RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 H3BPC8 53 aa2.73□□□□□ -1.97
SCARNA18.1-201ENST00000516330 MP68P56378 58 aa2.73□□□□□ -1.97
SCARNA18.1-201ENST00000516330 MACF1Q9UPN3 7388 aaKnown RBP2.73□□□□□ -1.97
SCARNA18.1-201ENST00000516330 A0A087WVE0 104 aa2.72□□□□□ -1.97
SCARNA18.1-201ENST00000516330 Q5VV11 94 aa2.72□□□□□ -1.97
SCARNA18.1-201ENST00000516330 KRTAP3-3Q9BYR6 98 aa2.72□□□□□ -1.97
SCARNA18.1-201ENST00000516330 IMUPQ9GZP8 106 aa2.72□□□□□ -1.97
SCARNA18.1-201ENST00000516330 NDUFC1O43677 76 aa2.71□□□□□ -1.98
SCARNA18.1-201ENST00000516330 KRTAP19-8Q3LI54 63 aa2.71□□□□□ -1.98
SCARNA18.1-201ENST00000516330 OCR1Q9BZK8 76 aa2.71□□□□□ -1.98
SCARNA18.1-201ENST00000516330 A0A1B0GV90 55 aa2.7□□□□□ -1.98
SCARNA18.1-201ENST00000516330 LINC00208Q96KT6 92 aa2.69□□□□□ -1.98
SCARNA18.1-201ENST00000516330 MT1BP07438 61 aa2.68□□□□□ -1.98
SCARNA18.1-201ENST00000516330 A6NN06 94 aa2.67□□□□□ -1.98
SCARNA18.1-201ENST00000516330 C20orf197Q8N268 126 aa2.67□□□□□ -1.98
SCARNA18.1-201ENST00000516330 DMAC1Q96GE9 116 aa2.66□□□□□ -1.98
SCARNA18.1-201ENST00000516330 SYNE2Q8WXH0 6885 aaKnown RBP2.65□□□□□ -1.99
SCARNA18.1-201ENST00000516330 SCGB1A1P11684 91 aa2.65□□□□□ -1.99
SCARNA18.1-201ENST00000516330 KRTAP10-5P60370 271 aa2.65□□□□□ -1.99
SCARNA18.1-201ENST00000516330 KRTAP6-3Q3LI67 103 aa2.65□□□□□ -1.99
SCARNA18.1-201ENST00000516330 SMIM20Q8N5G0 67 aa2.65□□□□□ -1.99
SCARNA18.1-201ENST00000516330 K7ERU9 68 aa2.64□□□□□ -1.99
SCARNA18.1-201ENST00000516330 TRAV7A0A075B6U4 112 aa2.63□□□□□ -1.99
SCARNA18.1-201ENST00000516330 ADM2Q7Z4H4 148 aa2.61□□□□□ -1.99
SCARNA18.1-201ENST00000516330 PRO2289Q9P1D8 64 aa2.61□□□□□ -1.99
SCARNA18.1-201ENST00000516330 R4GN34 69 aa2.6□□□□□ -1.99
SCARNA18.1-201ENST00000516330 SPTSSBQ8NFR3 76 aa2.59□□□□□ -1.99
SCARNA18.1-201ENST00000516330 ACYP2P14621 99 aa2.58□□□□□ -2
SCARNA18.1-201ENST00000516330 MT-ATP8P03928 68 aa2.56□□□□□ -2
SCARNA18.1-201ENST00000516330 KRTAP5-9P26371 169 aa2.56□□□□□ -2
SCARNA18.1-201ENST00000516330 SPANXA2-OT1Q8N9U9 137 aa2.56□□□□□ -2
SCARNA18.1-201ENST00000516330 M0QZ58 72 aa2.55□□□□□ -2
SCARNA18.1-201ENST00000516330 PLAC4Q8WY50 150 aa2.55□□□□□ -2
SCARNA18.1-201ENST00000516330 P0C880 135 aa2.54□□□□□ -2
SCARNA18.1-201ENST00000516330 MUC12Q9UKN1 5478 aa2.53□□□□□ -2
SCARNA18.1-201ENST00000516330 CHKB-CPT1BH3BT56 60 aa2.53□□□□□ -2
SCARNA18.1-201ENST00000516330 KRTAP12-2P59991 146 aa2.53□□□□□ -2
SCARNA18.1-201ENST00000516330 MT1XP80297 61 aa2.52□□□□□ -2.01
SCARNA18.1-201ENST00000516330 KRTAP3-2Q9BYR7 98 aa2.52□□□□□ -2.01
SCARNA18.1-201ENST00000516330 SERP2Q8N6R1 65 aa2.51□□□□□ -2.01
SCARNA18.1-201ENST00000516330 KMT2DO14686 5537 aa2.49□□□□□ -2.01
SCARNA18.1-201ENST00000516330 SNURFQ9Y675 71 aa2.49□□□□□ -2.01
SCARNA18.1-201ENST00000516330 NEBP20929 6669 aa2.48□□□□□ -2.01
SCARNA18.1-201ENST00000516330 MDN1Q9NU22 5596 aa2.48□□□□□ -2.01
SCARNA18.1-201ENST00000516330 LINC01554Q52M75 96 aa2.47□□□□□ -2.01
SCARNA18.1-201ENST00000516330 KRTAP8-1Q8IUC2 63 aa2.45□□□□□ -2.02
SCARNA18.1-201ENST00000516330 COX7CP15954 63 aa2.44□□□□□ -2.02
SCARNA18.1-201ENST00000516330 KRTAP20-1Q3LI63 56 aa2.44□□□□□ -2.02
SCARNA18.1-201ENST00000516330 SPRR2FQ96RM1 72 aa2.44□□□□□ -2.02
SCARNA18.1-201ENST00000516330 COA5Q86WW8 74 aa2.43□□□□□ -2.02
SCARNA18.1-201ENST00000516330 SEC61GP60059 68 aa2.42□□□□□ -2.02
SCARNA18.1-201ENST00000516330 KRTAP10-12P60413 245 aa2.42□□□□□ -2.02
SCARNA18.1-201ENST00000516330 H7BZZ5 65 aa2.4□□□□□ -2.03
SCARNA18.1-201ENST00000516330 SPRR2EP22531 72 aa2.4□□□□□ -2.03
SCARNA18.1-201ENST00000516330 SPRR2BP35325 72 aa2.4□□□□□ -2.03
SCARNA18.1-201ENST00000516330 SPRR2AP35326 72 aa2.4□□□□□ -2.03
SCARNA18.1-201ENST00000516330 SERP1Q9Y6X1 66 aa2.4□□□□□ -2.03
SCARNA18.1-201ENST00000516330 KRTAP2-3P0C7H8 128 aa2.38□□□□□ -2.03
SCARNA18.1-201ENST00000516330 KRTAP10-7P60409 375 aaPredicted RBP2.38□□□□□ -2.03
SCARNA18.1-201ENST00000516330 KRTAP2-4Q9BYR9 128 aa2.38□□□□□ -2.03
SCARNA18.1-201ENST00000516330 KRTAP13-4Q3LI77 160 aa2.37□□□□□ -2.03
SCARNA18.1-201ENST00000516330 LCE1AQ5T7P2 110 aa2.37□□□□□ -2.03
SCARNA18.1-201ENST00000516330 CAMK2N1Q7Z7J9 78 aa2.37□□□□□ -2.03
SCARNA18.1-201ENST00000516330 ATP5EP56381 51 aaPredicted RBP2.36□□□□□ -2.03
SCARNA18.1-201ENST00000516330 KRTAP4-8A0A0G2JLE6 195 aa2.35□□□□□ -2.03
SCARNA18.1-201ENST00000516330 KRTAP4-8Q9BYQ9 185 aa2.35□□□□□ -2.03
SCARNA18.1-201ENST00000516330 A0A1B0GU33 70 aa2.34□□□□□ -2.03
SCARNA18.1-201ENST00000516330 ANAPC13Q9BS18 74 aa2.34□□□□□ -2.03
SCARNA18.1-201ENST00000516330 A0A1B0GU69 56 aa2.32□□□□□ -2.04
SCARNA18.1-201ENST00000516330 SPRR2DP22532 72 aa2.32□□□□□ -2.04
SCARNA18.1-201ENST00000516330 CYSTM1Q9H1C7 97 aa2.32□□□□□ -2.04
SCARNA18.1-201ENST00000516330 SMIM26A0A096LP01 95 aa2.31□□□□□ -2.04
SCARNA18.1-201ENST00000516330 KRTAP2-2Q9BYT5 123 aa2.31□□□□□ -2.04
SCARNA18.1-201ENST00000516330 KRTAP2-1Q9BYU5 128 aa2.31□□□□□ -2.04
SCARNA18.1-201ENST00000516330 KRTAP12-1P59990 96 aa2.29□□□□□ -2.04
SCARNA18.1-201ENST00000516330 SPATA8Q6RVD6 105 aa2.29□□□□□ -2.04
SCARNA18.1-201ENST00000516330 PRR15LQ9BU68 103 aa2.29□□□□□ -2.04
SCARNA18.1-201ENST00000516330 A0A0D9SG42 100 aa2.28□□□□□ -2.04
SCARNA18.1-201ENST00000516330 SPINT4Q6UDR6 99 aa2.28□□□□□ -2.04
SCARNA18.1-201ENST00000516330 TMEM258P61165 79 aa2.26□□□□□ -2.05
SCARNA18.1-201ENST00000516330 KRTAP19-7Q3SYF9 63 aa2.26□□□□□ -2.05
SCARNA18.1-201ENST00000516330 LCE3BQ5TA77 95 aa2.26□□□□□ -2.05
SCARNA18.1-201ENST00000516330 CCDC179H3BU77 68 aa2.24□□□□□ -2.05
SCARNA18.1-201ENST00000516330 MT1EP04732 61 aa2.24□□□□□ -2.05
SCARNA18.1-201ENST00000516330 LCE5AQ5TCM9 118 aa2.24□□□□□ -2.05
SCARNA18.1-201ENST00000516330 KRTAP19-3Q7Z4W3 81 aa2.24□□□□□ -2.05
SCARNA18.1-201ENST00000516330 LINC01558Q9Y6Z2 57 aa2.23□□□□□ -2.05
SCARNA18.1-201ENST00000516330 TNP1P09430 55 aa2.21□□□□□ -2.06
SCARNA18.1-201ENST00000516330 PP632Q6XCG6 107 aa2.21□□□□□ -2.06
SCARNA18.1-201ENST00000516330 A8MU10 97 aa2.2□□□□□ -2.06
SCARNA18.1-201ENST00000516330 UQCR11O14957 56 aa2.2□□□□□ -2.06
SCARNA18.1-201ENST00000516330 DSTQ03001 7570 aaKnown RBP2.2□□□□□ -2.06
SCARNA18.1-201ENST00000516330 MT1GP13640 62 aa2.19□□□□□ -2.06
SCARNA18.1-201ENST00000516330 C10orf95Q9H7T3 257 aa2.18□□□□□ -2.06
SCARNA18.1-201ENST00000516330 KRTAP19-5Q3LI72 72 aa2.17□□□□□ -2.06
SCARNA18.1-201ENST00000516330 V9GYY9 64 aa2.16□□□□□ -2.06
SCARNA18.1-201ENST00000516330 LCE3AQ5TA76 89 aa2.15□□□□□ -2.07
SCARNA18.1-201ENST00000516330 MT1LQ93083 61 aa2.14□□□□□ -2.07
SCARNA18.1-201ENST00000516330 K7ERS5 55 aa2.13□□□□□ -2.07
SCARNA18.1-201ENST00000516330 MT1MQ8N339 61 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms