RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 ATP5EP2Q5VTU8 51 aa1.47□□□□□ -2.17
TCOF1-208ENST00000506063 CASC2Q6XLA1 102 aa1.47□□□□□ -2.17
TCOF1-208ENST00000506063 C7orf65Q6ZTY9 151 aa1.47□□□□□ -2.17
TCOF1-208ENST00000506063 WFDC13Q8IUB5 93 aa1.47□□□□□ -2.17
TCOF1-208ENST00000506063 KRTAP4-8Q9BYQ9 185 aa1.47□□□□□ -2.17
TCOF1-208ENST00000506063 HCG22E2RYF7 251 aa1.46□□□□□ -2.18
TCOF1-208ENST00000506063 CXCL6P80162 114 aa1.46□□□□□ -2.18
TCOF1-208ENST00000506063 LCE4AQ5TA78 99 aa1.46□□□□□ -2.18
TCOF1-208ENST00000506063 NOTCH2NLQ7Z3S9 236 aa1.46□□□□□ -2.18
TCOF1-208ENST00000506063 IGKV2D-30A0A075B6S6 120 aa1.45□□□□□ -2.18
TCOF1-208ENST00000506063 FAM240AA0A1B0GVK7 77 aa1.45□□□□□ -2.18
TCOF1-208ENST00000506063 IGKV2-30P06310 120 aa1.45□□□□□ -2.18
TCOF1-208ENST00000506063 SMCPP49901 116 aaPredicted RBP1.45□□□□□ -2.18
TCOF1-208ENST00000506063 ETDBQ3ZM63 59 aa1.45□□□□□ -2.18
TCOF1-208ENST00000506063 Q8N9L7 120 aa1.45□□□□□ -2.18
TCOF1-208ENST00000506063 SPRR2GQ9BYE4 73 aa1.45□□□□□ -2.18
TCOF1-208ENST00000506063 PRO0461Q9UI25 63 aa1.45□□□□□ -2.18
TCOF1-208ENST00000506063 MUC5ACP98088 5654 aa1.45□□□□□ -2.18
TCOF1-208ENST00000506063 J3QR89 54 aa1.44□□□□□ -2.18
TCOF1-208ENST00000506063 ACYP1P07311 99 aa1.44□□□□□ -2.18
TCOF1-208ENST00000506063 SPINK7P58062 85 aa1.44□□□□□ -2.18
TCOF1-208ENST00000506063 MUC5BQ9HC84 5762 aaPredicted RBP1.43□□□□□ -2.18
TCOF1-208ENST00000506063 HIST1H4AP62805 103 aaKnown RBP1.43□□□□□ -2.18
TCOF1-208ENST00000506063 KRTAP5-4Q6L8H1 288 aa1.43□□□□□ -2.18
TCOF1-208ENST00000506063 TP53AIP1Q9HCN2 124 aa1.43□□□□□ -2.18
TCOF1-208ENST00000506063 TRAV22A0A0B4J277 110 aa1.42□□□□□ -2.18
TCOF1-208ENST00000506063 KRTAP12-2P59991 146 aa1.42□□□□□ -2.18
TCOF1-208ENST00000506063 Q5W150 140 aa1.42□□□□□ -2.18
TCOF1-208ENST00000506063 A0A1B0GV90 55 aa1.41□□□□□ -2.18
TCOF1-208ENST00000506063 ATOX1O00244 68 aa1.41□□□□□ -2.18
TCOF1-208ENST00000506063 LINC00643Q86TS7 51 aa1.41□□□□□ -2.18
TCOF1-208ENST00000506063 FAM236AA0A1B0GUQ0 79 aa1.4□□□□□ -2.19
TCOF1-208ENST00000506063 FAM236BA0A1B0GV22 79 aa1.4□□□□□ -2.19
TCOF1-208ENST00000506063 LOC101927531A0A1B0GV80 90 aa1.4□□□□□ -2.19
TCOF1-208ENST00000506063 MP68P56378 58 aa1.4□□□□□ -2.19
TCOF1-208ENST00000506063 MT1XP80297 61 aa1.4□□□□□ -2.19
TCOF1-208ENST00000506063 H1FX-AS1Q4G0G2 97 aa1.4□□□□□ -2.19
TCOF1-208ENST00000506063 LCE5AQ5TCM9 118 aa1.4□□□□□ -2.19
TCOF1-208ENST00000506063 S4R3F8 94 aa1.4□□□□□ -2.19
TCOF1-208ENST00000506063 H0Y9P7 68 aa1.39□□□□□ -2.19
TCOF1-208ENST00000506063 UQCRQO14949 82 aa1.39□□□□□ -2.19
TCOF1-208ENST00000506063 C4orf26Q17RF5 130 aa1.39□□□□□ -2.19
TCOF1-208ENST00000506063 A0A087WVE0 104 aa1.38□□□□□ -2.19
TCOF1-208ENST00000506063 K7ERU9 68 aa1.38□□□□□ -2.19
TCOF1-208ENST00000506063 SCGB1A1P11684 91 aa1.38□□□□□ -2.19
TCOF1-208ENST00000506063 C1orf64Q8NEQ6 169 aa1.38□□□□□ -2.19
TCOF1-208ENST00000506063 A8MUN3 132 aa1.37□□□□□ -2.19
TCOF1-208ENST00000506063 C5orf47Q569G3 176 aa1.37□□□□□ -2.19
TCOF1-208ENST00000506063 H3BPC8 53 aa1.36□□□□□ -2.19
TCOF1-208ENST00000506063 CSAG1Q6PB30 78 aa1.36□□□□□ -2.19
TCOF1-208ENST00000506063 LINC00208Q96KT6 92 aa1.36□□□□□ -2.19
TCOF1-208ENST00000506063 IMUPQ9GZP8 106 aa1.36□□□□□ -2.19
TCOF1-208ENST00000506063 CYP4F30PQ9H0H9 118 aa1.36□□□□□ -2.19
TCOF1-208ENST00000506063 NDUFC1O43677 76 aa1.35□□□□□ -2.19
TCOF1-208ENST00000506063 KRTAP20-2Q3LI61 65 aa1.35□□□□□ -2.19
TCOF1-208ENST00000506063 SMIM20Q8N5G0 67 aa1.35□□□□□ -2.19
TCOF1-208ENST00000506063 KRTAP4-7Q9BYR0 210 aa1.35□□□□□ -2.19
TCOF1-208ENST00000506063 KRTAP5-8O75690 187 aa1.34□□□□□ -2.19
TCOF1-208ENST00000506063 LCA10Q71F78 164 aa1.34□□□□□ -2.19
TCOF1-208ENST00000506063 OCR1Q9BZK8 76 aa1.34□□□□□ -2.19
TCOF1-208ENST00000506063 C20orf197Q8N268 126 aa1.33□□□□□ -2.2
TCOF1-208ENST00000506063 TRAV7A0A075B6U4 112 aa1.32□□□□□ -2.2
TCOF1-208ENST00000506063 CHKB-CPT1BH3BT56 60 aa1.32□□□□□ -2.2
TCOF1-208ENST00000506063 MT-ATP8P03928 68 aa1.32□□□□□ -2.2
TCOF1-208ENST00000506063 KRTAP10-7P60409 375 aaPredicted RBP1.32□□□□□ -2.2
TCOF1-208ENST00000506063 KRTAP10-12P60413 245 aa1.32□□□□□ -2.2
TCOF1-208ENST00000506063 KLKP1Q107X0 134 aa1.32□□□□□ -2.2
TCOF1-208ENST00000506063 SPTSSBQ8NFR3 76 aa1.32□□□□□ -2.2
TCOF1-208ENST00000506063 DMAC1Q96GE9 116 aa1.32□□□□□ -2.2
TCOF1-208ENST00000506063 KRTAP4-11Q9BYQ6 195 aa1.32□□□□□ -2.2
TCOF1-208ENST00000506063 KRTAP19-3Q7Z4W3 81 aa1.31□□□□□ -2.2
TCOF1-208ENST00000506063 CRIPTQ9P021 101 aa1.31□□□□□ -2.2
TCOF1-208ENST00000506063 H0YAA0 97 aa1.3□□□□□ -2.2
TCOF1-208ENST00000506063 KRTAP3-1Q9BYR8 98 aa1.3□□□□□ -2.2
TCOF1-208ENST00000506063 PRO2289Q9P1D8 64 aa1.3□□□□□ -2.2
TCOF1-208ENST00000506063 ACYP2P14621 99 aa1.29□□□□□ -2.2
TCOF1-208ENST00000506063 ADM2Q7Z4H4 148 aa1.29□□□□□ -2.2
TCOF1-208ENST00000506063 SERP2Q8N6R1 65 aa1.29□□□□□ -2.2
TCOF1-208ENST00000506063 CYSTM1Q9H1C7 97 aa1.29□□□□□ -2.2
TCOF1-208ENST00000506063 R4GN34 69 aa1.29□□□□□ -2.2
TCOF1-208ENST00000506063 KRTAP4-2Q9BYR5 136 aa1.28□□□□□ -2.2
TCOF1-208ENST00000506063 KRTAP3-3Q9BYR6 98 aa1.28□□□□□ -2.2
TCOF1-208ENST00000506063 SNURFQ9Y675 71 aa1.28□□□□□ -2.2
TCOF1-208ENST00000506063 M0QZ58 72 aa1.27□□□□□ -2.21
TCOF1-208ENST00000506063 KRTAP19-7Q3SYF9 63 aa1.27□□□□□ -2.21
TCOF1-208ENST00000506063 KRTAP5-2Q701N4 177 aa1.27□□□□□ -2.21
TCOF1-208ENST00000506063 SPANXA2-OT1Q8N9U9 137 aa1.27□□□□□ -2.21
TCOF1-208ENST00000506063 KRTAP9-9Q9BYP9 154 aa1.27□□□□□ -2.21
TCOF1-208ENST00000506063 MT1EP04732 61 aa1.26□□□□□ -2.21
TCOF1-208ENST00000506063 PLAC4Q8WY50 150 aa1.26□□□□□ -2.21
TCOF1-208ENST00000506063 KRTAP9-4Q9BYQ2 154 aa1.26□□□□□ -2.21
TCOF1-208ENST00000506063 COX7CP15954 63 aa1.25□□□□□ -2.21
TCOF1-208ENST00000506063 SEC61GP60059 68 aa1.25□□□□□ -2.21
TCOF1-208ENST00000506063 LINC01554Q52M75 96 aa1.25□□□□□ -2.21
TCOF1-208ENST00000506063 ANAPC13Q9BS18 74 aa1.25□□□□□ -2.21
TCOF1-208ENST00000506063 ATP5EP56381 51 aaPredicted RBP1.24□□□□□ -2.21
TCOF1-208ENST00000506063 COA5Q86WW8 74 aa1.24□□□□□ -2.21
TCOF1-208ENST00000506063 P0C880 135 aa1.23□□□□□ -2.21
TCOF1-208ENST00000506063 KRTAP4-3Q9BYR4 195 aa1.23□□□□□ -2.21
TCOF1-208ENST00000506063 SERP1Q9Y6X1 66 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms