RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 KRTAP10-10P60014 251 aa7.9□□□□□ -1.14
LMNA-222ENST00000508500 LOC101927531A0A1B0GV80 90 aa7.87□□□□□ -1.15
LMNA-222ENST00000508500 Q5W150 140 aa7.87□□□□□ -1.15
LMNA-222ENST00000508500 LINC00208Q96KT6 92 aa7.87□□□□□ -1.15
LMNA-222ENST00000508500 C1orf64Q8NEQ6 169 aa7.86□□□□□ -1.15
LMNA-222ENST00000508500 SNURFQ9Y675 71 aa7.82□□□□□ -1.16
LMNA-222ENST00000508500 IGKV2-30P06310 120 aa7.8□□□□□ -1.16
LMNA-222ENST00000508500 CYP4F30PQ9H0H9 118 aa7.78□□□□□ -1.16
LMNA-222ENST00000508500 H7BZZ5 65 aa7.76□□□□□ -1.17
LMNA-222ENST00000508500 C7orf65Q6ZTY9 151 aa7.76□□□□□ -1.17
LMNA-222ENST00000508500 KRTAP19-6Q3LI70 58 aa7.75□□□□□ -1.17
LMNA-222ENST00000508500 TMEM258P61165 79 aa7.74□□□□□ -1.17
LMNA-222ENST00000508500 MACF1Q9UPN3 7388 aaKnown RBP7.74□□□□□ -1.17
LMNA-222ENST00000508500 SPANXA2-OT1Q8N9U9 137 aa7.73□□□□□ -1.17
LMNA-222ENST00000508500 ATP5EP56381 51 aaPredicted RBP7.72□□□□□ -1.17
LMNA-222ENST00000508500 CYSTM1Q9H1C7 97 aa7.72□□□□□ -1.17
LMNA-222ENST00000508500 IGKV2D-30A0A075B6S6 120 aa7.7□□□□□ -1.18
LMNA-222ENST00000508500 H1FX-AS1Q4G0G2 97 aa7.66□□□□□ -1.18
LMNA-222ENST00000508500 SYNE2Q8WXH0 6885 aaKnown RBP7.63□□□□□ -1.19
LMNA-222ENST00000508500 A8MUN3 132 aa7.57□□□□□ -1.2
LMNA-222ENST00000508500 KRTAP6-3Q3LI67 103 aa7.57□□□□□ -1.2
LMNA-222ENST00000508500 DMAC1Q96GE9 116 aa7.54□□□□□ -1.2
LMNA-222ENST00000508500 ACYP2P14621 99 aa7.52□□□□□ -1.21
LMNA-222ENST00000508500 C4orf26Q17RF5 130 aa7.52□□□□□ -1.21
LMNA-222ENST00000508500 RPS28P62857 69 aaKnown RBP7.49□□□□□ -1.21
LMNA-222ENST00000508500 KRTAP3-1Q9BYR8 98 aa7.49□□□□□ -1.21
LMNA-222ENST00000508500 SERP1Q9Y6X1 66 aa7.49□□□□□ -1.21
LMNA-222ENST00000508500 COA5Q86WW8 74 aa7.39□□□□□ -1.23
LMNA-222ENST00000508500 CHKB-CPT1BH3BT56 60 aa7.34□□□□□ -1.23
LMNA-222ENST00000508500 MT1BP07438 61 aa7.34□□□□□ -1.23
LMNA-222ENST00000508500 LCA10Q71F78 164 aa7.34□□□□□ -1.23
LMNA-222ENST00000508500 S4R3F8 94 aa7.34□□□□□ -1.23
LMNA-222ENST00000508500 SPTSSBQ8NFR3 76 aa7.32□□□□□ -1.24
LMNA-222ENST00000508500 SMIM26A0A096LP01 95 aa7.29□□□□□ -1.24
LMNA-222ENST00000508500 CSAG1Q6PB30 78 aa7.29□□□□□ -1.24
LMNA-222ENST00000508500 SPRR2GQ9BYE4 73 aa7.29□□□□□ -1.24
LMNA-222ENST00000508500 KRTAP19-8Q3LI54 63 aa7.28□□□□□ -1.24
LMNA-222ENST00000508500 KRTAP3-3Q9BYR6 98 aa7.28□□□□□ -1.24
LMNA-222ENST00000508500 Q5VV11 94 aa7.23□□□□□ -1.25
LMNA-222ENST00000508500 V9GYY9 64 aa7.23□□□□□ -1.25
LMNA-222ENST00000508500 NEBP20929 6669 aa7.23□□□□□ -1.25
LMNA-222ENST00000508500 A6NN06 94 aa7.22□□□□□ -1.25
LMNA-222ENST00000508500 Q1T7F1 81 aa7.17□□□□□ -1.26
LMNA-222ENST00000508500 MUC12Q9UKN1 5478 aa7.17□□□□□ -1.26
LMNA-222ENST00000508500 KRTAP10-5P60370 271 aa7.16□□□□□ -1.26
LMNA-222ENST00000508500 KRTAP5-9P26371 169 aa7.14□□□□□ -1.27
LMNA-222ENST00000508500 LINC01558Q9Y6Z2 57 aa7.14□□□□□ -1.27
LMNA-222ENST00000508500 KRTAP20-1Q3LI63 56 aa7.12□□□□□ -1.27
LMNA-222ENST00000508500 PRR15LQ9BU68 103 aa7.07□□□□□ -1.28
LMNA-222ENST00000508500 SEC61GP60059 68 aa7.06□□□□□ -1.28
LMNA-222ENST00000508500 H0YAA0 97 aa7.04□□□□□ -1.28
LMNA-222ENST00000508500 CRIPTQ9P021 101 aa7.04□□□□□ -1.28
LMNA-222ENST00000508500 A0A1B0GU69 56 aa7.03□□□□□ -1.28
LMNA-222ENST00000508500 KMT2DO14686 5537 aa7□□□□□ -1.29
LMNA-222ENST00000508500 MDN1Q9NU22 5596 aa6.94□□□□□ -1.3
LMNA-222ENST00000508500 PSPHP1O15172 72 aa6.92□□□□□ -1.3
LMNA-222ENST00000508500 ADM2Q7Z4H4 148 aa6.91□□□□□ -1.3
LMNA-222ENST00000508500 KRTAP3-2Q9BYR7 98 aa6.88□□□□□ -1.31
LMNA-222ENST00000508500 KRTAP2-3P0C7H8 128 aa6.86□□□□□ -1.31
LMNA-222ENST00000508500 KRTAP2-4Q9BYR9 128 aa6.86□□□□□ -1.31
LMNA-222ENST00000508500 A0A1B0GU33 70 aa6.84□□□□□ -1.31
LMNA-222ENST00000508500 UQCR11O14957 56 aa6.84□□□□□ -1.31
LMNA-222ENST00000508500 MT1XP80297 61 aa6.84□□□□□ -1.31
LMNA-222ENST00000508500 P0C880 135 aa6.8□□□□□ -1.32
LMNA-222ENST00000508500 A6NED7 52 aa6.78□□□□□ -1.32
LMNA-222ENST00000508500 M0QZ58 72 aa6.78□□□□□ -1.32
LMNA-222ENST00000508500 SPATA8Q6RVD6 105 aa6.73□□□□□ -1.33
LMNA-222ENST00000508500 PRO2289Q9P1D8 64 aa6.73□□□□□ -1.33
LMNA-222ENST00000508500 PLAC4Q8WY50 150 aa6.72□□□□□ -1.33
LMNA-222ENST00000508500 SPRR2FQ96RM1 72 aa6.72□□□□□ -1.33
LMNA-222ENST00000508500 SPRR2EP22531 72 aa6.71□□□□□ -1.34
LMNA-222ENST00000508500 SPRR2BP35325 72 aa6.71□□□□□ -1.34
LMNA-222ENST00000508500 SPRR2AP35326 72 aa6.71□□□□□ -1.34
LMNA-222ENST00000508500 MIR22HGQ0VDD5 57 aa6.71□□□□□ -1.34
LMNA-222ENST00000508500 CDC42SE1Q9NRR8 79 aa6.7□□□□□ -1.34
LMNA-222ENST00000508500 R4GN34 69 aa6.7□□□□□ -1.34
LMNA-222ENST00000508500 KRTAP12-2P59991 146 aa6.67□□□□□ -1.34
LMNA-222ENST00000508500 LCE1AQ5T7P2 110 aa6.67□□□□□ -1.34
LMNA-222ENST00000508500 KRTAP8-1Q8IUC2 63 aa6.64□□□□□ -1.35
LMNA-222ENST00000508500 KRTAP2-2Q9BYT5 123 aa6.63□□□□□ -1.35
LMNA-222ENST00000508500 KRTAP2-1Q9BYU5 128 aa6.63□□□□□ -1.35
LMNA-222ENST00000508500 KRTAP4-8A0A0G2JLE6 195 aa6.62□□□□□ -1.35
LMNA-222ENST00000508500 KRTAP13-4Q3LI77 160 aa6.62□□□□□ -1.35
LMNA-222ENST00000508500 KRTAP4-8Q9BYQ9 185 aa6.62□□□□□ -1.35
LMNA-222ENST00000508500 BRK1Q8WUW1 75 aa6.61□□□□□ -1.35
LMNA-222ENST00000508500 LINC01554Q52M75 96 aa6.57□□□□□ -1.36
LMNA-222ENST00000508500 KRTAP10-7P60409 375 aaPredicted RBP6.54□□□□□ -1.36
LMNA-222ENST00000508500 K7ERS5 55 aa6.51□□□□□ -1.37
LMNA-222ENST00000508500 A8MU10 97 aa6.5□□□□□ -1.37
LMNA-222ENST00000508500 PRO0628Q9UI54 55 aa6.5□□□□□ -1.37
LMNA-222ENST00000508500 KRTAP10-12P60413 245 aa6.49□□□□□ -1.37
LMNA-222ENST00000508500 A0A0D9SG42 100 aa6.48□□□□□ -1.37
LMNA-222ENST00000508500 SPRR2DP22532 72 aa6.48□□□□□ -1.37
LMNA-222ENST00000508500 KRTAP12-1P59990 96 aa6.43□□□□□ -1.38
LMNA-222ENST00000508500 SPINT4Q6UDR6 99 aa6.38□□□□□ -1.39
LMNA-222ENST00000508500 LCE3BQ5TA77 95 aa6.35□□□□□ -1.39
LMNA-222ENST00000508500 PMAIP1Q13794 54 aa6.29□□□□□ -1.4
LMNA-222ENST00000508500 CAMK2N1Q7Z7J9 78 aa6.24□□□□□ -1.41
LMNA-222ENST00000508500 ROMO1P60602 79 aa6.16□□□□□ -1.42
LMNA-222ENST00000508500 KRTAP19-7Q3SYF9 63 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms