RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 LCE4AQ5TA78 99 aa6.82□□□□□ -1.32
PVT1-220ENST00000524165 LCE5AQ5TCM9 118 aa6.82□□□□□ -1.32
PVT1-220ENST00000524165 K7ERJ3 54 aa6.81□□□□□ -1.32
PVT1-220ENST00000524165 A0A087WVE0 104 aa6.8□□□□□ -1.32
PVT1-220ENST00000524165 PAM16Q9Y3D7 125 aa6.8□□□□□ -1.32
PVT1-220ENST00000524165 SCGB1C2P0DMR2 95 aa6.76□□□□□ -1.33
PVT1-220ENST00000524165 ADM2Q7Z4H4 148 aa6.76□□□□□ -1.33
PVT1-220ENST00000524165 SPATA45Q537H7 98 aa6.75□□□□□ -1.33
PVT1-220ENST00000524165 C14orf132Q9NPU4 83 aa6.75□□□□□ -1.33
PVT1-220ENST00000524165 BPY2O14599 106 aa6.73□□□□□ -1.33
PVT1-220ENST00000524165 NDUFC1O43677 76 aa6.69□□□□□ -1.34
PVT1-220ENST00000524165 Q8N9L7 120 aa6.68□□□□□ -1.34
PVT1-220ENST00000524165 R4GN34 69 aa6.68□□□□□ -1.34
PVT1-220ENST00000524165 KRTAP19-3Q7Z4W3 81 aa6.67□□□□□ -1.34
PVT1-220ENST00000524165 LOC105371267A0A1B0GV96 52 aa6.66□□□□□ -1.34
PVT1-220ENST00000524165 HSD52Q0P140 79 aa6.66□□□□□ -1.34
PVT1-220ENST00000524165 VAMP8Q9BV40 100 aa6.64□□□□□ -1.35
PVT1-220ENST00000524165 ATXN8Q156A1 80 aa6.63□□□□□ -1.35
PVT1-220ENST00000524165 KRTAP5-3Q6L8H2 238 aa6.63□□□□□ -1.35
PVT1-220ENST00000524165 TMA7Q9Y2S6 64 aaKnown RBP6.63□□□□□ -1.35
PVT1-220ENST00000524165 SPRR5A0A1B0GTR4 108 aa6.61□□□□□ -1.35
PVT1-220ENST00000524165 CYSTM1Q9H1C7 97 aa6.59□□□□□ -1.35
PVT1-220ENST00000524165 M0QZ58 72 aa6.57□□□□□ -1.36
PVT1-220ENST00000524165 S100A6P06703 90 aa6.56□□□□□ -1.36
PVT1-220ENST00000524165 KRTAP4-6Q9BYQ5 205 aa6.55□□□□□ -1.36
PVT1-220ENST00000524165 KRTAP19-7Q3SYF9 63 aa6.54□□□□□ -1.36
PVT1-220ENST00000524165 CYP4F30PQ9H0H9 118 aa6.54□□□□□ -1.36
PVT1-220ENST00000524165 MT1EP04732 61 aa6.53□□□□□ -1.36
PVT1-220ENST00000524165 KRTAP5-4Q6L8H1 288 aa6.53□□□□□ -1.36
PVT1-220ENST00000524165 TP53AIP1Q9HCN2 124 aa6.53□□□□□ -1.36
PVT1-220ENST00000524165 LINC01554Q52M75 96 aa6.51□□□□□ -1.37
PVT1-220ENST00000524165 NAA38Q9BRA0 125 aaKnown RBP6.5□□□□□ -1.37
PVT1-220ENST00000524165 C20orf197Q8N268 126 aa6.49□□□□□ -1.37
PVT1-220ENST00000524165 P0C880 135 aa6.48□□□□□ -1.37
PVT1-220ENST00000524165 K7EP34 96 aa6.43□□□□□ -1.38
PVT1-220ENST00000524165 MT1GP13640 62 aa6.42□□□□□ -1.38
PVT1-220ENST00000524165 PP632Q6XCG6 107 aa6.38□□□□□ -1.39
PVT1-220ENST00000524165 ACYP1P07311 99 aa6.37□□□□□ -1.39
PVT1-220ENST00000524165 LOC101927531A0A1B0GV80 90 aa6.35□□□□□ -1.39
PVT1-220ENST00000524165 PCP4L1A6NKN8 68 aa6.34□□□□□ -1.39
PVT1-220ENST00000524165 TRAV22A0A0B4J277 110 aa6.33□□□□□ -1.4
PVT1-220ENST00000524165 SMIM6P0DI80 62 aa6.33□□□□□ -1.4
PVT1-220ENST00000524165 BATFQ16520 125 aa6.28□□□□□ -1.4
PVT1-220ENST00000524165 MT1MQ8N339 61 aa6.28□□□□□ -1.4
PVT1-220ENST00000524165 KRTAP3-2Q9BYR7 98 aa6.28□□□□□ -1.4
PVT1-220ENST00000524165 UQCR10Q9UDW1 63 aa6.27□□□□□ -1.41
PVT1-220ENST00000524165 H3BT86 120 aa6.23□□□□□ -1.41
PVT1-220ENST00000524165 TSTD3H0UI37 97 aa6.22□□□□□ -1.41
PVT1-220ENST00000524165 UBL5Q9BZL1 73 aa6.22□□□□□ -1.41
PVT1-220ENST00000524165 KRTAP20-2Q3LI61 65 aa6.21□□□□□ -1.42
PVT1-220ENST00000524165 MT-ATP8P03928 68 aa6.2□□□□□ -1.42
PVT1-220ENST00000524165 KRTAP4-3Q9BYR4 195 aa6.14□□□□□ -1.43
PVT1-220ENST00000524165 KRTAP19-5Q3LI72 72 aa6.13□□□□□ -1.43
PVT1-220ENST00000524165 PYY3Q5JQD4 70 aa6.13□□□□□ -1.43
PVT1-220ENST00000524165 AHNAKQ09666 5890 aaKnown RBP6.11□□□□□ -1.43
PVT1-220ENST00000524165 A0A1W2PPM0 123 aa6.1□□□□□ -1.43
PVT1-220ENST00000524165 SPCS1Q9Y6A9 102 aa6.1□□□□□ -1.43
PVT1-220ENST00000524165 MT1LQ93083 61 aa6.09□□□□□ -1.43
PVT1-220ENST00000524165 M0R143 59 aa6.06□□□□□ -1.44
PVT1-220ENST00000524165 ATOX1O00244 68 aa6.06□□□□□ -1.44
PVT1-220ENST00000524165 A0A1B0GV90 55 aa6.05□□□□□ -1.44
PVT1-220ENST00000524165 H0Y9P7 68 aa6.02□□□□□ -1.45
PVT1-220ENST00000524165 MUC5ACP98088 5654 aa6.01□□□□□ -1.45
PVT1-220ENST00000524165 CAMK2N1Q7Z7J9 78 aa5.99□□□□□ -1.45
PVT1-220ENST00000524165 UQCRQO14949 82 aa5.98□□□□□ -1.45
PVT1-220ENST00000524165 PCP4P48539 62 aa5.98□□□□□ -1.45
PVT1-220ENST00000524165 A0A0D9SG42 100 aa5.97□□□□□ -1.45
PVT1-220ENST00000524165 KRTAP12-4P60329 112 aa5.93□□□□□ -1.46
PVT1-220ENST00000524165 MUC5BQ9HC84 5762 aaPredicted RBP5.92□□□□□ -1.46
PVT1-220ENST00000524165 SVIPQ8NHG7 77 aa5.9□□□□□ -1.46
PVT1-220ENST00000524165 TAX1BP3O14907 124 aa5.89□□□□□ -1.47
PVT1-220ENST00000524165 KRTAP4-11Q9BYQ6 195 aa5.89□□□□□ -1.47
PVT1-220ENST00000524165 KRTAP5-5Q701N2 237 aaPredicted RBP5.86□□□□□ -1.47
PVT1-220ENST00000524165 COL5A1-AS1Q5SY13 56 aa5.84□□□□□ -1.47
PVT1-220ENST00000524165 LINC00208Q96KT6 92 aa5.84□□□□□ -1.47
PVT1-220ENST00000524165 C9orf118A6NHY6 69 aa5.83□□□□□ -1.48
PVT1-220ENST00000524165 DMAC1Q96GE9 116 aa5.82□□□□□ -1.48
PVT1-220ENST00000524165 SYNE1Q8NF91 8797 aaKnown RBP5.76□□□□□ -1.49
PVT1-220ENST00000524165 KRTAP5-8O75690 187 aa5.75□□□□□ -1.49
PVT1-220ENST00000524165 K7ERU9 68 aa5.73□□□□□ -1.49
PVT1-220ENST00000524165 KRTAP4-7Q9BYR0 210 aa5.72□□□□□ -1.49
PVT1-220ENST00000524165 KRTAP13-4Q3LI77 160 aa5.69□□□□□ -1.5
PVT1-220ENST00000524165 TRAV7A0A075B6U4 112 aa5.68□□□□□ -1.5
PVT1-220ENST00000524165 SCGB1A1P11684 91 aa5.68□□□□□ -1.5
PVT1-220ENST00000524165 MP68P56378 58 aa5.67□□□□□ -1.5
PVT1-220ENST00000524165 C10orf95Q9H7T3 257 aa5.66□□□□□ -1.5
PVT1-220ENST00000524165 PRO0461Q9UI25 63 aa5.64□□□□□ -1.51
PVT1-220ENST00000524165 SPTSSBQ8NFR3 76 aa5.63□□□□□ -1.51
PVT1-220ENST00000524165 HIST1H4AP62805 103 aaKnown RBP5.61□□□□□ -1.51
PVT1-220ENST00000524165 GTF2H5Q6ZYL4 71 aa5.61□□□□□ -1.51
PVT1-220ENST00000524165 KRTAP9-9Q9BYP9 154 aa5.58□□□□□ -1.52
PVT1-220ENST00000524165 KRTAP5-2Q701N4 177 aa5.57□□□□□ -1.52
PVT1-220ENST00000524165 J3QR89 54 aa5.56□□□□□ -1.52
PVT1-220ENST00000524165 LCE3AQ5TA76 89 aa5.55□□□□□ -1.52
PVT1-220ENST00000524165 ATP5EP2Q5VTU8 51 aa5.53□□□□□ -1.52
PVT1-220ENST00000524165 OCR1Q9BZK8 76 aa5.52□□□□□ -1.53
PVT1-220ENST00000524165 ACYP2P14621 99 aa5.51□□□□□ -1.53
PVT1-220ENST00000524165 H3BPC8 53 aa5.5□□□□□ -1.53
PVT1-220ENST00000524165 LOC100996750A0A140TA64 210 aa5.47□□□□□ -1.53
PVT1-220ENST00000524165 F8W1H4 67 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms