RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 FCGBPQ9Y6R7 5405 aaPredicted RBP6.47□□□□□ -1.37
VEGFA-221ENST00000520265 KLKP1Q107X0 134 aa6.46□□□□□ -1.38
VEGFA-221ENST00000520265 KRTAP3-3Q9BYR6 98 aa6.46□□□□□ -1.38
VEGFA-221ENST00000520265 KRTAP19-6Q3LI70 58 aa6.44□□□□□ -1.38
VEGFA-221ENST00000520265 KRTAP9-7A8MTY7 169 aa6.43□□□□□ -1.38
VEGFA-221ENST00000520265 A8MUN3 132 aa6.42□□□□□ -1.38
VEGFA-221ENST00000520265 IMUPQ9GZP8 106 aa6.4□□□□□ -1.38
VEGFA-221ENST00000520265 Q5VV11 94 aa6.39□□□□□ -1.39
VEGFA-221ENST00000520265 H3BPC8 53 aa6.38□□□□□ -1.39
VEGFA-221ENST00000520265 K7ERU9 68 aa6.37□□□□□ -1.39
VEGFA-221ENST00000520265 MT-ATP8P03928 68 aa6.35□□□□□ -1.39
VEGFA-221ENST00000520265 SPRR2GQ9BYE4 73 aa6.34□□□□□ -1.39
VEGFA-221ENST00000520265 ADM2Q7Z4H4 148 aa6.32□□□□□ -1.4
VEGFA-221ENST00000520265 CRIPTQ9P021 101 aa6.31□□□□□ -1.4
VEGFA-221ENST00000520265 A6NN06 94 aa6.3□□□□□ -1.4
VEGFA-221ENST00000520265 MT1BP07438 61 aa6.29□□□□□ -1.4
VEGFA-221ENST00000520265 KRTAP19-8Q3LI54 63 aa6.28□□□□□ -1.4
VEGFA-221ENST00000520265 H0YAA0 97 aa6.27□□□□□ -1.41
VEGFA-221ENST00000520265 DMAC1Q96GE9 116 aa6.27□□□□□ -1.41
VEGFA-221ENST00000520265 MACF1Q9UPN3 7388 aaKnown RBP6.27□□□□□ -1.41
VEGFA-221ENST00000520265 SMIM20Q8N5G0 67 aa6.26□□□□□ -1.41
VEGFA-221ENST00000520265 SYNE2Q8WXH0 6885 aaKnown RBP6.25□□□□□ -1.41
VEGFA-221ENST00000520265 TRAV7A0A075B6U4 112 aa6.25□□□□□ -1.41
VEGFA-221ENST00000520265 C20orf197Q8N268 126 aa6.19□□□□□ -1.42
VEGFA-221ENST00000520265 ACYP2P14621 99 aa6.17□□□□□ -1.42
VEGFA-221ENST00000520265 SNURFQ9Y675 71 aa6.17□□□□□ -1.42
VEGFA-221ENST00000520265 R4GN34 69 aa6.17□□□□□ -1.42
VEGFA-221ENST00000520265 CHKB-CPT1BH3BT56 60 aa6.16□□□□□ -1.42
VEGFA-221ENST00000520265 P0C880 135 aa6.15□□□□□ -1.42
VEGFA-221ENST00000520265 KRTAP10-5P60370 271 aa6.15□□□□□ -1.42
VEGFA-221ENST00000520265 M0QZ58 72 aa6.13□□□□□ -1.43
VEGFA-221ENST00000520265 SPTSSBQ8NFR3 76 aa6.13□□□□□ -1.43
VEGFA-221ENST00000520265 LINC01554Q52M75 96 aa6.1□□□□□ -1.43
VEGFA-221ENST00000520265 PLAC4Q8WY50 150 aa6.1□□□□□ -1.43
VEGFA-221ENST00000520265 KRTAP6-3Q3LI67 103 aa6.08□□□□□ -1.44
VEGFA-221ENST00000520265 SERP2Q8N6R1 65 aa6.06□□□□□ -1.44
VEGFA-221ENST00000520265 PRO2289Q9P1D8 64 aa6.04□□□□□ -1.44
VEGFA-221ENST00000520265 KRTAP3-2Q9BYR7 98 aa6.03□□□□□ -1.44
VEGFA-221ENST00000520265 SPANXA2-OT1Q8N9U9 137 aa5.99□□□□□ -1.45
VEGFA-221ENST00000520265 MT1XP80297 61 aa5.93□□□□□ -1.46
VEGFA-221ENST00000520265 COX7CP15954 63 aa5.89□□□□□ -1.47
VEGFA-221ENST00000520265 COA5Q86WW8 74 aa5.89□□□□□ -1.47
VEGFA-221ENST00000520265 NEBP20929 6669 aa5.84□□□□□ -1.48
VEGFA-221ENST00000520265 SEC61GP60059 68 aa5.83□□□□□ -1.48
VEGFA-221ENST00000520265 KRTAP5-9P26371 169 aa5.8□□□□□ -1.48
VEGFA-221ENST00000520265 MUC12Q9UKN1 5478 aa5.8□□□□□ -1.48
VEGFA-221ENST00000520265 KRTAP8-1Q8IUC2 63 aa5.79□□□□□ -1.48
VEGFA-221ENST00000520265 ANAPC13Q9BS18 74 aa5.79□□□□□ -1.48
VEGFA-221ENST00000520265 SERP1Q9Y6X1 66 aa5.79□□□□□ -1.48
VEGFA-221ENST00000520265 SPRR2FQ96RM1 72 aa5.78□□□□□ -1.48
VEGFA-221ENST00000520265 CYSTM1Q9H1C7 97 aa5.77□□□□□ -1.49
VEGFA-221ENST00000520265 H7BZZ5 65 aa5.76□□□□□ -1.49
VEGFA-221ENST00000520265 KMT2DO14686 5537 aa5.76□□□□□ -1.49
VEGFA-221ENST00000520265 KRTAP13-4Q3LI77 160 aa5.75□□□□□ -1.49
VEGFA-221ENST00000520265 KRTAP12-2P59991 146 aa5.74□□□□□ -1.49
VEGFA-221ENST00000520265 CAMK2N1Q7Z7J9 78 aa5.73□□□□□ -1.49
VEGFA-221ENST00000520265 A0A0D9SG42 100 aa5.71□□□□□ -1.5
VEGFA-221ENST00000520265 SPRR2EP22531 72 aa5.69□□□□□ -1.5
VEGFA-221ENST00000520265 SPRR2BP35325 72 aa5.69□□□□□ -1.5
VEGFA-221ENST00000520265 SPRR2AP35326 72 aa5.69□□□□□ -1.5
VEGFA-221ENST00000520265 KRTAP10-7P60409 375 aaPredicted RBP5.69□□□□□ -1.5
VEGFA-221ENST00000520265 KRTAP4-8A0A0G2JLE6 195 aa5.67□□□□□ -1.5
VEGFA-221ENST00000520265 KRTAP20-1Q3LI63 56 aa5.67□□□□□ -1.5
VEGFA-221ENST00000520265 KRTAP4-8Q9BYQ9 185 aa5.67□□□□□ -1.5
VEGFA-221ENST00000520265 MDN1Q9NU22 5596 aa5.67□□□□□ -1.5
VEGFA-221ENST00000520265 A0A1B0GU33 70 aa5.65□□□□□ -1.5
VEGFA-221ENST00000520265 SPATA8Q6RVD6 105 aa5.65□□□□□ -1.5
VEGFA-221ENST00000520265 CCDC179H3BU77 68 aa5.63□□□□□ -1.51
VEGFA-221ENST00000520265 A0A1B0GU69 56 aa5.62□□□□□ -1.51
VEGFA-221ENST00000520265 SPINT4Q6UDR6 99 aa5.62□□□□□ -1.51
VEGFA-221ENST00000520265 KRTAP10-12P60413 245 aa5.61□□□□□ -1.51
VEGFA-221ENST00000520265 ATP5EP56381 51 aaPredicted RBP5.54□□□□□ -1.52
VEGFA-221ENST00000520265 LCE1AQ5T7P2 110 aa5.53□□□□□ -1.52
VEGFA-221ENST00000520265 SMIM26A0A096LP01 95 aa5.5□□□□□ -1.53
VEGFA-221ENST00000520265 KRTAP2-3P0C7H8 128 aa5.5□□□□□ -1.53
VEGFA-221ENST00000520265 SPRR2DP22532 72 aa5.5□□□□□ -1.53
VEGFA-221ENST00000520265 KRTAP2-4Q9BYR9 128 aa5.5□□□□□ -1.53
VEGFA-221ENST00000520265 PRR15LQ9BU68 103 aa5.48□□□□□ -1.53
VEGFA-221ENST00000520265 KRTAP12-1P59990 96 aa5.47□□□□□ -1.53
VEGFA-221ENST00000520265 A8MU10 97 aa5.46□□□□□ -1.54
VEGFA-221ENST00000520265 TMEM258P61165 79 aa5.42□□□□□ -1.54
VEGFA-221ENST00000520265 LINC01558Q9Y6Z2 57 aa5.35□□□□□ -1.55
VEGFA-221ENST00000520265 KRTAP2-2Q9BYT5 123 aa5.33□□□□□ -1.56
VEGFA-221ENST00000520265 KRTAP2-1Q9BYU5 128 aa5.33□□□□□ -1.56
VEGFA-221ENST00000520265 LCE3BQ5TA77 95 aa5.31□□□□□ -1.56
VEGFA-221ENST00000520265 KRTAP19-7Q3SYF9 63 aa5.27□□□□□ -1.57
VEGFA-221ENST00000520265 UQCR11O14957 56 aa5.26□□□□□ -1.57
VEGFA-221ENST00000520265 MT1EP04732 61 aa5.26□□□□□ -1.57
VEGFA-221ENST00000520265 TNP1P09430 55 aa5.25□□□□□ -1.57
VEGFA-221ENST00000520265 KRTAP19-5Q3LI72 72 aa5.24□□□□□ -1.57
VEGFA-221ENST00000520265 C10orf95Q9H7T3 257 aa5.22□□□□□ -1.57
VEGFA-221ENST00000520265 KRTAP19-3Q7Z4W3 81 aa5.21□□□□□ -1.58
VEGFA-221ENST00000520265 MIR22HGQ0VDD5 57 aa5.17□□□□□ -1.58
VEGFA-221ENST00000520265 LCE3AQ5TA76 89 aa5.17□□□□□ -1.58
VEGFA-221ENST00000520265 LCE5AQ5TCM9 118 aa5.17□□□□□ -1.58
VEGFA-221ENST00000520265 PSPHP1O15172 72 aa5.14□□□□□ -1.59
VEGFA-221ENST00000520265 V9GYY9 64 aa5.13□□□□□ -1.59
VEGFA-221ENST00000520265 K7ERS5 55 aa5.12□□□□□ -1.59
VEGFA-221ENST00000520265 PP632Q6XCG6 107 aa5.1□□□□□ -1.59
VEGFA-221ENST00000520265 MT1GP13640 62 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms