RNA–Protein interactions for RNA: ENST00000521710.1

NPM1-209, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-209ENST00000521710 ST20Q9HBF5 79 aa0.18□□□□□ -2.38
NPM1-209ENST00000521710 SPANXA1Q9NS26 97 aa0.18□□□□□ -2.38
NPM1-209ENST00000521710 PSENENQ9NZ42 101 aa0.18□□□□□ -2.38
NPM1-209ENST00000521710 GSKIPQ9P0R6 139 aa0.18□□□□□ -2.38
NPM1-209ENST00000521710 IFI27P40305 119 aaPredicted RBP0.17□□□□□ -2.38
NPM1-209ENST00000521710 SEC11AP67812 179 aa0.17□□□□□ -2.38
NPM1-209ENST00000521710 COX17Q14061 63 aa0.17□□□□□ -2.38
NPM1-209ENST00000521710 Q5BKY6 102 aa0.17□□□□□ -2.38
NPM1-209ENST00000521710 S100A7L2Q5SY68 101 aa0.17□□□□□ -2.38
NPM1-209ENST00000521710 Q6JHZ5 121 aa0.17□□□□□ -2.38
NPM1-209ENST00000521710 MGST2Q99735 147 aa0.17□□□□□ -2.38
NPM1-209ENST00000521710 SMIM3Q9BZL3 60 aa0.17□□□□□ -2.38
NPM1-209ENST00000521710 BATF3Q9NR55 127 aa0.17□□□□□ -2.38
NPM1-209ENST00000521710 SPANXCQ9NY87 97 aa0.17□□□□□ -2.38
NPM1-209ENST00000521710 A0A087WVE0 104 aa0.16□□□□□ -2.38
NPM1-209ENST00000521710 TRBV10-3A0A0K0K1G6 114 aa0.16□□□□□ -2.38
NPM1-209ENST00000521710 SSSCA1O60232 199 aa0.16□□□□□ -2.38
NPM1-209ENST00000521710 PPP1R17O96001 155 aa0.16□□□□□ -2.38
NPM1-209ENST00000521710 CRIP1P50238 77 aa0.16□□□□□ -2.38
NPM1-209ENST00000521710 COX7B2Q8TF08 81 aa0.16□□□□□ -2.38
NPM1-209ENST00000521710 RPL39LQ96EH5 51 aaKnown RBP0.16□□□□□ -2.38
NPM1-209ENST00000521710 ERG28Q9UKR5 140 aa0.16□□□□□ -2.38
NPM1-209ENST00000521710 A0A087WXM4 84 aa0.15□□□□□ -2.39
NPM1-209ENST00000521710 TRAV13-2A0A0B4J235 113 aa0.15□□□□□ -2.39
NPM1-209ENST00000521710 UBE2L5PA0A1B0GUS4 154 aa0.15□□□□□ -2.39
NPM1-209ENST00000521710 TCRBV3S1A0A5B6 114 aa0.15□□□□□ -2.39
NPM1-209ENST00000521710 EFCAB10A6NFE3 127 aa0.15□□□□□ -2.39
NPM1-209ENST00000521710 F2Z2F3 143 aa0.15□□□□□ -2.39
NPM1-209ENST00000521710 LINC00158P58513 81 aa0.15□□□□□ -2.39
NPM1-209ENST00000521710 LINC01545Q5VT33 79 aa0.15□□□□□ -2.39
NPM1-209ENST00000521710 SFTA2Q6UW10 78 aa0.15□□□□□ -2.39
NPM1-209ENST00000521710 FAM167A-AS1Q96KT0 104 aa0.15□□□□□ -2.39
NPM1-209ENST00000521710 SAR1AQ9NR31 198 aa0.15□□□□□ -2.39
NPM1-209ENST00000521710 NDUFC1O43677 76 aa0.14□□□□□ -2.39
NPM1-209ENST00000521710 GNG11P61952 73 aa0.14□□□□□ -2.39
NPM1-209ENST00000521710 VPS25Q9BRG1 176 aa0.14□□□□□ -2.39
NPM1-209ENST00000521710 IGLV5-48A0A075B6I7 105 aa0.13□□□□□ -2.39
NPM1-209ENST00000521710 SMIM31A0A1B0GVY4 71 aa0.13□□□□□ -2.39
NPM1-209ENST00000521710 S100PP25815 95 aa0.13□□□□□ -2.39
NPM1-209ENST00000521710 RPL39P62891 51 aaKnown RBP0.13□□□□□ -2.39
NPM1-209ENST00000521710 MEIG1Q5JSS6 88 aa0.13□□□□□ -2.39
NPM1-209ENST00000521710 S100A16Q96FQ6 103 aaKnown RBP0.13□□□□□ -2.39
NPM1-209ENST00000521710 TMEM167BQ9NRX6 74 aa0.13□□□□□ -2.39
NPM1-209ENST00000521710 CDKN2A-AS1Q9UH64 79 aa0.13□□□□□ -2.39
NPM1-209ENST00000521710 LINC00587B1AMM8 73 aa0.12□□□□□ -2.39
NPM1-209ENST00000521710 HCG22E2RYF7 251 aa0.12□□□□□ -2.39
NPM1-209ENST00000521710 COX7BP24311 80 aa0.12□□□□□ -2.39
NPM1-209ENST00000521710 POLR2KP53803 58 aaKnown RBP0.12□□□□□ -2.39
NPM1-209ENST00000521710 WHAMMP3Q1A5X7 153 aa0.12□□□□□ -2.39
NPM1-209ENST00000521710 LINC00472Q9H8W2 130 aa0.12□□□□□ -2.39
NPM1-209ENST00000521710 SCP2D1Q9UJQ7 156 aa0.12□□□□□ -2.39
NPM1-209ENST00000521710 NDUFB1O75438 58 aa0.11□□□□□ -2.39
NPM1-209ENST00000521710 SPINK8P0C7L1 97 aa0.11□□□□□ -2.39
NPM1-209ENST00000521710 MUSTN1Q8IVN3 82 aa0.11□□□□□ -2.39
NPM1-209ENST00000521710 DEFB107AQ8IZN7 70 aa0.11□□□□□ -2.39
NPM1-209ENST00000521710 CCDC179H3BU77 68 aa0.1□□□□□ -2.39
NPM1-209ENST00000521710 K7ERU9 68 aa0.1□□□□□ -2.39
NPM1-209ENST00000521710 SFT2D2O95562 160 aa0.1□□□□□ -2.39
NPM1-209ENST00000521710 GCHFRP30047 84 aa0.1□□□□□ -2.39
NPM1-209ENST00000521710 MRPL54Q6P161 138 aaKnown RBP0.1□□□□□ -2.39
NPM1-209ENST00000521710 BAGE2Q86Y30 109 aa0.1□□□□□ -2.39
NPM1-209ENST00000521710 PPP1R1CQ8WVI7 109 aa0.1□□□□□ -2.39
NPM1-209ENST00000521710 C20orf78Q9BR46 151 aa0.1□□□□□ -2.39
NPM1-209ENST00000521710 TCEAL7Q9BRU2 100 aa0.1□□□□□ -2.39
NPM1-209ENST00000521710 SNHG12Q9BXW3 62 aa0.1□□□□□ -2.39
NPM1-209ENST00000521710 SMIM13P0DJ93 91 aa0.09□□□□□ -2.4
NPM1-209ENST00000521710 SSBP1Q04837 148 aaKnown RBP0.09□□□□□ -2.4
NPM1-209ENST00000521710 RPL7L1Q6DKI1 246 aaKnown RBP0.09□□□□□ -2.4
NPM1-209ENST00000521710 C9orf62Q8N4C0 152 aa0.09□□□□□ -2.4
NPM1-209ENST00000521710 PRR15LQ9BU68 103 aa0.09□□□□□ -2.4
NPM1-209ENST00000521710 CNFNQ9BYD5 112 aa0.09□□□□□ -2.4
NPM1-209ENST00000521710 hADV29S1A0JD25 119 aa0.08□□□□□ -2.4
NPM1-209ENST00000521710 J3QR89 54 aa0.08□□□□□ -2.4
NPM1-209ENST00000521710 S100A8P05109 93 aa0.08□□□□□ -2.4
NPM1-209ENST00000521710 TNP1P09430 55 aa0.08□□□□□ -2.4
NPM1-209ENST00000521710 AKAIN1P0CW23 69 aa0.08□□□□□ -2.4
NPM1-209ENST00000521710 MRPS10P82664 201 aaKnown RBP0.08□□□□□ -2.4
NPM1-209ENST00000521710 FAM25AB3EWG3 89 aa0.07□□□□□ -2.4
NPM1-209ENST00000521710 FAM25CB3EWG5 89 aa0.07□□□□□ -2.4
NPM1-209ENST00000521710 FAM25GB3EWG6 89 aa0.07□□□□□ -2.4
NPM1-209ENST00000521710 H3BUT2 72 aa0.07□□□□□ -2.4
NPM1-209ENST00000521710 FAUP35544 74 aaKnown RBP0.07□□□□□ -2.4
NPM1-209ENST00000521710 TMEM170BQ5T4T1 132 aa0.07□□□□□ -2.4
NPM1-209ENST00000521710 SMIM11BQ8TCY0 68 aa0.07□□□□□ -2.4
NPM1-209ENST00000521710 C12orf57Q99622 126 aa0.07□□□□□ -2.4
NPM1-209ENST00000521710 MRPL34Q9BQ48 92 aaKnown RBP0.07□□□□□ -2.4
NPM1-209ENST00000521710 SPANXDQ9BXN6 97 aa0.07□□□□□ -2.4
NPM1-209ENST00000521710 V9GYV3 84 aa0.07□□□□□ -2.4
NPM1-209ENST00000521710 MYMXA0A1B0GTQ4 84 aa0.06□□□□□ -2.4
NPM1-209ENST00000521710 A0A1B0GUT8 65 aa0.06□□□□□ -2.4
NPM1-209ENST00000521710 LINC01549A6NIU2 74 aa0.06□□□□□ -2.4
NPM1-209ENST00000521710 SNCGO76070 127 aa0.06□□□□□ -2.4
NPM1-209ENST00000521710 GNG4P50150 75 aa0.06□□□□□ -2.4
NPM1-209ENST00000521710 C8orf59Q8N0T1 100 aaPredicted RBP0.06□□□□□ -2.4
NPM1-209ENST00000521710 TRBV7-4A0A0J9YYF1 115 aa0.05□□□□□ -2.4
NPM1-209ENST00000521710 MMP24-AS1A0A0U1RRL7 71 aa0.05□□□□□ -2.4
NPM1-209ENST00000521710 CTXND1A0A1B0GTU2 59 aa0.05□□□□□ -2.4
NPM1-209ENST00000521710 NAP1L6A6NFF2 107 aa0.05□□□□□ -2.4
NPM1-209ENST00000521710 IGIPA6NJ69 53 aa0.05□□□□□ -2.4
NPM1-209ENST00000521710 K7EMI3 77 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms