RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 A0A087WVE0 104 aa11.16□□□□□ -0.62
VEGFA-220ENST00000519767 IMUPQ9GZP8 106 aa11.16□□□□□ -0.62
VEGFA-220ENST00000519767 A0A1B0GV90 55 aa11.15□□□□□ -0.62
VEGFA-220ENST00000519767 UQCRQO14949 82 aa11.14□□□□□ -0.63
VEGFA-220ENST00000519767 ATP5EP2Q5VTU8 51 aa11.14□□□□□ -0.63
VEGFA-220ENST00000519767 ATOX1O00244 68 aa11.12□□□□□ -0.63
VEGFA-220ENST00000519767 NEBP20929 6669 aa11.11□□□□□ -0.63
VEGFA-220ENST00000519767 FAM240AA0A1B0GVK7 77 aa11.11□□□□□ -0.63
VEGFA-220ENST00000519767 NDUFC1O43677 76 aa11.09□□□□□ -0.63
VEGFA-220ENST00000519767 HIST1H4AP62805 103 aaKnown RBP11.09□□□□□ -0.63
VEGFA-220ENST00000519767 H0Y9P7 68 aa11.06□□□□□ -0.64
VEGFA-220ENST00000519767 H0YAA0 97 aa11.05□□□□□ -0.64
VEGFA-220ENST00000519767 A8MUN3 132 aa11□□□□□ -0.65
VEGFA-220ENST00000519767 MUC12Q9UKN1 5478 aa10.94□□□□□ -0.66
VEGFA-220ENST00000519767 KRTAP5-9P26371 169 aa10.91□□□□□ -0.66
VEGFA-220ENST00000519767 LINC00643Q86TS7 51 aa10.91□□□□□ -0.66
VEGFA-220ENST00000519767 ADM2Q7Z4H4 148 aa10.88□□□□□ -0.67
VEGFA-220ENST00000519767 LINC00208Q96KT6 92 aa10.88□□□□□ -0.67
VEGFA-220ENST00000519767 MP68P56378 58 aa10.83□□□□□ -0.68
VEGFA-220ENST00000519767 KMT2DO14686 5537 aa10.8□□□□□ -0.68
VEGFA-220ENST00000519767 J3QR89 54 aa10.8□□□□□ -0.68
VEGFA-220ENST00000519767 OCR1Q9BZK8 76 aa10.77□□□□□ -0.69
VEGFA-220ENST00000519767 PRO2289Q9P1D8 64 aa10.77□□□□□ -0.69
VEGFA-220ENST00000519767 KRTAP20-1Q3LI63 56 aa10.75□□□□□ -0.69
VEGFA-220ENST00000519767 PLAC4Q8WY50 150 aa10.71□□□□□ -0.69
VEGFA-220ENST00000519767 MDN1Q9NU22 5596 aa10.7□□□□□ -0.7
VEGFA-220ENST00000519767 C20orf197Q8N268 126 aa10.67□□□□□ -0.7
VEGFA-220ENST00000519767 H3BPC8 53 aa10.66□□□□□ -0.7
VEGFA-220ENST00000519767 R4GN34 69 aa10.65□□□□□ -0.7
VEGFA-220ENST00000519767 MT1XP80297 61 aa10.62□□□□□ -0.71
VEGFA-220ENST00000519767 P0C880 135 aa10.57□□□□□ -0.72
VEGFA-220ENST00000519767 DMAC1Q96GE9 116 aa10.56□□□□□ -0.72
VEGFA-220ENST00000519767 M0QZ58 72 aa10.53□□□□□ -0.72
VEGFA-220ENST00000519767 SPRR2FQ96RM1 72 aa10.53□□□□□ -0.72
VEGFA-220ENST00000519767 SCGB1A1P11684 91 aa10.52□□□□□ -0.73
VEGFA-220ENST00000519767 K7ERU9 68 aa10.51□□□□□ -0.73
VEGFA-220ENST00000519767 KRTAP2-3P0C7H8 128 aa10.47□□□□□ -0.73
VEGFA-220ENST00000519767 KRTAP2-4Q9BYR9 128 aa10.47□□□□□ -0.73
VEGFA-220ENST00000519767 KRTAP12-2P59991 146 aa10.46□□□□□ -0.73
VEGFA-220ENST00000519767 KRTAP3-2Q9BYR7 98 aa10.46□□□□□ -0.73
VEGFA-220ENST00000519767 KRTAP8-1Q8IUC2 63 aa10.45□□□□□ -0.74
VEGFA-220ENST00000519767 SPRR2EP22531 72 aa10.41□□□□□ -0.74
VEGFA-220ENST00000519767 SPRR2BP35325 72 aa10.41□□□□□ -0.74
VEGFA-220ENST00000519767 SPRR2AP35326 72 aa10.41□□□□□ -0.74
VEGFA-220ENST00000519767 TRAV7A0A075B6U4 112 aa10.39□□□□□ -0.75
VEGFA-220ENST00000519767 MT-ATP8P03928 68 aa10.38□□□□□ -0.75
VEGFA-220ENST00000519767 LINC01554Q52M75 96 aa10.37□□□□□ -0.75
VEGFA-220ENST00000519767 ACYP2P14621 99 aa10.33□□□□□ -0.76
VEGFA-220ENST00000519767 SPTSSBQ8NFR3 76 aa10.28□□□□□ -0.76
VEGFA-220ENST00000519767 LCE1AQ5T7P2 110 aa10.26□□□□□ -0.77
VEGFA-220ENST00000519767 KRTAP4-8A0A0G2JLE6 195 aa10.21□□□□□ -0.77
VEGFA-220ENST00000519767 SMIM20Q8N5G0 67 aa10.21□□□□□ -0.77
VEGFA-220ENST00000519767 KRTAP4-8Q9BYQ9 185 aa10.21□□□□□ -0.77
VEGFA-220ENST00000519767 KRTAP10-7P60409 375 aaPredicted RBP10.12□□□□□ -0.79
VEGFA-220ENST00000519767 KRTAP10-12P60413 245 aa10.12□□□□□ -0.79
VEGFA-220ENST00000519767 KRTAP2-2Q9BYT5 123 aa10.12□□□□□ -0.79
VEGFA-220ENST00000519767 KRTAP2-1Q9BYU5 128 aa10.12□□□□□ -0.79
VEGFA-220ENST00000519767 CHKB-CPT1BH3BT56 60 aa10.1□□□□□ -0.79
VEGFA-220ENST00000519767 SPRR2DP22532 72 aa10.08□□□□□ -0.8
VEGFA-220ENST00000519767 SERP2Q8N6R1 65 aa9.93□□□□□ -0.82
VEGFA-220ENST00000519767 SNURFQ9Y675 71 aa9.93□□□□□ -0.82
VEGFA-220ENST00000519767 SPANXA2-OT1Q8N9U9 137 aa9.9□□□□□ -0.82
VEGFA-220ENST00000519767 LCE3BQ5TA77 95 aa9.82□□□□□ -0.84
VEGFA-220ENST00000519767 CAMK2N1Q7Z7J9 78 aa9.77□□□□□ -0.85
VEGFA-220ENST00000519767 KRTAP13-4Q3LI77 160 aa9.76□□□□□ -0.85
VEGFA-220ENST00000519767 COX7CP15954 63 aa9.7□□□□□ -0.86
VEGFA-220ENST00000519767 SEC61GP60059 68 aa9.6□□□□□ -0.87
VEGFA-220ENST00000519767 COA5Q86WW8 74 aa9.59□□□□□ -0.87
VEGFA-220ENST00000519767 SERP1Q9Y6X1 66 aa9.58□□□□□ -0.88
VEGFA-220ENST00000519767 ANAPC13Q9BS18 74 aa9.54□□□□□ -0.88
VEGFA-220ENST00000519767 H7BZZ5 65 aa9.49□□□□□ -0.89
VEGFA-220ENST00000519767 KRTAP19-7Q3SYF9 63 aa9.49□□□□□ -0.89
VEGFA-220ENST00000519767 CYSTM1Q9H1C7 97 aa9.49□□□□□ -0.89
VEGFA-220ENST00000519767 A0A0D9SG42 100 aa9.48□□□□□ -0.89
VEGFA-220ENST00000519767 LCE5AQ5TCM9 118 aa9.47□□□□□ -0.89
VEGFA-220ENST00000519767 MT1EP04732 61 aa9.43□□□□□ -0.9
VEGFA-220ENST00000519767 A0A1B0GU33 70 aa9.42□□□□□ -0.9
VEGFA-220ENST00000519767 KRTAP19-3Q7Z4W3 81 aa9.42□□□□□ -0.9
VEGFA-220ENST00000519767 SPATA8Q6RVD6 105 aa9.41□□□□□ -0.9
VEGFA-220ENST00000519767 SPINT4Q6UDR6 99 aa9.39□□□□□ -0.91
VEGFA-220ENST00000519767 DSTQ03001 7570 aaKnown RBP9.34□□□□□ -0.91
VEGFA-220ENST00000519767 CCDC179H3BU77 68 aa9.31□□□□□ -0.92
VEGFA-220ENST00000519767 KRTAP12-1P59990 96 aa9.29□□□□□ -0.92
VEGFA-220ENST00000519767 MT1GP13640 62 aa9.22□□□□□ -0.93
VEGFA-220ENST00000519767 KRTAP19-5Q3LI72 72 aa9.22□□□□□ -0.93
VEGFA-220ENST00000519767 SMIM26A0A096LP01 95 aa9.17□□□□□ -0.94
VEGFA-220ENST00000519767 PCP4P48539 62 aa9.17□□□□□ -0.94
VEGFA-220ENST00000519767 PP632Q6XCG6 107 aa9.16□□□□□ -0.94
VEGFA-220ENST00000519767 GPR98Q8WXG9 6306 aa9.15□□□□□ -0.94
VEGFA-220ENST00000519767 KRTAP4-9Q9BYQ8 210 aa9.15□□□□□ -0.94
VEGFA-220ENST00000519767 A0A1B0GU69 56 aa9.14□□□□□ -0.95
VEGFA-220ENST00000519767 ATP5EP56381 51 aaPredicted RBP9.13□□□□□ -0.95
VEGFA-220ENST00000519767 TMEM258P61165 79 aa9.02□□□□□ -0.97
VEGFA-220ENST00000519767 A8MU10 97 aa9□□□□□ -0.97
VEGFA-220ENST00000519767 MT1MQ8N339 61 aa8.99□□□□□ -0.97
VEGFA-220ENST00000519767 MT1LQ93083 61 aa8.99□□□□□ -0.97
VEGFA-220ENST00000519767 TNP1P09430 55 aa8.96□□□□□ -0.98
VEGFA-220ENST00000519767 LCE4AQ5TA78 99 aa8.94□□□□□ -0.98
VEGFA-220ENST00000519767 LCE1DQ5T752 114 aa8.93□□□□□ -0.98
VEGFA-220ENST00000519767 LCE3AQ5TA76 89 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms