RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 MT1BP07438 61 aa10.86□□□□□ -0.67
HLA-C-209ENST00000495835 H0Y9P7 68 aa10.84□□□□□ -0.67
HLA-C-209ENST00000495835 KRTAP6-3Q3LI67 103 aa10.83□□□□□ -0.68
HLA-C-209ENST00000495835 LINC00643Q86TS7 51 aa10.83□□□□□ -0.68
HLA-C-209ENST00000495835 CRIPTQ9P021 101 aa10.83□□□□□ -0.68
HLA-C-209ENST00000495835 A0A087WVE0 104 aa10.79□□□□□ -0.68
HLA-C-209ENST00000495835 A6NN06 94 aa10.79□□□□□ -0.68
HLA-C-209ENST00000495835 IMUPQ9GZP8 106 aa10.78□□□□□ -0.68
HLA-C-209ENST00000495835 A8MUN3 132 aa10.75□□□□□ -0.69
HLA-C-209ENST00000495835 NDUFC1O43677 76 aa10.75□□□□□ -0.69
HLA-C-209ENST00000495835 H0YAA0 97 aa10.72□□□□□ -0.69
HLA-C-209ENST00000495835 KRTAP10-5P60370 271 aa10.66□□□□□ -0.7
HLA-C-209ENST00000495835 LINC00208Q96KT6 92 aa10.66□□□□□ -0.7
HLA-C-209ENST00000495835 MP68P56378 58 aa10.64□□□□□ -0.71
HLA-C-209ENST00000495835 OCR1Q9BZK8 76 aa10.63□□□□□ -0.71
HLA-C-209ENST00000495835 A0A1B0GV90 55 aa10.57□□□□□ -0.72
HLA-C-209ENST00000495835 J3QR89 54 aa10.54□□□□□ -0.72
HLA-C-209ENST00000495835 H3BPC8 53 aa10.53□□□□□ -0.72
HLA-C-209ENST00000495835 ADM2Q7Z4H4 148 aa10.49□□□□□ -0.73
HLA-C-209ENST00000495835 SCGB1A1P11684 91 aa10.39□□□□□ -0.75
HLA-C-209ENST00000495835 MUC12Q9UKN1 5478 aa10.38□□□□□ -0.75
HLA-C-209ENST00000495835 DMAC1Q96GE9 116 aa10.36□□□□□ -0.75
HLA-C-209ENST00000495835 C20orf197Q8N268 126 aa10.35□□□□□ -0.75
HLA-C-209ENST00000495835 NEBP20929 6669 aa10.33□□□□□ -0.76
HLA-C-209ENST00000495835 KRTAP5-9P26371 169 aa10.32□□□□□ -0.76
HLA-C-209ENST00000495835 PRO2289Q9P1D8 64 aa10.3□□□□□ -0.76
HLA-C-209ENST00000495835 R4GN34 69 aa10.28□□□□□ -0.76
HLA-C-209ENST00000495835 PLAC4Q8WY50 150 aa10.26□□□□□ -0.77
HLA-C-209ENST00000495835 P0C880 135 aa10.22□□□□□ -0.77
HLA-C-209ENST00000495835 TRAV7A0A075B6U4 112 aa10.2□□□□□ -0.78
HLA-C-209ENST00000495835 MT1XP80297 61 aa10.17□□□□□ -0.78
HLA-C-209ENST00000495835 SMIM20Q8N5G0 67 aa10.17□□□□□ -0.78
HLA-C-209ENST00000495835 KMT2DO14686 5537 aa10.17□□□□□ -0.78
HLA-C-209ENST00000495835 M0QZ58 72 aa10.16□□□□□ -0.78
HLA-C-209ENST00000495835 KRTAP3-2Q9BYR7 98 aa10.15□□□□□ -0.78
HLA-C-209ENST00000495835 ACYP2P14621 99 aa10.14□□□□□ -0.79
HLA-C-209ENST00000495835 MDN1Q9NU22 5596 aa10.09□□□□□ -0.79
HLA-C-209ENST00000495835 K7ERU9 68 aa10.07□□□□□ -0.8
HLA-C-209ENST00000495835 MT-ATP8P03928 68 aa10.06□□□□□ -0.8
HLA-C-209ENST00000495835 SPTSSBQ8NFR3 76 aa10.06□□□□□ -0.8
HLA-C-209ENST00000495835 KRTAP12-2P59991 146 aa10.02□□□□□ -0.81
HLA-C-209ENST00000495835 KRTAP20-1Q3LI63 56 aa10.01□□□□□ -0.81
HLA-C-209ENST00000495835 LINC01554Q52M75 96 aa9.97□□□□□ -0.81
HLA-C-209ENST00000495835 SPRR2FQ96RM1 72 aa9.93□□□□□ -0.82
HLA-C-209ENST00000495835 KRTAP8-1Q8IUC2 63 aa9.9□□□□□ -0.82
HLA-C-209ENST00000495835 CHKB-CPT1BH3BT56 60 aa9.89□□□□□ -0.83
HLA-C-209ENST00000495835 SPANXA2-OT1Q8N9U9 137 aa9.83□□□□□ -0.84
HLA-C-209ENST00000495835 SNURFQ9Y675 71 aa9.82□□□□□ -0.84
HLA-C-209ENST00000495835 SPRR2EP22531 72 aa9.8□□□□□ -0.84
HLA-C-209ENST00000495835 SPRR2BP35325 72 aa9.8□□□□□ -0.84
HLA-C-209ENST00000495835 SPRR2AP35326 72 aa9.8□□□□□ -0.84
HLA-C-209ENST00000495835 KRTAP2-3P0C7H8 128 aa9.79□□□□□ -0.84
HLA-C-209ENST00000495835 KRTAP2-4Q9BYR9 128 aa9.79□□□□□ -0.84
HLA-C-209ENST00000495835 SERP2Q8N6R1 65 aa9.73□□□□□ -0.85
HLA-C-209ENST00000495835 KRTAP4-8A0A0G2JLE6 195 aa9.71□□□□□ -0.86
HLA-C-209ENST00000495835 KRTAP10-12P60413 245 aa9.71□□□□□ -0.86
HLA-C-209ENST00000495835 KRTAP4-8Q9BYQ9 185 aa9.71□□□□□ -0.86
HLA-C-209ENST00000495835 LCE1AQ5T7P2 110 aa9.69□□□□□ -0.86
HLA-C-209ENST00000495835 KRTAP10-7P60409 375 aaPredicted RBP9.68□□□□□ -0.86
HLA-C-209ENST00000495835 KRTAP13-4Q3LI77 160 aa9.51□□□□□ -0.89
HLA-C-209ENST00000495835 SPRR2DP22532 72 aa9.49□□□□□ -0.89
HLA-C-209ENST00000495835 COA5Q86WW8 74 aa9.48□□□□□ -0.89
HLA-C-209ENST00000495835 KRTAP2-2Q9BYT5 123 aa9.48□□□□□ -0.89
HLA-C-209ENST00000495835 KRTAP2-1Q9BYU5 128 aa9.48□□□□□ -0.89
HLA-C-209ENST00000495835 CAMK2N1Q7Z7J9 78 aa9.43□□□□□ -0.9
HLA-C-209ENST00000495835 SEC61GP60059 68 aa9.42□□□□□ -0.9
HLA-C-209ENST00000495835 SERP1Q9Y6X1 66 aa9.4□□□□□ -0.9
HLA-C-209ENST00000495835 COX7CP15954 63 aa9.39□□□□□ -0.91
HLA-C-209ENST00000495835 H7BZZ5 65 aa9.26□□□□□ -0.93
HLA-C-209ENST00000495835 LCE3BQ5TA77 95 aa9.24□□□□□ -0.93
HLA-C-209ENST00000495835 A0A1B0GU33 70 aa9.23□□□□□ -0.93
HLA-C-209ENST00000495835 A0A0D9SG42 100 aa9.2□□□□□ -0.94
HLA-C-209ENST00000495835 SPATA8Q6RVD6 105 aa9.18□□□□□ -0.94
HLA-C-209ENST00000495835 CYSTM1Q9H1C7 97 aa9.15□□□□□ -0.94
HLA-C-209ENST00000495835 SPINT4Q6UDR6 99 aa9.11□□□□□ -0.95
HLA-C-209ENST00000495835 KRTAP19-7Q3SYF9 63 aa9.09□□□□□ -0.95
HLA-C-209ENST00000495835 KRTAP12-1P59990 96 aa9.07□□□□□ -0.96
HLA-C-209ENST00000495835 A0A1B0GU69 56 aa9.03□□□□□ -0.96
HLA-C-209ENST00000495835 MT1EP04732 61 aa9.02□□□□□ -0.97
HLA-C-209ENST00000495835 LCE5AQ5TCM9 118 aa9.02□□□□□ -0.97
HLA-C-209ENST00000495835 SMIM26A0A096LP01 95 aa9.01□□□□□ -0.97
HLA-C-209ENST00000495835 KRTAP19-3Q7Z4W3 81 aa8.98□□□□□ -0.97
HLA-C-209ENST00000495835 ANAPC13Q9BS18 74 aa8.98□□□□□ -0.97
HLA-C-209ENST00000495835 DSTQ03001 7570 aaKnown RBP8.87□□□□□ -0.99
HLA-C-209ENST00000495835 KRTAP19-5Q3LI72 72 aa8.83□□□□□ -1
HLA-C-209ENST00000495835 ATP5EP56381 51 aaPredicted RBP8.82□□□□□ -1
HLA-C-209ENST00000495835 A8MU10 97 aa8.81□□□□□ -1
HLA-C-209ENST00000495835 MT1GP13640 62 aa8.81□□□□□ -1
HLA-C-209ENST00000495835 PRR15LQ9BU68 103 aa8.79□□□□□ -1
HLA-C-209ENST00000495835 CCDC179H3BU77 68 aa8.76□□□□□ -1.01
HLA-C-209ENST00000495835 PP632Q6XCG6 107 aa8.75□□□□□ -1.01
HLA-C-209ENST00000495835 TNP1P09430 55 aa8.71□□□□□ -1.02
HLA-C-209ENST00000495835 C10orf95Q9H7T3 257 aa8.67□□□□□ -1.02
HLA-C-209ENST00000495835 LINC01558Q9Y6Z2 57 aa8.66□□□□□ -1.02
HLA-C-209ENST00000495835 MT1LQ93083 61 aa8.61□□□□□ -1.03
HLA-C-209ENST00000495835 LCE3AQ5TA76 89 aa8.6□□□□□ -1.03
HLA-C-209ENST00000495835 MT1MQ8N339 61 aa8.59□□□□□ -1.03
HLA-C-209ENST00000495835 KRTAP4-9Q9BYQ8 210 aa8.54□□□□□ -1.04
HLA-C-209ENST00000495835 TMEM258P61165 79 aa8.51□□□□□ -1.05
HLA-C-209ENST00000495835 UQCR11O14957 56 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms