RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 PCP4P48539 62 aa7.55□□□□□ -1.2
GAPDH-210ENST00000496049 MT1HP80294 61 aa7.55□□□□□ -1.2
GAPDH-210ENST00000496049 SPANXA2-OT1Q8N9U9 137 aa7.55□□□□□ -1.2
GAPDH-210ENST00000496049 H7BZZ5 65 aa7.53□□□□□ -1.2
GAPDH-210ENST00000496049 KRTAP10-6P60371 365 aaPredicted RBP7.53□□□□□ -1.2
GAPDH-210ENST00000496049 CYSTM1Q9H1C7 97 aa7.52□□□□□ -1.21
GAPDH-210ENST00000496049 H1FX-AS1Q4G0G2 97 aa7.51□□□□□ -1.21
GAPDH-210ENST00000496049 DMAC1Q96GE9 116 aa7.5□□□□□ -1.21
GAPDH-210ENST00000496049 KRTAP19-2Q3LHN2 52 aa7.47□□□□□ -1.21
GAPDH-210ENST00000496049 ATP5EP56381 51 aaPredicted RBP7.46□□□□□ -1.22
GAPDH-210ENST00000496049 MACF1Q9UPN3 7388 aaKnown RBP7.45□□□□□ -1.22
GAPDH-210ENST00000496049 KRTAP3-1Q9BYR8 98 aa7.45□□□□□ -1.22
GAPDH-210ENST00000496049 ACYP2P14621 99 aa7.44□□□□□ -1.22
GAPDH-210ENST00000496049 TMEM258P61165 79 aa7.44□□□□□ -1.22
GAPDH-210ENST00000496049 S4R3F8 94 aa7.42□□□□□ -1.22
GAPDH-210ENST00000496049 M0R2T5 61 aa7.38□□□□□ -1.23
GAPDH-210ENST00000496049 CHKB-CPT1BH3BT56 60 aa7.36□□□□□ -1.23
GAPDH-210ENST00000496049 FLGP20930 4061 aaPredicted RBP7.34□□□□□ -1.23
GAPDH-210ENST00000496049 LCA10Q71F78 164 aa7.33□□□□□ -1.24
GAPDH-210ENST00000496049 SPTSSBQ8NFR3 76 aa7.31□□□□□ -1.24
GAPDH-210ENST00000496049 COA5Q86WW8 74 aa7.3□□□□□ -1.24
GAPDH-210ENST00000496049 CSAG1Q6PB30 78 aa7.27□□□□□ -1.25
GAPDH-210ENST00000496049 KRTAP19-1Q8IUB9 90 aa7.26□□□□□ -1.25
GAPDH-210ENST00000496049 NEBP20929 6669 aa7.24□□□□□ -1.25
GAPDH-210ENST00000496049 KRTAP3-3Q9BYR6 98 aa7.21□□□□□ -1.26
GAPDH-210ENST00000496049 SERP1Q9Y6X1 66 aa7.19□□□□□ -1.26
GAPDH-210ENST00000496049 KRTAP6-3Q3LI67 103 aa7.1□□□□□ -1.27
GAPDH-210ENST00000496049 H0YAA0 97 aa7.08□□□□□ -1.28
GAPDH-210ENST00000496049 KRTAP20-1Q3LI63 56 aa7.05□□□□□ -1.28
GAPDH-210ENST00000496049 SEC61GP60059 68 aa7.04□□□□□ -1.28
GAPDH-210ENST00000496049 RPS28P62857 69 aaKnown RBP7.02□□□□□ -1.29
GAPDH-210ENST00000496049 ADM2Q7Z4H4 148 aa7.02□□□□□ -1.29
GAPDH-210ENST00000496049 LCE2BO14633 110 aa6.99□□□□□ -1.29
GAPDH-210ENST00000496049 MT2AP02795 61 aa6.98□□□□□ -1.29
GAPDH-210ENST00000496049 KRTAP9-8Q9BYQ0 159 aa6.98□□□□□ -1.29
GAPDH-210ENST00000496049 SMIM26A0A096LP01 95 aa6.96□□□□□ -1.3
GAPDH-210ENST00000496049 KRTAP10-10P60014 251 aa6.96□□□□□ -1.3
GAPDH-210ENST00000496049 PRR15LQ9BU68 103 aa6.96□□□□□ -1.3
GAPDH-210ENST00000496049 A0A1B0GU69 56 aa6.95□□□□□ -1.3
GAPDH-210ENST00000496049 V9GYY9 64 aa6.95□□□□□ -1.3
GAPDH-210ENST00000496049 MUC12Q9UKN1 5478 aa6.95□□□□□ -1.3
GAPDH-210ENST00000496049 MT1FP04733 61 aa6.92□□□□□ -1.3
GAPDH-210ENST00000496049 LINC01558Q9Y6Z2 57 aa6.92□□□□□ -1.3
GAPDH-210ENST00000496049 CRIPTQ9P021 101 aa6.9□□□□□ -1.3
GAPDH-210ENST00000496049 KRTAP3-2Q9BYR7 98 aa6.89□□□□□ -1.31
GAPDH-210ENST00000496049 P0C880 135 aa6.88□□□□□ -1.31
GAPDH-210ENST00000496049 Q1T7F1 81 aa6.87□□□□□ -1.31
GAPDH-210ENST00000496049 KRTAP19-6Q3LI70 58 aa6.85□□□□□ -1.31
GAPDH-210ENST00000496049 R4GN34 69 aa6.83□□□□□ -1.32
GAPDH-210ENST00000496049 A0A1B0GU33 70 aa6.79□□□□□ -1.32
GAPDH-210ENST00000496049 M0QZ58 72 aa6.79□□□□□ -1.32
GAPDH-210ENST00000496049 KRTAP9-3Q9BYQ3 159 aa6.79□□□□□ -1.32
GAPDH-210ENST00000496049 PSPHP1O15172 72 aa6.76□□□□□ -1.33
GAPDH-210ENST00000496049 SPRR2GQ9BYE4 73 aa6.73□□□□□ -1.33
GAPDH-210ENST00000496049 UQCR11O14957 56 aa6.69□□□□□ -1.34
GAPDH-210ENST00000496049 Q5VV11 94 aa6.69□□□□□ -1.34
GAPDH-210ENST00000496049 KMT2DO14686 5537 aa6.67□□□□□ -1.34
GAPDH-210ENST00000496049 LINC01554Q52M75 96 aa6.67□□□□□ -1.34
GAPDH-210ENST00000496049 KRTAP13-4Q3LI77 160 aa6.64□□□□□ -1.35
GAPDH-210ENST00000496049 SPATA8Q6RVD6 105 aa6.64□□□□□ -1.35
GAPDH-210ENST00000496049 MDN1Q9NU22 5596 aa6.64□□□□□ -1.35
GAPDH-210ENST00000496049 A6NED7 52 aa6.61□□□□□ -1.35
GAPDH-210ENST00000496049 GPR98Q8WXG9 6306 aa6.59□□□□□ -1.35
GAPDH-210ENST00000496049 KRTAP2-3P0C7H8 128 aa6.58□□□□□ -1.36
GAPDH-210ENST00000496049 MIR22HGQ0VDD5 57 aa6.58□□□□□ -1.36
GAPDH-210ENST00000496049 KRTAP19-8Q3LI54 63 aa6.58□□□□□ -1.36
GAPDH-210ENST00000496049 KRTAP2-4Q9BYR9 128 aa6.58□□□□□ -1.36
GAPDH-210ENST00000496049 A0A0D9SG42 100 aa6.57□□□□□ -1.36
GAPDH-210ENST00000496049 A6NN06 94 aa6.55□□□□□ -1.36
GAPDH-210ENST00000496049 PLAC4Q8WY50 150 aa6.54□□□□□ -1.36
GAPDH-210ENST00000496049 A8MU10 97 aa6.5□□□□□ -1.37
GAPDH-210ENST00000496049 MT1BP07438 61 aa6.48□□□□□ -1.37
GAPDH-210ENST00000496049 SPINT4Q6UDR6 99 aa6.46□□□□□ -1.38
GAPDH-210ENST00000496049 K7ERS5 55 aa6.43□□□□□ -1.38
GAPDH-210ENST00000496049 CDC42SE1Q9NRR8 79 aa6.43□□□□□ -1.38
GAPDH-210ENST00000496049 KRTAP12-1P59990 96 aa6.41□□□□□ -1.38
GAPDH-210ENST00000496049 CAMK2N1Q7Z7J9 78 aa6.4□□□□□ -1.38
GAPDH-210ENST00000496049 KRTAP5-9P26371 169 aa6.39□□□□□ -1.39
GAPDH-210ENST00000496049 KRTAP12-2P59991 146 aa6.38□□□□□ -1.39
GAPDH-210ENST00000496049 PRO2289Q9P1D8 64 aa6.34□□□□□ -1.39
GAPDH-210ENST00000496049 BRK1Q8WUW1 75 aa6.33□□□□□ -1.4
GAPDH-210ENST00000496049 KRTAP2-2Q9BYT5 123 aa6.31□□□□□ -1.4
GAPDH-210ENST00000496049 KRTAP2-1Q9BYU5 128 aa6.31□□□□□ -1.4
GAPDH-210ENST00000496049 KRTAP10-5P60370 271 aa6.25□□□□□ -1.41
GAPDH-210ENST00000496049 MT1XP80297 61 aa6.23□□□□□ -1.41
GAPDH-210ENST00000496049 SPRR2EP22531 72 aa6.2□□□□□ -1.42
GAPDH-210ENST00000496049 SPRR2BP35325 72 aa6.2□□□□□ -1.42
GAPDH-210ENST00000496049 SPRR2AP35326 72 aa6.2□□□□□ -1.42
GAPDH-210ENST00000496049 SPRR2FQ96RM1 72 aa6.07□□□□□ -1.44
GAPDH-210ENST00000496049 C10orf95Q9H7T3 257 aa6.06□□□□□ -1.44
GAPDH-210ENST00000496049 PRO0628Q9UI54 55 aa6.05□□□□□ -1.44
GAPDH-210ENST00000496049 ROMO1P60602 79 aa6.03□□□□□ -1.44
GAPDH-210ENST00000496049 TNP1P09430 55 aa6.02□□□□□ -1.45
GAPDH-210ENST00000496049 SPRR2DP22532 72 aa6□□□□□ -1.45
GAPDH-210ENST00000496049 PMAIP1Q13794 54 aa5.97□□□□□ -1.45
GAPDH-210ENST00000496049 KRTAP25-1Q3LHN0 102 aa5.96□□□□□ -1.46
GAPDH-210ENST00000496049 KRTAP10-7P60409 375 aaPredicted RBP5.95□□□□□ -1.46
GAPDH-210ENST00000496049 LCE1AQ5T7P2 110 aa5.95□□□□□ -1.46
GAPDH-210ENST00000496049 KRTAP10-12P60413 245 aa5.93□□□□□ -1.46
GAPDH-210ENST00000496049 LCE3BQ5TA77 95 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms