RNA–Protein interactions for RNA: ENST00000514183.5

RACK1-231, Transcript of receptor for activated C kinase 1, human

TSL 2

Gene RACK1, Length 1,439 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-231	ENST00000514183	NDUFC1	O43677	76 aa		3.67	□□□□□ -1.82
RACK1-231	ENST00000514183	TMEM258	P61165	79 aa		3.67	□□□□□ -1.82
RACK1-231	ENST00000514183	ZCCHC13	Q8WW36	166 aa	Known RBP	3.67	□□□□□ -1.82
RACK1-231	ENST00000514183	LINC00208	Q96KT6	92 aa		3.67	□□□□□ -1.82
RACK1-231	ENST00000514183		H3BPC8	53 aa		3.66	□□□□□ -1.82
RACK1-231	ENST00000514183	C1orf64	Q8NEQ6	169 aa		3.66	□□□□□ -1.82
RACK1-231	ENST00000514183	KRTAP5-3	Q6L8H2	238 aa		3.65	□□□□□ -1.83
RACK1-231	ENST00000514183		Q8N9P0	234 aa	Predicted RBP	3.65	□□□□□ -1.83
RACK1-231	ENST00000514183	FAM236D	A0A1B0GTK5	79 aa		3.64	□□□□□ -1.83
RACK1-231	ENST00000514183	FAM236C	P0DP71	79 aa		3.64	□□□□□ -1.83
RACK1-231	ENST00000514183	KRTAP13-3	Q3SY46	172 aa		3.64	□□□□□ -1.83
RACK1-231	ENST00000514183	C9orf92	A6NGG3	77 aa		3.63	□□□□□ -1.83
RACK1-231	ENST00000514183		Q5W150	140 aa		3.63	□□□□□ -1.83
RACK1-231	ENST00000514183	PRAC1	Q96KF2	57 aa		3.62	□□□□□ -1.83
RACK1-231	ENST00000514183	LOC101927531	A0A1B0GV80	90 aa		3.61	□□□□□ -1.83
RACK1-231	ENST00000514183	ATP5E	P56381	51 aa	Predicted RBP	3.61	□□□□□ -1.83
RACK1-231	ENST00000514183	PCOTH	Q58A44	107 aa		3.59	□□□□□ -1.84
RACK1-231	ENST00000514183	C20orf166-AS1	Q96NR2	134 aa		3.59	□□□□□ -1.84
RACK1-231	ENST00000514183	IGKV2D-30	A0A075B6S6	120 aa		3.58	□□□□□ -1.84
RACK1-231	ENST00000514183		A8MUU9	505 aa		3.58	□□□□□ -1.84
RACK1-231	ENST00000514183		M0R2T5	61 aa		3.57	□□□□□ -1.84
RACK1-231	ENST00000514183	CYP4F30P	Q9H0H9	118 aa		3.57	□□□□□ -1.84
RACK1-231	ENST00000514183	SPANXA2-OT1	Q8N9U9	137 aa		3.56	□□□□□ -1.84
RACK1-231	ENST00000514183	SERP1	Q9Y6X1	66 aa		3.56	□□□□□ -1.84
RACK1-231	ENST00000514183	MT1H	P80294	61 aa		3.54	□□□□□ -1.84
RACK1-231	ENST00000514183	KRTAP4-1	Q9BYQ7	146 aa		3.54	□□□□□ -1.84
RACK1-231	ENST00000514183	KRTAP10-6	P60371	365 aa	Predicted RBP	3.53	□□□□□ -1.84
RACK1-231	ENST00000514183	HRES1	P13985	223 aa		3.53	□□□□□ -1.85
RACK1-231	ENST00000514183	COX6B2	Q6YFQ2	88 aa		3.53	□□□□□ -1.85
RACK1-231	ENST00000514183	SMIM26	A0A096LP01	95 aa		3.52	□□□□□ -1.85
RACK1-231	ENST00000514183	RPL37	P61927	97 aa	Known RBP	3.52	□□□□□ -1.85
RACK1-231	ENST00000514183	C7orf65	Q6ZTY9	151 aa		3.52	□□□□□ -1.85
RACK1-231	ENST00000514183	C4orf26	Q17RF5	130 aa		3.51	□□□□□ -1.85
RACK1-231	ENST00000514183	ATP11AUN	Q6ZP68	121 aa		3.51	□□□□□ -1.85
RACK1-231	ENST00000514183	KRTAP9-8	Q9BYQ0	159 aa		3.5	□□□□□ -1.85
RACK1-231	ENST00000514183	KRTAP19-2	Q3LHN2	52 aa		3.49	□□□□□ -1.85
RACK1-231	ENST00000514183	SPINK7	P58062	85 aa		3.48	□□□□□ -1.85
RACK1-231	ENST00000514183	COA5	Q86WW8	74 aa		3.48	□□□□□ -1.85
RACK1-231	ENST00000514183	DMAC1	Q96GE9	116 aa		3.47	□□□□□ -1.85
RACK1-231	ENST00000514183	ACYP2	P14621	99 aa		3.45	□□□□□ -1.86
RACK1-231	ENST00000514183	PRO0628	Q9UI54	55 aa		3.43	□□□□□ -1.86
RACK1-231	ENST00000514183		A8MUN3	132 aa		3.42	□□□□□ -1.86
RACK1-231	ENST00000514183	CHKB-CPT1B	H3BT56	60 aa		3.42	□□□□□ -1.86
RACK1-231	ENST00000514183		Q1T7F1	81 aa		3.4	□□□□□ -1.87
RACK1-231	ENST00000514183	FLG	P20930	4061 aa	Predicted RBP	3.4	□□□□□ -1.87
RACK1-231	ENST00000514183		V9GYY9	64 aa		3.37	□□□□□ -1.87
RACK1-231	ENST00000514183	PSPHP1	O15172	72 aa		3.35	□□□□□ -1.87
RACK1-231	ENST00000514183	LINC01558	Q9Y6Z2	57 aa		3.35	□□□□□ -1.87
RACK1-231	ENST00000514183	SPTSSB	Q8NFR3	76 aa		3.34	□□□□□ -1.88
RACK1-231	ENST00000514183	PRR15L	Q9BU68	103 aa		3.34	□□□□□ -1.88
RACK1-231	ENST00000514183	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.32	□□□□□ -1.88
RACK1-231	ENST00000514183	SSPO	A2VEC9	5147 aa		3.32	□□□□□ -1.88
RACK1-231	ENST00000514183	USH2A	O75445	5202 aa		3.32	□□□□□ -1.88
RACK1-231	ENST00000514183	RBM12B-AS1	Q9P1G2	102 aa		3.32	□□□□□ -1.88
RACK1-231	ENST00000514183	SYNE2	Q8WXH0	6885 aa	Known RBP	3.31	□□□□□ -1.88
RACK1-231	ENST00000514183	H1FX-AS1	Q4G0G2	97 aa		3.3	□□□□□ -1.88
RACK1-231	ENST00000514183		Q5VV11	94 aa		3.3	□□□□□ -1.88
RACK1-231	ENST00000514183	BRK1	Q8WUW1	75 aa		3.3	□□□□□ -1.88
RACK1-231	ENST00000514183		S4R3F8	94 aa		3.3	□□□□□ -1.88
RACK1-231	ENST00000514183	MACF1	Q9UPN3	7388 aa	Known RBP	3.29	□□□□□ -1.88
RACK1-231	ENST00000514183	LCE1A	Q5T7P2	110 aa		3.29	□□□□□ -1.88
RACK1-231	ENST00000514183		A0A1B0GU69	56 aa		3.28	□□□□□ -1.88
RACK1-231	ENST00000514183	LCA10	Q71F78	164 aa		3.28	□□□□□ -1.88
RACK1-231	ENST00000514183	NDUFAF8	A1L188	74 aa		3.27	□□□□□ -1.89
RACK1-231	ENST00000514183	KRTAP10-10	P60014	251 aa		3.26	□□□□□ -1.89
RACK1-231	ENST00000514183	SEC61G	P60059	68 aa		3.26	□□□□□ -1.89
RACK1-231	ENST00000514183	KRTAP6-3	Q3LI67	103 aa		3.25	□□□□□ -1.89
RACK1-231	ENST00000514183		A6NED7	52 aa		3.24	□□□□□ -1.89
RACK1-231	ENST00000514183	MT2A	P02795	61 aa		3.24	□□□□□ -1.89
RACK1-231	ENST00000514183	KRTAP19-6	Q3LI70	58 aa		3.22	□□□□□ -1.89
RACK1-231	ENST00000514183	PMAIP1	Q13794	54 aa		3.21	□□□□□ -1.9
RACK1-231	ENST00000514183	CSAG1	Q6PB30	78 aa		3.21	□□□□□ -1.9
RACK1-231	ENST00000514183	MT1F	P04733	61 aa		3.19	□□□□□ -1.9
RACK1-231	ENST00000514183		A0A1B0GU33	70 aa		3.18	□□□□□ -1.9
RACK1-231	ENST00000514183		A8MU10	97 aa		3.18	□□□□□ -1.9
RACK1-231	ENST00000514183	UQCR11	O14957	56 aa		3.18	□□□□□ -1.9
RACK1-231	ENST00000514183	CDC42SE1	Q9NRR8	79 aa		3.18	□□□□□ -1.9
RACK1-231	ENST00000514183	ADM2	Q7Z4H4	148 aa		3.17	□□□□□ -1.9
RACK1-231	ENST00000514183	MIR22HG	Q0VDD5	57 aa		3.16	□□□□□ -1.9
RACK1-231	ENST00000514183	SPATA8	Q6RVD6	105 aa		3.15	□□□□□ -1.91
RACK1-231	ENST00000514183		H0YAA0	97 aa		3.14	□□□□□ -1.91
RACK1-231	ENST00000514183		P0C880	135 aa		3.14	□□□□□ -1.91
RACK1-231	ENST00000514183	NEB	P20929	6669 aa		3.12	□□□□□ -1.91
RACK1-231	ENST00000514183		A6NN06	94 aa		3.12	□□□□□ -1.91
RACK1-231	ENST00000514183	KRTAP20-1	Q3LI63	56 aa		3.11	□□□□□ -1.91
RACK1-231	ENST00000514183	KTN1-AS1	Q86SY8	53 aa		3.1	□□□□□ -1.91
RACK1-231	ENST00000514183	KRTAP13-4	Q3LI77	160 aa		3.1	□□□□□ -1.91
RACK1-231	ENST00000514183		A0A0D9SG42	100 aa		3.06	□□□□□ -1.92
RACK1-231	ENST00000514183		M0QZ58	72 aa		3.05	□□□□□ -1.92
RACK1-231	ENST00000514183	MT3	P25713	68 aa		3.05	□□□□□ -1.92
RACK1-231	ENST00000514183	MUC12	Q9UKN1	5478 aa		3.04	□□□□□ -1.92
RACK1-231	ENST00000514183		R4GN34	69 aa		3.03	□□□□□ -1.92
RACK1-231	ENST00000514183	KRTAP2-2	Q9BYT5	123 aa		3.02	□□□□□ -1.93
RACK1-231	ENST00000514183		K7ERS5	55 aa		3.01	□□□□□ -1.93
RACK1-231	ENST00000514183	KRTAP2-3	P0C7H8	128 aa		3	□□□□□ -1.93
RACK1-231	ENST00000514183	LINC01554	Q52M75	96 aa		3	□□□□□ -1.93
RACK1-231	ENST00000514183	KRTAP2-4	Q9BYR9	128 aa		3	□□□□□ -1.93
RACK1-231	ENST00000514183	KRTAP5-9	P26371	169 aa		2.98	□□□□□ -1.93
RACK1-231	ENST00000514183	KRTAP12-2	P59991	146 aa		2.98	□□□□□ -1.93
RACK1-231	ENST00000514183	SPINT4	Q6UDR6	99 aa		2.98	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms