RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 KLKP1Q107X0 134 aa10.34□□□□□ -0.75
CLDND1-230ENST00000514537 KRTAP19-8Q3LI54 63 aa10.34□□□□□ -0.75
CLDND1-230ENST00000514537 LINC00643Q86TS7 51 aa10.34□□□□□ -0.75
CLDND1-230ENST00000514537 Q5VV11 94 aa10.31□□□□□ -0.76
CLDND1-230ENST00000514537 A0A1B0GV90 55 aa10.23□□□□□ -0.77
CLDND1-230ENST00000514537 KRTAP6-3Q3LI67 103 aa10.22□□□□□ -0.77
CLDND1-230ENST00000514537 A6NN06 94 aa10.21□□□□□ -0.77
CLDND1-230ENST00000514537 CRIPTQ9P021 101 aa10.21□□□□□ -0.77
CLDND1-230ENST00000514537 IMUPQ9GZP8 106 aa10.2□□□□□ -0.78
CLDND1-230ENST00000514537 NDUFC1O43677 76 aa10.19□□□□□ -0.78
CLDND1-230ENST00000514537 LINC00208Q96KT6 92 aa10.18□□□□□ -0.78
CLDND1-230ENST00000514537 A8MUN3 132 aa10.17□□□□□ -0.78
CLDND1-230ENST00000514537 OCR1Q9BZK8 76 aa10.17□□□□□ -0.78
CLDND1-230ENST00000514537 H0YAA0 97 aa10.13□□□□□ -0.79
CLDND1-230ENST00000514537 MP68P56378 58 aa10.12□□□□□ -0.79
CLDND1-230ENST00000514537 KRTAP10-5P60370 271 aa10.11□□□□□ -0.79
CLDND1-230ENST00000514537 J3QR89 54 aa10.03□□□□□ -0.8
CLDND1-230ENST00000514537 ADM2Q7Z4H4 148 aa10□□□□□ -0.81
CLDND1-230ENST00000514537 H3BPC8 53 aa9.99□□□□□ -0.81
CLDND1-230ENST00000514537 NEBP20929 6669 aa9.98□□□□□ -0.81
CLDND1-230ENST00000514537 SCGB1A1P11684 91 aa9.92□□□□□ -0.82
CLDND1-230ENST00000514537 MUC12Q9UKN1 5478 aa9.87□□□□□ -0.83
CLDND1-230ENST00000514537 DMAC1Q96GE9 116 aa9.87□□□□□ -0.83
CLDND1-230ENST00000514537 P0C880 135 aa9.78□□□□□ -0.84
CLDND1-230ENST00000514537 KRTAP3-2Q9BYR7 98 aa9.77□□□□□ -0.85
CLDND1-230ENST00000514537 KRTAP5-9P26371 169 aa9.75□□□□□ -0.85
CLDND1-230ENST00000514537 C20orf197Q8N268 126 aa9.75□□□□□ -0.85
CLDND1-230ENST00000514537 R4GN34 69 aa9.75□□□□□ -0.85
CLDND1-230ENST00000514537 PLAC4Q8WY50 150 aa9.71□□□□□ -0.86
CLDND1-230ENST00000514537 MT-ATP8P03928 68 aa9.7□□□□□ -0.86
CLDND1-230ENST00000514537 MT1XP80297 61 aa9.7□□□□□ -0.86
CLDND1-230ENST00000514537 PRO2289Q9P1D8 64 aa9.69□□□□□ -0.86
CLDND1-230ENST00000514537 KMT2DO14686 5537 aa9.69□□□□□ -0.86
CLDND1-230ENST00000514537 TRAV7A0A075B6U4 112 aa9.67□□□□□ -0.86
CLDND1-230ENST00000514537 M0QZ58 72 aa9.66□□□□□ -0.86
CLDND1-230ENST00000514537 SMIM20Q8N5G0 67 aa9.64□□□□□ -0.87
CLDND1-230ENST00000514537 ACYP2P14621 99 aa9.63□□□□□ -0.87
CLDND1-230ENST00000514537 K7ERU9 68 aa9.62□□□□□ -0.87
CLDND1-230ENST00000514537 MDN1Q9NU22 5596 aa9.61□□□□□ -0.87
CLDND1-230ENST00000514537 LINC01554Q52M75 96 aa9.52□□□□□ -0.89
CLDND1-230ENST00000514537 SPTSSBQ8NFR3 76 aa9.5□□□□□ -0.89
CLDND1-230ENST00000514537 KRTAP12-2P59991 146 aa9.47□□□□□ -0.89
CLDND1-230ENST00000514537 KRTAP20-1Q3LI63 56 aa9.44□□□□□ -0.9
CLDND1-230ENST00000514537 SNURFQ9Y675 71 aa9.44□□□□□ -0.9
CLDND1-230ENST00000514537 CHKB-CPT1BH3BT56 60 aa9.42□□□□□ -0.9
CLDND1-230ENST00000514537 SPRR2FQ96RM1 72 aa9.42□□□□□ -0.9
CLDND1-230ENST00000514537 KRTAP8-1Q8IUC2 63 aa9.38□□□□□ -0.91
CLDND1-230ENST00000514537 SPANXA2-OT1Q8N9U9 137 aa9.35□□□□□ -0.91
CLDND1-230ENST00000514537 SERP2Q8N6R1 65 aa9.3□□□□□ -0.92
CLDND1-230ENST00000514537 KRTAP4-8A0A0G2JLE6 195 aa9.28□□□□□ -0.92
CLDND1-230ENST00000514537 SPRR2EP22531 72 aa9.28□□□□□ -0.92
CLDND1-230ENST00000514537 SPRR2BP35325 72 aa9.28□□□□□ -0.92
CLDND1-230ENST00000514537 SPRR2AP35326 72 aa9.28□□□□□ -0.92
CLDND1-230ENST00000514537 KRTAP4-8Q9BYQ9 185 aa9.28□□□□□ -0.92
CLDND1-230ENST00000514537 KRTAP10-7P60409 375 aaPredicted RBP9.25□□□□□ -0.93
CLDND1-230ENST00000514537 KRTAP2-3P0C7H8 128 aa9.21□□□□□ -0.94
CLDND1-230ENST00000514537 KRTAP10-12P60413 245 aa9.21□□□□□ -0.94
CLDND1-230ENST00000514537 KRTAP2-4Q9BYR9 128 aa9.21□□□□□ -0.94
CLDND1-230ENST00000514537 LCE1AQ5T7P2 110 aa9.19□□□□□ -0.94
CLDND1-230ENST00000514537 KRTAP13-4Q3LI77 160 aa9.13□□□□□ -0.95
CLDND1-230ENST00000514537 COA5Q86WW8 74 aa9.07□□□□□ -0.96
CLDND1-230ENST00000514537 COX7CP15954 63 aa9□□□□□ -0.97
CLDND1-230ENST00000514537 SPRR2DP22532 72 aa8.98□□□□□ -0.97
CLDND1-230ENST00000514537 CAMK2N1Q7Z7J9 78 aa8.95□□□□□ -0.98
CLDND1-230ENST00000514537 KRTAP2-2Q9BYT5 123 aa8.93□□□□□ -0.98
CLDND1-230ENST00000514537 KRTAP2-1Q9BYU5 128 aa8.93□□□□□ -0.98
CLDND1-230ENST00000514537 SEC61GP60059 68 aa8.92□□□□□ -0.98
CLDND1-230ENST00000514537 SERP1Q9Y6X1 66 aa8.92□□□□□ -0.98
CLDND1-230ENST00000514537 H7BZZ5 65 aa8.88□□□□□ -0.99
CLDND1-230ENST00000514537 CYSTM1Q9H1C7 97 aa8.88□□□□□ -0.99
CLDND1-230ENST00000514537 A0A0D9SG42 100 aa8.82□□□□□ -1
CLDND1-230ENST00000514537 SPATA8Q6RVD6 105 aa8.81□□□□□ -1
CLDND1-230ENST00000514537 A0A1B0GU33 70 aa8.79□□□□□ -1
CLDND1-230ENST00000514537 LCE3BQ5TA77 95 aa8.74□□□□□ -1.01
CLDND1-230ENST00000514537 SPINT4Q6UDR6 99 aa8.71□□□□□ -1.02
CLDND1-230ENST00000514537 KRTAP12-1P59990 96 aa8.67□□□□□ -1.02
CLDND1-230ENST00000514537 KRTAP19-7Q3SYF9 63 aa8.67□□□□□ -1.02
CLDND1-230ENST00000514537 ANAPC13Q9BS18 74 aa8.63□□□□□ -1.03
CLDND1-230ENST00000514537 A0A1B0GU69 56 aa8.61□□□□□ -1.03
CLDND1-230ENST00000514537 MT1EP04732 61 aa8.59□□□□□ -1.03
CLDND1-230ENST00000514537 LCE5AQ5TCM9 118 aa8.56□□□□□ -1.04
CLDND1-230ENST00000514537 SMIM26A0A096LP01 95 aa8.54□□□□□ -1.04
CLDND1-230ENST00000514537 KRTAP19-3Q7Z4W3 81 aa8.52□□□□□ -1.05
CLDND1-230ENST00000514537 DSTQ03001 7570 aaKnown RBP8.51□□□□□ -1.05
CLDND1-230ENST00000514537 CCDC179H3BU77 68 aa8.48□□□□□ -1.05
CLDND1-230ENST00000514537 A8MU10 97 aa8.47□□□□□ -1.05
CLDND1-230ENST00000514537 KRTAP19-5Q3LI72 72 aa8.44□□□□□ -1.06
CLDND1-230ENST00000514537 ATP5EP56381 51 aaPredicted RBP8.38□□□□□ -1.07
CLDND1-230ENST00000514537 MT1GP13640 62 aa8.33□□□□□ -1.08
CLDND1-230ENST00000514537 PRR15LQ9BU68 103 aa8.33□□□□□ -1.08
CLDND1-230ENST00000514537 C10orf95Q9H7T3 257 aa8.31□□□□□ -1.08
CLDND1-230ENST00000514537 LINC01558Q9Y6Z2 57 aa8.28□□□□□ -1.08
CLDND1-230ENST00000514537 TNP1P09430 55 aa8.26□□□□□ -1.09
CLDND1-230ENST00000514537 PP632Q6XCG6 107 aa8.23□□□□□ -1.09
CLDND1-230ENST00000514537 LCE3AQ5TA76 89 aa8.22□□□□□ -1.09
CLDND1-230ENST00000514537 MT1LQ93083 61 aa8.2□□□□□ -1.1
CLDND1-230ENST00000514537 MT1MQ8N339 61 aa8.17□□□□□ -1.1
CLDND1-230ENST00000514537 TMEM258P61165 79 aa8.14□□□□□ -1.11
CLDND1-230ENST00000514537 KRTAP4-9Q9BYQ8 210 aa8.14□□□□□ -1.11
CLDND1-230ENST00000514537 GPR98Q8WXG9 6306 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms