RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 C4orf26Q17RF5 130 aa5.13□□□□□ -1.59
NEDD9-214ENST00000513989 ANAPC13Q9BS18 74 aa5.13□□□□□ -1.59
NEDD9-214ENST00000513989 COX7CP15954 63 aa5.11□□□□□ -1.59
NEDD9-214ENST00000513989 H1FX-AS1Q4G0G2 97 aa5.09□□□□□ -1.59
NEDD9-214ENST00000513989 C20orf197Q8N268 126 aa5.09□□□□□ -1.59
NEDD9-214ENST00000513989 KRTAP9-9Q9BYP9 154 aa5.09□□□□□ -1.59
NEDD9-214ENST00000513989 KRTAP9-4Q9BYQ2 154 aa5.09□□□□□ -1.59
NEDD9-214ENST00000513989 KRTAP10-6P60371 365 aaPredicted RBP5.08□□□□□ -1.6
NEDD9-214ENST00000513989 RPS28P62857 69 aaKnown RBP5.08□□□□□ -1.6
NEDD9-214ENST00000513989 KLKP1Q107X0 134 aa5.08□□□□□ -1.6
NEDD9-214ENST00000513989 SNURFQ9Y675 71 aa5.08□□□□□ -1.6
NEDD9-214ENST00000513989 A8MUN3 132 aa5.06□□□□□ -1.6
NEDD9-214ENST00000513989 M0R2T5 61 aa5.05□□□□□ -1.6
NEDD9-214ENST00000513989 NDUFC1O43677 76 aa5.05□□□□□ -1.6
NEDD9-214ENST00000513989 H3BS24 57 aa5.04□□□□□ -1.6
NEDD9-214ENST00000513989 KRTAP3-1Q9BYR8 98 aa5.01□□□□□ -1.61
NEDD9-214ENST00000513989 KRTAP4-8A0A0G2JLE6 195 aa5□□□□□ -1.61
NEDD9-214ENST00000513989 ACYP2P14621 99 aa4.99□□□□□ -1.61
NEDD9-214ENST00000513989 SPANXA2-OT1Q8N9U9 137 aa4.99□□□□□ -1.61
NEDD9-214ENST00000513989 S4R3F8 94 aa4.99□□□□□ -1.61
NEDD9-214ENST00000513989 DMAC1Q96GE9 116 aa4.97□□□□□ -1.61
NEDD9-214ENST00000513989 CCDC179H3BU77 68 aa4.95□□□□□ -1.62
NEDD9-214ENST00000513989 KRTAP19-4Q3LI73 84 aa4.95□□□□□ -1.62
NEDD9-214ENST00000513989 CSAG1Q6PB30 78 aa4.95□□□□□ -1.62
NEDD9-214ENST00000513989 SSPOA2VEC9 5147 aa4.94□□□□□ -1.62
NEDD9-214ENST00000513989 H7BZZ5 65 aa4.93□□□□□ -1.62
NEDD9-214ENST00000513989 LCA10Q71F78 164 aa4.93□□□□□ -1.62
NEDD9-214ENST00000513989 SEC61GP60059 68 aa4.92□□□□□ -1.62
NEDD9-214ENST00000513989 PRO0628Q9UI54 55 aa4.92□□□□□ -1.62
NEDD9-214ENST00000513989 USH2AO75445 5202 aa4.91□□□□□ -1.62
NEDD9-214ENST00000513989 CHKB-CPT1BH3BT56 60 aa4.91□□□□□ -1.62
NEDD9-214ENST00000513989 SPTSSBQ8NFR3 76 aa4.9□□□□□ -1.63
NEDD9-214ENST00000513989 V9GYY9 64 aa4.9□□□□□ -1.63
NEDD9-214ENST00000513989 LCE1DQ5T752 114 aa4.89□□□□□ -1.63
NEDD9-214ENST00000513989 KRTAP9-8Q9BYQ0 159 aa4.88□□□□□ -1.63
NEDD9-214ENST00000513989 TMEM258P61165 79 aa4.87□□□□□ -1.63
NEDD9-214ENST00000513989 CYSTM1Q9H1C7 97 aa4.87□□□□□ -1.63
NEDD9-214ENST00000513989 ATP5EP56381 51 aaPredicted RBP4.86□□□□□ -1.63
NEDD9-214ENST00000513989 KRTAP4-7Q9BYR0 210 aa4.82□□□□□ -1.64
NEDD9-214ENST00000513989 KRTAP9-7A8MTY7 169 aa4.81□□□□□ -1.64
NEDD9-214ENST00000513989 LCE4AQ5TA78 99 aa4.81□□□□□ -1.64
NEDD9-214ENST00000513989 COA5Q86WW8 74 aa4.81□□□□□ -1.64
NEDD9-214ENST00000513989 FCGBPQ9Y6R7 5405 aaPredicted RBP4.8□□□□□ -1.64
NEDD9-214ENST00000513989 MT2AP02795 61 aa4.78□□□□□ -1.64
NEDD9-214ENST00000513989 KRTAP10-10P60014 251 aa4.78□□□□□ -1.64
NEDD9-214ENST00000513989 H0YAA0 97 aa4.76□□□□□ -1.65
NEDD9-214ENST00000513989 MT1FP04733 61 aa4.76□□□□□ -1.65
NEDD9-214ENST00000513989 KRTAP4-9Q9BYQ8 210 aa4.74□□□□□ -1.65
NEDD9-214ENST00000513989 ADM2Q7Z4H4 148 aa4.73□□□□□ -1.65
NEDD9-214ENST00000513989 KRTAP9-3Q9BYQ3 159 aa4.73□□□□□ -1.65
NEDD9-214ENST00000513989 SYNE2Q8WXH0 6885 aaKnown RBP4.71□□□□□ -1.65
NEDD9-214ENST00000513989 SMIM26A0A096LP01 95 aa4.71□□□□□ -1.66
NEDD9-214ENST00000513989 SERP1Q9Y6X1 66 aa4.71□□□□□ -1.66
NEDD9-214ENST00000513989 CRIPTQ9P021 101 aa4.7□□□□□ -1.66
NEDD9-214ENST00000513989 MACF1Q9UPN3 7388 aaKnown RBP4.67□□□□□ -1.66
NEDD9-214ENST00000513989 PMAIP1Q13794 54 aa4.65□□□□□ -1.67
NEDD9-214ENST00000513989 A0A1B0GU69 56 aa4.61□□□□□ -1.67
NEDD9-214ENST00000513989 P0C880 135 aa4.61□□□□□ -1.67
NEDD9-214ENST00000513989 PRR15LQ9BU68 103 aa4.61□□□□□ -1.67
NEDD9-214ENST00000513989 R4GN34 69 aa4.61□□□□□ -1.67
NEDD9-214ENST00000513989 LCE5AQ5TCM9 118 aa4.6□□□□□ -1.67
NEDD9-214ENST00000513989 KRTAP4-2Q9BYR5 136 aa4.6□□□□□ -1.67
NEDD9-214ENST00000513989 KRTAP4-11Q9BYQ6 195 aa4.59□□□□□ -1.67
NEDD9-214ENST00000513989 M0QZ58 72 aa4.58□□□□□ -1.68
NEDD9-214ENST00000513989 KRTAP19-6Q3LI70 58 aa4.58□□□□□ -1.68
NEDD9-214ENST00000513989 SPRR2GQ9BYE4 73 aa4.57□□□□□ -1.68
NEDD9-214ENST00000513989 LINC01558Q9Y6Z2 57 aa4.56□□□□□ -1.68
NEDD9-214ENST00000513989 BRK1Q8WUW1 75 aa4.55□□□□□ -1.68
NEDD9-214ENST00000513989 A0A1B0GU33 70 aa4.54□□□□□ -1.68
NEDD9-214ENST00000513989 Q5VV11 94 aa4.51□□□□□ -1.69
NEDD9-214ENST00000513989 Q1T7F1 81 aa4.5□□□□□ -1.69
NEDD9-214ENST00000513989 LINC01554Q52M75 96 aa4.49□□□□□ -1.69
NEDD9-214ENST00000513989 KRTAP19-8Q3LI54 63 aa4.47□□□□□ -1.69
NEDD9-214ENST00000513989 PLAC4Q8WY50 150 aa4.47□□□□□ -1.69
NEDD9-214ENST00000513989 KRTAP6-3Q3LI67 103 aa4.45□□□□□ -1.7
NEDD9-214ENST00000513989 KTN1-AS1Q86SY8 53 aa4.44□□□□□ -1.7
NEDD9-214ENST00000513989 UQCR11O14957 56 aa4.43□□□□□ -1.7
NEDD9-214ENST00000513989 PSPHP1O15172 72 aa4.42□□□□□ -1.7
NEDD9-214ENST00000513989 SPATA8Q6RVD6 105 aa4.42□□□□□ -1.7
NEDD9-214ENST00000513989 A6NN06 94 aa4.4□□□□□ -1.71
NEDD9-214ENST00000513989 KRTAP13-4Q3LI77 160 aa4.4□□□□□ -1.71
NEDD9-214ENST00000513989 NEBP20929 6669 aa4.4□□□□□ -1.71
NEDD9-214ENST00000513989 A0A0D9SG42 100 aa4.39□□□□□ -1.71
NEDD9-214ENST00000513989 MT1BP07438 61 aa4.39□□□□□ -1.71
NEDD9-214ENST00000513989 MIR22HGQ0VDD5 57 aa4.35□□□□□ -1.71
NEDD9-214ENST00000513989 MUC12Q9UKN1 5478 aa4.35□□□□□ -1.71
NEDD9-214ENST00000513989 A6NED7 52 aa4.33□□□□□ -1.72
NEDD9-214ENST00000513989 SPINT4Q6UDR6 99 aa4.33□□□□□ -1.72
NEDD9-214ENST00000513989 PRO2289Q9P1D8 64 aa4.33□□□□□ -1.72
NEDD9-214ENST00000513989 CAMK2N1Q7Z7J9 78 aa4.31□□□□□ -1.72
NEDD9-214ENST00000513989 A8MU10 97 aa4.3□□□□□ -1.72
NEDD9-214ENST00000513989 K7ERS5 55 aa4.28□□□□□ -1.72
NEDD9-214ENST00000513989 KRTAP12-1P59990 96 aa4.27□□□□□ -1.73
NEDD9-214ENST00000513989 KRTAP10-5P60370 271 aa4.27□□□□□ -1.73
NEDD9-214ENST00000513989 KRTAP12-2P59991 146 aa4.23□□□□□ -1.73
NEDD9-214ENST00000513989 KMT2DO14686 5537 aa4.23□□□□□ -1.73
NEDD9-214ENST00000513989 KRTAP5-9P26371 169 aa4.21□□□□□ -1.74
NEDD9-214ENST00000513989 MT1XP80297 61 aa4.21□□□□□ -1.74
NEDD9-214ENST00000513989 CDC42SE1Q9NRR8 79 aa4.2□□□□□ -1.74
NEDD9-214ENST00000513989 MDN1Q9NU22 5596 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms