RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 SPRR2BP35325 72 aa6.19□□□□□ -1.42
VARS-228ENST00000495010 SPRR2AP35326 72 aa6.19□□□□□ -1.42
VARS-228ENST00000495010 SPRR2FQ96RM1 72 aa6.19□□□□□ -1.42
VARS-228ENST00000495010 CRIPTQ9P021 101 aa6.19□□□□□ -1.42
VARS-228ENST00000495010 PRO0461Q9UI25 63 aa6.16□□□□□ -1.42
VARS-228ENST00000495010 SMCPP49901 116 aaPredicted RBP6.15□□□□□ -1.42
VARS-228ENST00000495010 KRTAP2-2Q9BYT5 123 aa6.1□□□□□ -1.43
VARS-228ENST00000495010 KRTAP2-1Q9BYU5 128 aa6.1□□□□□ -1.43
VARS-228ENST00000495010 ETDBQ3ZM63 59 aa6.09□□□□□ -1.43
VARS-228ENST00000495010 KRTAP3-3Q9BYR6 98 aa6.09□□□□□ -1.43
VARS-228ENST00000495010 PRO2289Q9P1D8 64 aa6.09□□□□□ -1.43
VARS-228ENST00000495010 KRTAP8-1Q8IUC2 63 aa6.06□□□□□ -1.44
VARS-228ENST00000495010 TP53AIP1Q9HCN2 124 aa6.05□□□□□ -1.44
VARS-228ENST00000495010 UBL5Q9BZL1 73 aa6.03□□□□□ -1.44
VARS-228ENST00000495010 J3QR89 54 aa6.02□□□□□ -1.45
VARS-228ENST00000495010 ACYP1P07311 99 aa6.01□□□□□ -1.45
VARS-228ENST00000495010 LCE1AQ5T7P2 110 aa6.01□□□□□ -1.45
VARS-228ENST00000495010 SPRR2DP22532 72 aa6□□□□□ -1.45
VARS-228ENST00000495010 A0A087WVE0 104 aa5.99□□□□□ -1.45
VARS-228ENST00000495010 A8MUN3 132 aa5.98□□□□□ -1.45
VARS-228ENST00000495010 PLAC4Q8WY50 150 aa5.98□□□□□ -1.45
VARS-228ENST00000495010 FAM240AA0A1B0GVK7 77 aa5.97□□□□□ -1.45
VARS-228ENST00000495010 NDUFC1O43677 76 aa5.96□□□□□ -1.46
VARS-228ENST00000495010 MT1XP80297 61 aa5.96□□□□□ -1.46
VARS-228ENST00000495010 CYP4F30PQ9H0H9 118 aa5.96□□□□□ -1.46
VARS-228ENST00000495010 H0YAA0 97 aa5.95□□□□□ -1.46
VARS-228ENST00000495010 K7ERU9 68 aa5.93□□□□□ -1.46
VARS-228ENST00000495010 ADM2Q7Z4H4 148 aa5.92□□□□□ -1.46
VARS-228ENST00000495010 KRTAP12-2P59991 146 aa5.9□□□□□ -1.46
VARS-228ENST00000495010 LOC101927531A0A1B0GV80 90 aa5.88□□□□□ -1.47
VARS-228ENST00000495010 ATP5EP2Q5VTU8 51 aa5.87□□□□□ -1.47
VARS-228ENST00000495010 TRAV22A0A0B4J277 110 aa5.86□□□□□ -1.47
VARS-228ENST00000495010 LINC00643Q86TS7 51 aa5.86□□□□□ -1.47
VARS-228ENST00000495010 LCE3BQ5TA77 95 aa5.85□□□□□ -1.47
VARS-228ENST00000495010 KRTAP4-8A0A0G2JLE6 195 aa5.84□□□□□ -1.47
VARS-228ENST00000495010 KRTAP4-8Q9BYQ9 185 aa5.84□□□□□ -1.47
VARS-228ENST00000495010 R4GN34 69 aa5.82□□□□□ -1.48
VARS-228ENST00000495010 HIST1H4AP62805 103 aaKnown RBP5.76□□□□□ -1.49
VARS-228ENST00000495010 M0QZ58 72 aa5.75□□□□□ -1.49
VARS-228ENST00000495010 C20orf197Q8N268 126 aa5.75□□□□□ -1.49
VARS-228ENST00000495010 ATOX1O00244 68 aa5.73□□□□□ -1.49
VARS-228ENST00000495010 H0Y9P7 68 aa5.72□□□□□ -1.49
VARS-228ENST00000495010 UQCRQO14949 82 aa5.71□□□□□ -1.5
VARS-228ENST00000495010 LINC01554Q52M75 96 aa5.71□□□□□ -1.5
VARS-228ENST00000495010 P0C880 135 aa5.69□□□□□ -1.5
VARS-228ENST00000495010 KRTAP10-7P60409 375 aaPredicted RBP5.69□□□□□ -1.5
VARS-228ENST00000495010 KRTAP10-12P60413 245 aa5.67□□□□□ -1.5
VARS-228ENST00000495010 MT-ATP8P03928 68 aa5.66□□□□□ -1.5
VARS-228ENST00000495010 SCGB1A1P11684 91 aa5.63□□□□□ -1.51
VARS-228ENST00000495010 LINC00208Q96KT6 92 aa5.6□□□□□ -1.51
VARS-228ENST00000495010 GPR98Q8WXG9 6306 aa5.6□□□□□ -1.51
VARS-228ENST00000495010 SMIM20Q8N5G0 67 aa5.58□□□□□ -1.52
VARS-228ENST00000495010 KRTAP3-2Q9BYR7 98 aa5.54□□□□□ -1.52
VARS-228ENST00000495010 MP68P56378 58 aa5.53□□□□□ -1.52
VARS-228ENST00000495010 KRTAP4-9Q9BYQ8 210 aa5.53□□□□□ -1.52
VARS-228ENST00000495010 OCR1Q9BZK8 76 aa5.53□□□□□ -1.52
VARS-228ENST00000495010 TRAV7A0A075B6U4 112 aa5.5□□□□□ -1.53
VARS-228ENST00000495010 DSTQ03001 7570 aaKnown RBP5.49□□□□□ -1.53
VARS-228ENST00000495010 H3BPC8 53 aa5.48□□□□□ -1.53
VARS-228ENST00000495010 SERP2Q8N6R1 65 aa5.45□□□□□ -1.54
VARS-228ENST00000495010 DMAC1Q96GE9 116 aa5.45□□□□□ -1.54
VARS-228ENST00000495010 LCE5AQ5TCM9 118 aa5.41□□□□□ -1.54
VARS-228ENST00000495010 ANAPC13Q9BS18 74 aa5.39□□□□□ -1.55
VARS-228ENST00000495010 COX7CP15954 63 aa5.37□□□□□ -1.55
VARS-228ENST00000495010 KRTAP19-3Q7Z4W3 81 aa5.36□□□□□ -1.55
VARS-228ENST00000495010 LCE1DQ5T752 114 aa5.35□□□□□ -1.55
VARS-228ENST00000495010 SPTSSBQ8NFR3 76 aa5.34□□□□□ -1.55
VARS-228ENST00000495010 MT1EP04732 61 aa5.32□□□□□ -1.56
VARS-228ENST00000495010 KRTAP19-7Q3SYF9 63 aa5.32□□□□□ -1.56
VARS-228ENST00000495010 CAMK2N1Q7Z7J9 78 aa5.32□□□□□ -1.56
VARS-228ENST00000495010 SNURFQ9Y675 71 aa5.31□□□□□ -1.56
VARS-228ENST00000495010 ACYP2P14621 99 aa5.3□□□□□ -1.56
VARS-228ENST00000495010 CYSTM1Q9H1C7 97 aa5.3□□□□□ -1.56
VARS-228ENST00000495010 MT4P47944 62 aa5.27□□□□□ -1.57
VARS-228ENST00000495010 LCE4AQ5TA78 99 aa5.26□□□□□ -1.57
VARS-228ENST00000495010 SPANXA2-OT1Q8N9U9 137 aa5.24□□□□□ -1.57
VARS-228ENST00000495010 CHKB-CPT1BH3BT56 60 aa5.23□□□□□ -1.57
VARS-228ENST00000495010 PP632Q6XCG6 107 aa5.21□□□□□ -1.58
VARS-228ENST00000495010 CCDC179H3BU77 68 aa5.2□□□□□ -1.58
VARS-228ENST00000495010 MT1GP13640 62 aa5.2□□□□□ -1.58
VARS-228ENST00000495010 H7BZZ5 65 aa5.18□□□□□ -1.58
VARS-228ENST00000495010 HMCN1Q96RW7 5635 aa5.14□□□□□ -1.59
VARS-228ENST00000495010 A0A0D9SG42 100 aa5.14□□□□□ -1.59
VARS-228ENST00000495010 ATP5EP56381 51 aaPredicted RBP5.14□□□□□ -1.59
VARS-228ENST00000495010 KRTAP13-4Q3LI77 160 aa5.14□□□□□ -1.59
VARS-228ENST00000495010 KRTAP19-5Q3LI72 72 aa5.13□□□□□ -1.59
VARS-228ENST00000495010 KRTAP5-10Q6L8G5 202 aa5.13□□□□□ -1.59
VARS-228ENST00000495010 PCP4P48539 62 aa5.11□□□□□ -1.59
VARS-228ENST00000495010 TMEM258P61165 79 aa5.11□□□□□ -1.59
VARS-228ENST00000495010 MT1MQ8N339 61 aa5.09□□□□□ -1.59
VARS-228ENST00000495010 AHNAK2Q8IVF2 5795 aa5.06□□□□□ -1.6
VARS-228ENST00000495010 KRTAP5-4Q6L8H1 288 aa5.04□□□□□ -1.6
VARS-228ENST00000495010 COA5Q86WW8 74 aa5.04□□□□□ -1.6
VARS-228ENST00000495010 KRTAP4-6Q9BYQ5 205 aa5.04□□□□□ -1.6
VARS-228ENST00000495010 MT1LQ93083 61 aa5.02□□□□□ -1.61
VARS-228ENST00000495010 SPINT4Q6UDR6 99 aa5□□□□□ -1.61
VARS-228ENST00000495010 KRTAP5-7Q6L8G8 165 aa4.99□□□□□ -1.61
VARS-228ENST00000495010 KRTAP4-3Q9BYR4 195 aa4.98□□□□□ -1.61
VARS-228ENST00000495010 KRTAP5-3Q6L8H2 238 aa4.94□□□□□ -1.62
VARS-228ENST00000495010 SERP1Q9Y6X1 66 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms