RNA–Protein interactions for RNA: ENST00000509535.5

RACK1-222, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-222	ENST00000509535	KRTAP2-4	Q9BYR9	128 aa		4.15	□□□□□ -1.75
RACK1-222	ENST00000509535	SCGB1A1	P11684	91 aa		4.14	□□□□□ -1.75
RACK1-222	ENST00000509535	FAM236A	A0A1B0GUQ0	79 aa		4.13	□□□□□ -1.75
RACK1-222	ENST00000509535	FAM236B	A0A1B0GV22	79 aa		4.13	□□□□□ -1.75
RACK1-222	ENST00000509535		H3BPC8	53 aa		4.13	□□□□□ -1.75
RACK1-222	ENST00000509535	SMIM20	Q8N5G0	67 aa		4.13	□□□□□ -1.75
RACK1-222	ENST00000509535	MDN1	Q9NU22	5596 aa		4.13	□□□□□ -1.75
RACK1-222	ENST00000509535	KMT2D	O14686	5537 aa		4.12	□□□□□ -1.75
RACK1-222	ENST00000509535	C4orf26	Q17RF5	130 aa		4.12	□□□□□ -1.75
RACK1-222	ENST00000509535	KRTAP3-1	Q9BYR8	98 aa		4.12	□□□□□ -1.75
RACK1-222	ENST00000509535	TRAV7	A0A075B6U4	112 aa		4.11	□□□□□ -1.75
RACK1-222	ENST00000509535	H1FX-AS1	Q4G0G2	97 aa		4.11	□□□□□ -1.75
RACK1-222	ENST00000509535	C1orf64	Q8NEQ6	169 aa		4.11	□□□□□ -1.75
RACK1-222	ENST00000509535	KRTAP5-9	P26371	169 aa		4.1	□□□□□ -1.75
RACK1-222	ENST00000509535	MP68	P56378	58 aa		4.1	□□□□□ -1.75
RACK1-222	ENST00000509535	LINC00208	Q96KT6	92 aa		4.1	□□□□□ -1.75
RACK1-222	ENST00000509535	KLKP1	Q107X0	134 aa		4.07	□□□□□ -1.76
RACK1-222	ENST00000509535		A6NN06	94 aa		4.05	□□□□□ -1.76
RACK1-222	ENST00000509535	SERP2	Q8N6R1	65 aa		4.05	□□□□□ -1.76
RACK1-222	ENST00000509535		A8MUN3	132 aa		4.01	□□□□□ -1.77
RACK1-222	ENST00000509535	KRTAP3-3	Q9BYR6	98 aa		4	□□□□□ -1.77
RACK1-222	ENST00000509535	COX7C	P15954	63 aa		3.99	□□□□□ -1.77
RACK1-222	ENST00000509535	KRTAP2-2	Q9BYT5	123 aa		3.99	□□□□□ -1.77
RACK1-222	ENST00000509535	KRTAP2-1	Q9BYU5	128 aa		3.99	□□□□□ -1.77
RACK1-222	ENST00000509535	LCA10	Q71F78	164 aa		3.98	□□□□□ -1.77
RACK1-222	ENST00000509535		S4R3F8	94 aa		3.98	□□□□□ -1.77
RACK1-222	ENST00000509535	C20orf197	Q8N268	126 aa		3.97	□□□□□ -1.77
RACK1-222	ENST00000509535	DMAC1	Q96GE9	116 aa		3.97	□□□□□ -1.77
RACK1-222	ENST00000509535	SNURF	Q9Y675	71 aa		3.97	□□□□□ -1.77
RACK1-222	ENST00000509535	SPRR2E	P22531	72 aa		3.94	□□□□□ -1.78
RACK1-222	ENST00000509535	SPRR2B	P35325	72 aa		3.94	□□□□□ -1.78
RACK1-222	ENST00000509535	SPRR2A	P35326	72 aa		3.94	□□□□□ -1.78
RACK1-222	ENST00000509535	CSAG1	Q6PB30	78 aa		3.94	□□□□□ -1.78
RACK1-222	ENST00000509535	SPANXA2-OT1	Q8N9U9	137 aa		3.94	□□□□□ -1.78
RACK1-222	ENST00000509535	ANAPC13	Q9BS18	74 aa		3.92	□□□□□ -1.78
RACK1-222	ENST00000509535	MT1B	P07438	61 aa		3.91	□□□□□ -1.78
RACK1-222	ENST00000509535	KRTAP10-5	P60370	271 aa		3.91	□□□□□ -1.78
RACK1-222	ENST00000509535	GPR98	Q8WXG9	6306 aa		3.91	□□□□□ -1.78
RACK1-222	ENST00000509535	NDUFC1	O43677	76 aa		3.9	□□□□□ -1.79
RACK1-222	ENST00000509535	ACYP2	P14621	99 aa		3.9	□□□□□ -1.79
RACK1-222	ENST00000509535		H7BZZ5	65 aa		3.89	□□□□□ -1.79
RACK1-222	ENST00000509535	SPRR2F	Q96RM1	72 aa		3.89	□□□□□ -1.79
RACK1-222	ENST00000509535	CYSTM1	Q9H1C7	97 aa		3.89	□□□□□ -1.79
RACK1-222	ENST00000509535		H0YAA0	97 aa		3.87	□□□□□ -1.79
RACK1-222	ENST00000509535		Q5VV11	94 aa		3.87	□□□□□ -1.79
RACK1-222	ENST00000509535	CCDC179	H3BU77	68 aa		3.86	□□□□□ -1.79
RACK1-222	ENST00000509535	SPRR2D	P22532	72 aa		3.82	□□□□□ -1.8
RACK1-222	ENST00000509535	LCE1A	Q5T7P2	110 aa		3.82	□□□□□ -1.8
RACK1-222	ENST00000509535	KRTAP19-8	Q3LI54	63 aa		3.81	□□□□□ -1.8
RACK1-222	ENST00000509535	SPTSSB	Q8NFR3	76 aa		3.79	□□□□□ -1.8
RACK1-222	ENST00000509535	SPRR2G	Q9BYE4	73 aa		3.79	□□□□□ -1.8
RACK1-222	ENST00000509535	KRTAP3-2	Q9BYR7	98 aa		3.79	□□□□□ -1.8
RACK1-222	ENST00000509535	COA5	Q86WW8	74 aa		3.78	□□□□□ -1.8
RACK1-222	ENST00000509535	CRIPT	Q9P021	101 aa		3.78	□□□□□ -1.8
RACK1-222	ENST00000509535	CHKB-CPT1B	H3BT56	60 aa		3.77	□□□□□ -1.81
RACK1-222	ENST00000509535	ADM2	Q7Z4H4	148 aa		3.77	□□□□□ -1.81
RACK1-222	ENST00000509535	ATP5E	P56381	51 aa	Predicted RBP	3.75	□□□□□ -1.81
RACK1-222	ENST00000509535		P0C880	135 aa		3.74	□□□□□ -1.81
RACK1-222	ENST00000509535	LCE3B	Q5TA77	95 aa		3.74	□□□□□ -1.81
RACK1-222	ENST00000509535	TMEM258	P61165	79 aa		3.73	□□□□□ -1.81
RACK1-222	ENST00000509535	KRTAP8-1	Q8IUC2	63 aa		3.71	□□□□□ -1.82
RACK1-222	ENST00000509535	DST	Q03001	7570 aa	Known RBP	3.66	□□□□□ -1.82
RACK1-222	ENST00000509535	PCP4	P48539	62 aa		3.65	□□□□□ -1.83
RACK1-222	ENST00000509535		R4GN34	69 aa		3.65	□□□□□ -1.83
RACK1-222	ENST00000509535		M0QZ58	72 aa		3.63	□□□□□ -1.83
RACK1-222	ENST00000509535	KRTAP4-9	Q9BYQ8	210 aa		3.62	□□□□□ -1.83
RACK1-222	ENST00000509535	SERP1	Q9Y6X1	66 aa		3.62	□□□□□ -1.83
RACK1-222	ENST00000509535	SEC61G	P60059	68 aa		3.6	□□□□□ -1.83
RACK1-222	ENST00000509535	KRTAP13-4	Q3LI77	160 aa		3.59	□□□□□ -1.83
RACK1-222	ENST00000509535	LINC01558	Q9Y6Z2	57 aa		3.59	□□□□□ -1.83
RACK1-222	ENST00000509535		A0A1B0GU69	56 aa		3.57	□□□□□ -1.84
RACK1-222	ENST00000509535	PRO2289	Q9P1D8	64 aa		3.57	□□□□□ -1.84
RACK1-222	ENST00000509535	KRTAP4-8	A0A0G2JLE6	195 aa		3.56	□□□□□ -1.84
RACK1-222	ENST00000509535		A0A1B0GU33	70 aa		3.56	□□□□□ -1.84
RACK1-222	ENST00000509535	KRTAP4-8	Q9BYQ9	185 aa		3.56	□□□□□ -1.84
RACK1-222	ENST00000509535	MT1X	P80297	61 aa		3.55	□□□□□ -1.84
RACK1-222	ENST00000509535	KRTAP12-2	P59991	146 aa		3.54	□□□□□ -1.84
RACK1-222	ENST00000509535	RPS28	P62857	69 aa	Known RBP	3.54	□□□□□ -1.84
RACK1-222	ENST00000509535	PLAC4	Q8WY50	150 aa		3.53	□□□□□ -1.84
RACK1-222	ENST00000509535	LINC01554	Q52M75	96 aa		3.52	□□□□□ -1.85
RACK1-222	ENST00000509535	PRR15L	Q9BU68	103 aa		3.51	□□□□□ -1.85
RACK1-222	ENST00000509535		Q1T7F1	81 aa		3.5	□□□□□ -1.85
RACK1-222	ENST00000509535	SPATA8	Q6RVD6	105 aa		3.5	□□□□□ -1.85
RACK1-222	ENST00000509535		V9GYY9	64 aa		3.49	□□□□□ -1.85
RACK1-222	ENST00000509535	AHNAK2	Q8IVF2	5795 aa		3.49	□□□□□ -1.85
RACK1-222	ENST00000509535	SMIM26	A0A096LP01	95 aa		3.48	□□□□□ -1.85
RACK1-222	ENST00000509535	LCE1D	Q5T752	114 aa		3.48	□□□□□ -1.85
RACK1-222	ENST00000509535	HMCN1	Q96RW7	5635 aa		3.48	□□□□□ -1.85
RACK1-222	ENST00000509535	KRTAP5-10	Q6L8G5	202 aa		3.46	□□□□□ -1.86
RACK1-222	ENST00000509535	KRTAP12-1	P59990	96 aa		3.44	□□□□□ -1.86
RACK1-222	ENST00000509535		A0A0D9SG42	100 aa		3.43	□□□□□ -1.86
RACK1-222	ENST00000509535	UQCR11	O14957	56 aa		3.43	□□□□□ -1.86
RACK1-222	ENST00000509535		A8MU10	97 aa		3.41	□□□□□ -1.86
RACK1-222	ENST00000509535	PSPHP1	O15172	72 aa		3.39	□□□□□ -1.87
RACK1-222	ENST00000509535	KRTAP10-7	P60409	375 aa	Predicted RBP	3.39	□□□□□ -1.87
RACK1-222	ENST00000509535	MT4	P47944	62 aa		3.38	□□□□□ -1.87
RACK1-222	ENST00000509535	KRTAP5-7	Q6L8G8	165 aa		3.38	□□□□□ -1.87
RACK1-222	ENST00000509535	SPINT4	Q6UDR6	99 aa		3.37	□□□□□ -1.87
RACK1-222	ENST00000509535	KRTAP10-12	P60413	245 aa		3.36	□□□□□ -1.87
RACK1-222	ENST00000509535	MIR22HG	Q0VDD5	57 aa		3.36	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms