RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 C3orf79P0CE67 100 aa1.71□□□□□ -2.14
HMGB1P23-201ENST00000518743 ADIRFQ15847 76 aa1.71□□□□□ -2.14
HMGB1P23-201ENST00000518743 TOMM7Q9P0U1 55 aa1.71□□□□□ -2.14
HMGB1P23-201ENST00000518743 JMJD7-PLA2G4BH0Y9G9 81 aa1.7□□□□□ -2.14
HMGB1P23-201ENST00000518743 KRTAP19-8Q3LI54 63 aa1.7□□□□□ -2.14
HMGB1P23-201ENST00000518743 A0A1W2PPM0 123 aa1.69□□□□□ -2.14
HMGB1P23-201ENST00000518743 COX8AP10176 69 aa1.69□□□□□ -2.14
HMGB1P23-201ENST00000518743 FAM213BQ8TBF2 198 aa1.69□□□□□ -2.14
HMGB1P23-201ENST00000518743 Q96NJ1 140 aa1.69□□□□□ -2.14
HMGB1P23-201ENST00000518743 HIGD1BQ9P298 99 aa1.69□□□□□ -2.14
HMGB1P23-201ENST00000518743 SPINK8P0C7L1 97 aa1.68□□□□□ -2.14
HMGB1P23-201ENST00000518743 Q6ZUT4 128 aa1.68□□□□□ -2.14
HMGB1P23-201ENST00000518743 BAGE3Q86Y29 109 aa1.68□□□□□ -2.14
HMGB1P23-201ENST00000518743 BAGE2Q86Y30 109 aa1.68□□□□□ -2.14
HMGB1P23-201ENST00000518743 CTXND1A0A1B0GTU2 59 aa1.67□□□□□ -2.14
HMGB1P23-201ENST00000518743 ETDCA0A1B0GVM5 59 aa1.67□□□□□ -2.14
HMGB1P23-201ENST00000518743 SMIM27A0A1W2PRY6 76 aa1.67□□□□□ -2.14
HMGB1P23-201ENST00000518743 SYS1-DBNDD2H3BUS1 97 aa1.67□□□□□ -2.14
HMGB1P23-201ENST00000518743 I3L3M4 83 aa1.67□□□□□ -2.14
HMGB1P23-201ENST00000518743 SMIM13P0DJ93 91 aa1.67□□□□□ -2.14
HMGB1P23-201ENST00000518743 CRIP1P50238 77 aa1.67□□□□□ -2.14
HMGB1P23-201ENST00000518743 KRTDAPP60985 99 aa1.67□□□□□ -2.14
HMGB1P23-201ENST00000518743 LINC01545Q5VT33 79 aa1.67□□□□□ -2.14
HMGB1P23-201ENST00000518743 ATOH7Q8N100 152 aa1.67□□□□□ -2.14
HMGB1P23-201ENST00000518743 RPL39LQ96EH5 51 aaKnown RBP1.67□□□□□ -2.14
HMGB1P23-201ENST00000518743 SMIM3Q9BZL3 60 aa1.67□□□□□ -2.14
HMGB1P23-201ENST00000518743 GNG13Q9P2W3 67 aa1.67□□□□□ -2.14
HMGB1P23-201ENST00000518743 SPCS1Q9Y6A9 102 aa1.67□□□□□ -2.14
HMGB1P23-201ENST00000518743 V9GYV3 84 aa1.67□□□□□ -2.14
HMGB1P23-201ENST00000518743 F2Z2F3 143 aa1.66□□□□□ -2.14
HMGB1P23-201ENST00000518743 H3BUT2 72 aa1.66□□□□□ -2.14
HMGB1P23-201ENST00000518743 KRTAP5-8O75690 187 aa1.66□□□□□ -2.14
HMGB1P23-201ENST00000518743 MT-ATP8P03928 68 aa1.66□□□□□ -2.14
HMGB1P23-201ENST00000518743 UBE2G1P62253 170 aa1.66□□□□□ -2.14
HMGB1P23-201ENST00000518743 TMEM191AQ9H0A3 160 aa1.66□□□□□ -2.14
HMGB1P23-201ENST00000518743 LINC01546A6NGU7 62 aa1.65□□□□□ -2.15
HMGB1P23-201ENST00000518743 F8VRH5 84 aa1.65□□□□□ -2.15
HMGB1P23-201ENST00000518743 IFITM1P13164 125 aa1.65□□□□□ -2.15
HMGB1P23-201ENST00000518743 FCER1GP30273 86 aa1.65□□□□□ -2.15
HMGB1P23-201ENST00000518743 ETDBQ3ZM63 59 aa1.65□□□□□ -2.15
HMGB1P23-201ENST00000518743 C20orf78Q9BR46 151 aa1.65□□□□□ -2.15
HMGB1P23-201ENST00000518743 CCDC179H3BU77 68 aa1.64□□□□□ -2.15
HMGB1P23-201ENST00000518743 LEPROTL1O95214 131 aa1.64□□□□□ -2.15
HMGB1P23-201ENST00000518743 MEIG1Q5JSS6 88 aa1.64□□□□□ -2.15
HMGB1P23-201ENST00000518743 PPDPFLQ8WWR9 84 aa1.64□□□□□ -2.15
HMGB1P23-201ENST00000518743 TRBV7-7A0A0K0K1E9 115 aa1.63□□□□□ -2.15
HMGB1P23-201ENST00000518743 PDE6GP18545 87 aa1.63□□□□□ -2.15
HMGB1P23-201ENST00000518743 SPRR2GQ9BYE4 73 aa1.63□□□□□ -2.15
HMGB1P23-201ENST00000518743 MYMXA0A1B0GTQ4 84 aa1.62□□□□□ -2.15
HMGB1P23-201ENST00000518743 IGLC6P0CF74 106 aa1.62□□□□□ -2.15
HMGB1P23-201ENST00000518743 KRTAP20-2Q3LI61 65 aa1.62□□□□□ -2.15
HMGB1P23-201ENST00000518743 Q8IZM0 81 aa1.62□□□□□ -2.15
HMGB1P23-201ENST00000518743 TRAV23DV6A0A075B6W5 121 aa1.61□□□□□ -2.15
HMGB1P23-201ENST00000518743 NCR3O14931 201 aa1.6□□□□□ -2.15
HMGB1P23-201ENST00000518743 ACYP1P07311 99 aa1.6□□□□□ -2.15
HMGB1P23-201ENST00000518743 GCHFRP30047 84 aa1.6□□□□□ -2.15
HMGB1P23-201ENST00000518743 LINC00575Q6W349 94 aa1.6□□□□□ -2.15
HMGB1P23-201ENST00000518743 TMEM167BQ9NRX6 74 aa1.6□□□□□ -2.15
HMGB1P23-201ENST00000518743 SNCGO76070 127 aa1.59□□□□□ -2.15
HMGB1P23-201ENST00000518743 IFI27L1Q96BM0 104 aa1.59□□□□□ -2.15
HMGB1P23-201ENST00000518743 DMAC1Q96GE9 116 aa1.59□□□□□ -2.15
HMGB1P23-201ENST00000518743 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.16
HMGB1P23-201ENST00000518743 SYNE1Q8NF91 8797 aaKnown RBP1.59□□□□□ -2.16
HMGB1P23-201ENST00000518743 HIGD1CA8MV81 97 aa1.57□□□□□ -2.16
HMGB1P23-201ENST00000518743 IGKCP01834 107 aa1.57□□□□□ -2.16
HMGB1P23-201ENST00000518743 RPL39P62891 51 aaKnown RBP1.57□□□□□ -2.16
HMGB1P23-201ENST00000518743 MT1XP80297 61 aa1.57□□□□□ -2.16
HMGB1P23-201ENST00000518743 TMEM170BQ5T4T1 132 aa1.57□□□□□ -2.16
HMGB1P23-201ENST00000518743 LINC00643Q86TS7 51 aa1.57□□□□□ -2.16
HMGB1P23-201ENST00000518743 Q8N8P6 123 aa1.57□□□□□ -2.16
HMGB1P23-201ENST00000518743 A0A1B0GUT8 65 aa1.56□□□□□ -2.16
HMGB1P23-201ENST00000518743 LINC01549A6NIU2 74 aa1.56□□□□□ -2.16
HMGB1P23-201ENST00000518743 K7EMI3 77 aa1.56□□□□□ -2.16
HMGB1P23-201ENST00000518743 IFI27P40305 119 aaPredicted RBP1.56□□□□□ -2.16
HMGB1P23-201ENST00000518743 SERP2Q8N6R1 65 aa1.56□□□□□ -2.16
HMGB1P23-201ENST00000518743 PRO1854Q9UHT4 67 aa1.56□□□□□ -2.16
HMGB1P23-201ENST00000518743 ATOX1O00244 68 aa1.55□□□□□ -2.16
HMGB1P23-201ENST00000518743 KRTAP19-3Q7Z4W3 81 aa1.55□□□□□ -2.16
HMGB1P23-201ENST00000518743 WFDC13Q8IUB5 93 aa1.55□□□□□ -2.16
HMGB1P23-201ENST00000518743 CNFNQ9BYD5 112 aa1.55□□□□□ -2.16
HMGB1P23-201ENST00000518743 NXT2Q9NPJ8 142 aaKnown RBP1.55□□□□□ -2.16
HMGB1P23-201ENST00000518743 SERP1Q9Y6X1 66 aa1.55□□□□□ -2.16
HMGB1P23-201ENST00000518743 TRBV10-3A0A0K0K1G6 114 aa1.54□□□□□ -2.16
HMGB1P23-201ENST00000518743 H0YAA0 97 aa1.54□□□□□ -2.16
HMGB1P23-201ENST00000518743 PLNP26678 52 aa1.54□□□□□ -2.16
HMGB1P23-201ENST00000518743 SPRR1AP35321 89 aa1.54□□□□□ -2.16
HMGB1P23-201ENST00000518743 ATXN8Q156A1 80 aa1.54□□□□□ -2.16
HMGB1P23-201ENST00000518743 Q6ZQY7 126 aa1.54□□□□□ -2.16
HMGB1P23-201ENST00000518743 Q6ZRX8 168 aa1.54□□□□□ -2.16
HMGB1P23-201ENST00000518743 COX7B2Q8TF08 81 aa1.54□□□□□ -2.16
HMGB1P23-201ENST00000518743 KCNQ1DNQ9H478 68 aa1.54□□□□□ -2.16
HMGB1P23-201ENST00000518743 TEX49A0A1B0GTD5 131 aa1.53□□□□□ -2.16
HMGB1P23-201ENST00000518743 hADV29S1A0JD25 119 aa1.53□□□□□ -2.16
HMGB1P23-201ENST00000518743 POLR2KP53803 58 aaKnown RBP1.53□□□□□ -2.16
HMGB1P23-201ENST00000518743 CSAG1Q6PB30 78 aa1.53□□□□□ -2.16
HMGB1P23-201ENST00000518743 COPS9Q8WXC6 57 aa1.53□□□□□ -2.16
HMGB1P23-201ENST00000518743 AMELXQ99217 191 aa1.53□□□□□ -2.16
HMGB1P23-201ENST00000518743 IGIPA6NJ69 53 aa1.52□□□□□ -2.17
HMGB1P23-201ENST00000518743 D6R8Y8 96 aa1.52□□□□□ -2.17
HMGB1P23-201ENST00000518743 KLKP1Q107X0 134 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms