RNA–Protein interactions for RNA: ENST00000504273.5

SNX25-202, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX25, Length 3,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-202ENST00000504273 IGLV7-46A0A075B6I9 117 aa3.99□□□□□ -1.77
SNX25-202ENST00000504273 KRTAP10-4P60372 401 aaPredicted RBP3.98□□□□□ -1.77
SNX25-202ENST00000504273 FAT4Q6V0I7 4981 aa3.98□□□□□ -1.77
SNX25-202ENST00000504273 LINC01558Q9Y6Z2 57 aa3.98□□□□□ -1.77
SNX25-202ENST00000504273 CRIPTQ9P021 101 aa3.96□□□□□ -1.78
SNX25-202ENST00000504273 HRES1P13985 223 aa3.94□□□□□ -1.78
SNX25-202ENST00000504273 SMR3BP02814 79 aaPredicted RBP3.93□□□□□ -1.78
SNX25-202ENST00000504273 KRTAP9-7A8MTY7 169 aa3.92□□□□□ -1.78
SNX25-202ENST00000504273 TYMSOSQ8TAI1 123 aa3.92□□□□□ -1.78
SNX25-202ENST00000504273 ROMO1P60602 79 aa3.91□□□□□ -1.78
SNX25-202ENST00000504273 TNXBP22105 4242 aa3.91□□□□□ -1.78
SNX25-202ENST00000504273 MIR22HGQ0VDD5 57 aa3.91□□□□□ -1.78
SNX25-202ENST00000504273 SPINK1P00995 79 aa3.9□□□□□ -1.79
SNX25-202ENST00000504273 MUC2Q02817 5179 aa3.89□□□□□ -1.79
SNX25-202ENST00000504273 IGKV2-30P06310 120 aa3.89□□□□□ -1.79
SNX25-202ENST00000504273 A0A1B0GU69 56 aa3.87□□□□□ -1.79
SNX25-202ENST00000504273 LINC00304Q8N9R0 145 aa3.87□□□□□ -1.79
SNX25-202ENST00000504273 FAT3Q8TDW7 4589 aa3.87□□□□□ -1.79
SNX25-202ENST00000504273 RPS29P62273 56 aaKnown RBP3.87□□□□□ -1.79
SNX25-202ENST00000504273 LRP1Q07954 4544 aaKnown RBP3.87□□□□□ -1.79
SNX25-202ENST00000504273 P0C880 135 aa3.87□□□□□ -1.79
SNX25-202ENST00000504273 DMAC1Q96GE9 116 aa3.85□□□□□ -1.79
SNX25-202ENST00000504273 NDUFAF8A1L188 74 aa3.82□□□□□ -1.8
SNX25-202ENST00000504273 MT1HL1P0DM35 61 aa3.81□□□□□ -1.8
SNX25-202ENST00000504273 UQCR11O14957 56 aa3.81□□□□□ -1.8
SNX25-202ENST00000504273 IGKV2D-30A0A075B6S6 120 aa3.8□□□□□ -1.8
SNX25-202ENST00000504273 ACYP2P14621 99 aa3.8□□□□□ -1.8
SNX25-202ENST00000504273 SPATA8Q6RVD6 105 aa3.8□□□□□ -1.8
SNX25-202ENST00000504273 A8MUU9 505 aa3.8□□□□□ -1.8
SNX25-202ENST00000504273 C9orf92A6NGG3 77 aa3.8□□□□□ -1.8
SNX25-202ENST00000504273 C20orf166-AS1Q96NR2 134 aa3.8□□□□□ -1.8
SNX25-202ENST00000504273 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.78□□□□□ -1.8
SNX25-202ENST00000504273 LRP2P98164 4655 aa3.78□□□□□ -1.8
SNX25-202ENST00000504273 KRTAP10-8P60410 259 aa3.78□□□□□ -1.8
SNX25-202ENST00000504273 KRTAP25-1Q3LHN0 102 aa3.78□□□□□ -1.8
SNX25-202ENST00000504273 KRTAP23-1A1A580 65 aa3.77□□□□□ -1.81
SNX25-202ENST00000504273 SPINT4Q6UDR6 99 aa3.77□□□□□ -1.81
SNX25-202ENST00000504273 KRTAP3-1Q9BYR8 98 aa3.76□□□□□ -1.81
SNX25-202ENST00000504273 SEC61BP60468 96 aaKnown RBP3.67□□□□□ -1.82
SNX25-202ENST00000504273 LPAP08519 4548 aa3.66□□□□□ -1.82
SNX25-202ENST00000504273 XP32Q5T750 250 aa3.65□□□□□ -1.83
SNX25-202ENST00000504273 RPL37P61927 97 aaKnown RBP3.64□□□□□ -1.83
SNX25-202ENST00000504273 COX6B2Q6YFQ2 88 aa3.62□□□□□ -1.83
SNX25-202ENST00000504273 H0YAA0 97 aa3.62□□□□□ -1.83
SNX25-202ENST00000504273 LUZP6Q538Z0 58 aa3.62□□□□□ -1.83
SNX25-202ENST00000504273 C10orf95Q9H7T3 257 aa3.62□□□□□ -1.83
SNX25-202ENST00000504273 TPRXLQ17RH7 258 aa3.55□□□□□ -1.84
SNX25-202ENST00000504273 MUC17Q685J3 4493 aa3.54□□□□□ -1.84
SNX25-202ENST00000504273 A0A1B0GU33 70 aa3.53□□□□□ -1.84
SNX25-202ENST00000504273 KRTAP10-6P60371 365 aaPredicted RBP3.53□□□□□ -1.84
SNX25-202ENST00000504273 SSPOA2VEC9 5147 aa3.53□□□□□ -1.84
SNX25-202ENST00000504273 H1FX-AS1Q4G0G2 97 aa3.53□□□□□ -1.84
SNX25-202ENST00000504273 KRTAP15-1Q3LI76 137 aa3.52□□□□□ -1.85
SNX25-202ENST00000504273 A0A0D9SG42 100 aa3.52□□□□□ -1.85
SNX25-202ENST00000504273 K7ERS5 55 aa3.52□□□□□ -1.85
SNX25-202ENST00000504273 FSIP2Q5CZC0 6907 aa3.5□□□□□ -1.85
SNX25-202ENST00000504273 KRTAP13-4Q3LI77 160 aa3.49□□□□□ -1.85
SNX25-202ENST00000504273 S4R3F8 94 aa3.48□□□□□ -1.85
SNX25-202ENST00000504273 KRTAP4-1Q9BYQ7 146 aa3.46□□□□□ -1.86
SNX25-202ENST00000504273 KRTAP20-1Q3LI63 56 aa3.44□□□□□ -1.86
SNX25-202ENST00000504273 KRTAP6-3Q3LI67 103 aa3.44□□□□□ -1.86
SNX25-202ENST00000504273 KRTAP19-2Q3LHN2 52 aa3.42□□□□□ -1.86
SNX25-202ENST00000504273 FLGP20930 4061 aaPredicted RBP3.34□□□□□ -1.87
SNX25-202ENST00000504273 KRTAP12-2P59991 146 aa3.34□□□□□ -1.87
SNX25-202ENST00000504273 KRTAP12-1P59990 96 aa3.32□□□□□ -1.88
SNX25-202ENST00000504273 MT1HP80294 61 aa3.29□□□□□ -1.88
SNX25-202ENST00000504273 LCE4AQ5TA78 99 aa3.28□□□□□ -1.88
SNX25-202ENST00000504273 NEBP20929 6669 aa3.28□□□□□ -1.88
SNX25-202ENST00000504273 M0QZ58 72 aa3.27□□□□□ -1.89
SNX25-202ENST00000504273 KRTAP19-1Q8IUB9 90 aa3.27□□□□□ -1.89
SNX25-202ENST00000504273 USH2AO75445 5202 aa3.26□□□□□ -1.89
SNX25-202ENST00000504273 FCGBPQ9Y6R7 5405 aaPredicted RBP3.24□□□□□ -1.89
SNX25-202ENST00000504273 KRTAP2-3P0C7H8 128 aa3.23□□□□□ -1.89
SNX25-202ENST00000504273 PLAC4Q8WY50 150 aa3.23□□□□□ -1.89
SNX25-202ENST00000504273 KRTAP2-4Q9BYR9 128 aa3.23□□□□□ -1.89
SNX25-202ENST00000504273 M0R2T5 61 aa3.21□□□□□ -1.9
SNX25-202ENST00000504273 R4GN34 69 aa3.19□□□□□ -1.9
SNX25-202ENST00000504273 SYNE2Q8WXH0 6885 aaKnown RBP3.17□□□□□ -1.9
SNX25-202ENST00000504273 MACF1Q9UPN3 7388 aaKnown RBP3.16□□□□□ -1.9
SNX25-202ENST00000504273 KRTAP19-6Q3LI70 58 aa3.15□□□□□ -1.9
SNX25-202ENST00000504273 KRTAP19-4Q3LI73 84 aa3.14□□□□□ -1.91
SNX25-202ENST00000504273 GPR98Q8WXG9 6306 aa3.13□□□□□ -1.91
SNX25-202ENST00000504273 KRTAP9-4Q9BYQ2 154 aa3.13□□□□□ -1.91
SNX25-202ENST00000504273 KRTAP9-9Q9BYP9 154 aa3.11□□□□□ -1.91
SNX25-202ENST00000504273 KRTAP2-2Q9BYT5 123 aa3.08□□□□□ -1.92
SNX25-202ENST00000504273 KRTAP2-1Q9BYU5 128 aa3.08□□□□□ -1.92
SNX25-202ENST00000504273 CAMK2N1Q7Z7J9 78 aa3.04□□□□□ -1.92
SNX25-202ENST00000504273 SPRR2GQ9BYE4 73 aa3.04□□□□□ -1.92
SNX25-202ENST00000504273 KRTAP9-8Q9BYQ0 159 aa3.04□□□□□ -1.92
SNX25-202ENST00000504273 MT1FP04733 61 aa3.03□□□□□ -1.92
SNX25-202ENST00000504273 MT2AP02795 61 aa3.03□□□□□ -1.93
SNX25-202ENST00000504273 KRTAP5-9P26371 169 aa3□□□□□ -1.93
SNX25-202ENST00000504273 PRO2289Q9P1D8 64 aa2.97□□□□□ -1.93
SNX25-202ENST00000504273 KRTAP9-3Q9BYQ3 159 aa2.96□□□□□ -1.93
SNX25-202ENST00000504273 KRTAP10-10P60014 251 aa2.94□□□□□ -1.94
SNX25-202ENST00000504273 KRTAP19-8Q3LI54 63 aa2.94□□□□□ -1.94
SNX25-202ENST00000504273 KRTAP4-12Q9BQ66 201 aa2.94□□□□□ -1.94
SNX25-202ENST00000504273 LCE5AQ5TCM9 118 aa2.93□□□□□ -1.94
SNX25-202ENST00000504273 LOC100996750A0A140TA64 210 aa2.92□□□□□ -1.94
SNX25-202ENST00000504273 MT1BP07438 61 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms