF1-203ENST00000524835 PP632Q6XCG6 107 aa7.91□□□□□ -1.14
TM9SF1-203ENST00000524835 KRTAP23-1A1A580 65 aa7.84□□□□□ -1.15
TM9SF1-203ENST00000524835 USH2AO75445 5202 aa7.84□□□□□ -1.15
TM9SF1-203ENST00000524835 PRO2289Q9P1D8 64 aa7.78□□□□□ -1.16
TM9SF1-203ENST00000524835 LCE3AQ5TA76 89 aa7.68□□□□□ -1.18
TM9SF1-203ENST00000524835 KRTAP10-7P60409 375 aaPredicted RBP7.68□□□□□ -1.18
TM9SF1-203ENST00000524835 KRTAP10-12P60413 245 aa7.62□□□□□ -1.19
TM9SF1-203ENST00000524835 SSPOA2VEC9 5147 aa7.55□□□□□ -1.2
TM9SF1-203ENST00000524835 KRTAP15-1Q3LI76 137 aa7.53□□□□□ -1.2
TM9SF1-203ENST00000524835 KRTAP8-1Q8IUC2 63 aa7.53□□□□□ -1.2
TM9SF1-203ENST00000524835 LCE2DQ5TA82 110 aaPredicted RBP7.47□□□□□ -1.21
TM9SF1-203ENST00000524835 KRTAP19-6Q3LI70 58 aa7.45□□□□□ -1.22
TM9SF1-203ENST00000524835 FSIP2Q5CZC0 6907 aa7.42□□□□□ -1.22
TM9SF1-203ENST00000524835 KRTAP12-3P60328 96 aa7.35□□□□□ -1.23
TM9SF1-203ENST00000524835 KMT2DO14686 5537 aa7.34□□□□□ -1.23
TM9SF1-203ENST00000524835 KRTAP4-8A0A0G2JLE6 195 aa7.32□□□□□ -1.24
TM9SF1-203ENST00000524835 KRTAP4-8Q9BYQ9 185 aa7.32□□□□□ -1.24
TM9SF1-203ENST00000524835 KRTAP19-5Q3LI72 72 aa7.25□□□□□ -1.25
TM9SF1-203ENST00000524835 SPRR5A0A1B0GTR4 108 aa7.17□□□□□ -1.26
TM9SF1-203ENST00000524835 FCGBPQ9Y6R7 5405 aaPredicted RBP7.16□□□□□ -1.26
TM9SF1-203ENST00000524835 KRTAP19-7Q3SYF9 63 aa7.12□□□□□ -1.27
TM9SF1-203ENST00000524835 KRTAP9-2Q9BYQ4 174 aa7.07□□□□□ -1.28
TM9SF1-203ENST00000524835 NDUFAF8A1L188 74 aa7.04□□□□□ -1.28
TM9SF1-203ENST00000524835 LUZP6Q538Z0 58 aa6.97□□□□□ -1.29
TM9SF1-203ENST00000524835 MT1EP04732 61 aa6.96□□□□□ -1.3
TM9SF1-203ENST00000524835 LCE3CQ5T5A8 94 aa6.89□□□□□ -1.31
TM9SF1-203ENST00000524835 MT1LQ93083 61 aa6.86□□□□□ -1.31
TM9SF1-203ENST00000524835 CRCT1Q9UGL9 99 aa6.85□□□□□ -1.31
TM9SF1-203ENST00000524835 MACF1Q9UPN3 7388 aaKnown RBP6.82□□□□□ -1.32
TM9SF1-203ENST00000524835 KRTAP19-4Q3LI73 84 aa6.78□□□□□ -1.32
TM9SF1-203ENST00000524835 H3BS24 57 aa6.74□□□□□ -1.33
TM9SF1-203ENST00000524835 KRTAP4-7Q9BYR0 210 aa6.72□□□□□ -1.33
TM9SF1-203ENST00000524835 MUC12Q9UKN1 5478 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms