RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 LOC101927531A0A1B0GV80 90 aa10.02□□□□□ -0.81
COL27A1-208ENST00000494780 TRAV22A0A0B4J277 110 aa10□□□□□ -0.81
COL27A1-208ENST00000494780 MDN1Q9NU22 5596 aa9.98□□□□□ -0.81
COL27A1-208ENST00000494780 H0YAA0 97 aa9.97□□□□□ -0.81
COL27A1-208ENST00000494780 NDUFC1O43677 76 aa9.93□□□□□ -0.82
COL27A1-208ENST00000494780 GTF2H5Q6ZYL4 71 aa9.9□□□□□ -0.82
COL27A1-208ENST00000494780 F8W1H4 67 aa9.89□□□□□ -0.83
COL27A1-208ENST00000494780 ETDBQ3ZM63 59 aa9.88□□□□□ -0.83
COL27A1-208ENST00000494780 KRTAP2-3P0C7H8 128 aa9.86□□□□□ -0.83
COL27A1-208ENST00000494780 KRTAP2-4Q9BYR9 128 aa9.86□□□□□ -0.83
COL27A1-208ENST00000494780 PRO2289Q9P1D8 64 aa9.85□□□□□ -0.83
COL27A1-208ENST00000494780 A8MUN3 132 aa9.82□□□□□ -0.84
COL27A1-208ENST00000494780 UQCRQO14949 82 aa9.82□□□□□ -0.84
COL27A1-208ENST00000494780 ATOX1O00244 68 aa9.81□□□□□ -0.84
COL27A1-208ENST00000494780 ADM2Q7Z4H4 148 aa9.81□□□□□ -0.84
COL27A1-208ENST00000494780 SPRR2FQ96RM1 72 aa9.81□□□□□ -0.84
COL27A1-208ENST00000494780 H0Y9P7 68 aa9.79□□□□□ -0.84
COL27A1-208ENST00000494780 ACYP1P07311 99 aa9.79□□□□□ -0.84
COL27A1-208ENST00000494780 SPRR2EP22531 72 aa9.76□□□□□ -0.85
COL27A1-208ENST00000494780 SPRR2BP35325 72 aa9.76□□□□□ -0.85
COL27A1-208ENST00000494780 SPRR2AP35326 72 aa9.76□□□□□ -0.85
COL27A1-208ENST00000494780 MT1XP80297 61 aa9.76□□□□□ -0.85
COL27A1-208ENST00000494780 ATP5EP2Q5VTU8 51 aa9.73□□□□□ -0.85
COL27A1-208ENST00000494780 PLAC4Q8WY50 150 aa9.72□□□□□ -0.85
COL27A1-208ENST00000494780 HIST1H4AP62805 103 aaKnown RBP9.71□□□□□ -0.86
COL27A1-208ENST00000494780 KRTAP8-1Q8IUC2 63 aa9.67□□□□□ -0.86
COL27A1-208ENST00000494780 FAM240AA0A1B0GVK7 77 aa9.64□□□□□ -0.87
COL27A1-208ENST00000494780 KRTAP12-2P59991 146 aa9.63□□□□□ -0.87
COL27A1-208ENST00000494780 R4GN34 69 aa9.61□□□□□ -0.87
COL27A1-208ENST00000494780 LINC00208Q96KT6 92 aa9.6□□□□□ -0.87
COL27A1-208ENST00000494780 LCE1AQ5T7P2 110 aa9.58□□□□□ -0.88
COL27A1-208ENST00000494780 C20orf197Q8N268 126 aa9.56□□□□□ -0.88
COL27A1-208ENST00000494780 P0C880 135 aa9.53□□□□□ -0.88
COL27A1-208ENST00000494780 KRTAP2-2Q9BYT5 123 aa9.53□□□□□ -0.88
COL27A1-208ENST00000494780 KRTAP2-1Q9BYU5 128 aa9.53□□□□□ -0.88
COL27A1-208ENST00000494780 MP68P56378 58 aa9.51□□□□□ -0.89
COL27A1-208ENST00000494780 M0QZ58 72 aa9.5□□□□□ -0.89
COL27A1-208ENST00000494780 LINC00643Q86TS7 51 aa9.46□□□□□ -0.9
COL27A1-208ENST00000494780 PCP4L1A6NKN8 68 aa9.45□□□□□ -0.9
COL27A1-208ENST00000494780 OCR1Q9BZK8 76 aa9.45□□□□□ -0.9
COL27A1-208ENST00000494780 KRTAP4-8A0A0G2JLE6 195 aa9.44□□□□□ -0.9
COL27A1-208ENST00000494780 SPRR2DP22532 72 aa9.44□□□□□ -0.9
COL27A1-208ENST00000494780 KRTAP4-8Q9BYQ9 185 aa9.44□□□□□ -0.9
COL27A1-208ENST00000494780 KRTAP3-2Q9BYR7 98 aa9.39□□□□□ -0.91
COL27A1-208ENST00000494780 LINC01554Q52M75 96 aa9.38□□□□□ -0.91
COL27A1-208ENST00000494780 DMAC1Q96GE9 116 aa9.37□□□□□ -0.91
COL27A1-208ENST00000494780 H3BPC8 53 aa9.34□□□□□ -0.91
COL27A1-208ENST00000494780 KRTAP10-7P60409 375 aaPredicted RBP9.31□□□□□ -0.92
COL27A1-208ENST00000494780 KRTAP10-12P60413 245 aa9.29□□□□□ -0.92
COL27A1-208ENST00000494780 LCE3BQ5TA77 95 aa9.21□□□□□ -0.94
COL27A1-208ENST00000494780 TRAV7A0A075B6U4 112 aa9.17□□□□□ -0.94
COL27A1-208ENST00000494780 MT-ATP8P03928 68 aa9.13□□□□□ -0.95
COL27A1-208ENST00000494780 SCGB1A1P11684 91 aa9.12□□□□□ -0.95
COL27A1-208ENST00000494780 ACYP2P14621 99 aa9.07□□□□□ -0.96
COL27A1-208ENST00000494780 SPTSSBQ8NFR3 76 aa9.05□□□□□ -0.96
COL27A1-208ENST00000494780 J3QR89 54 aa8.95□□□□□ -0.98
COL27A1-208ENST00000494780 A0A1B0GV90 55 aa8.9□□□□□ -0.98
COL27A1-208ENST00000494780 CHKB-CPT1BH3BT56 60 aa8.9□□□□□ -0.98
COL27A1-208ENST00000494780 SMIM20Q8N5G0 67 aa8.79□□□□□ -1
COL27A1-208ENST00000494780 CAMK2N1Q7Z7J9 78 aa8.78□□□□□ -1
COL27A1-208ENST00000494780 KRTAP13-4Q3LI77 160 aa8.76□□□□□ -1.01
COL27A1-208ENST00000494780 LCE5AQ5TCM9 118 aa8.76□□□□□ -1.01
COL27A1-208ENST00000494780 KRTAP19-7Q3SYF9 63 aa8.74□□□□□ -1.01
COL27A1-208ENST00000494780 GPR98Q8WXG9 6306 aa8.73□□□□□ -1.01
COL27A1-208ENST00000494780 DSTQ03001 7570 aaKnown RBP8.7□□□□□ -1.02
COL27A1-208ENST00000494780 KRTAP19-3Q7Z4W3 81 aa8.69□□□□□ -1.02
COL27A1-208ENST00000494780 MT1EP04732 61 aa8.68□□□□□ -1.02
COL27A1-208ENST00000494780 KRTAP4-9Q9BYQ8 210 aa8.64□□□□□ -1.03
COL27A1-208ENST00000494780 SNURFQ9Y675 71 aa8.64□□□□□ -1.03
COL27A1-208ENST00000494780 SPANXA2-OT1Q8N9U9 137 aa8.62□□□□□ -1.03
COL27A1-208ENST00000494780 CYSTM1Q9H1C7 97 aa8.5□□□□□ -1.05
COL27A1-208ENST00000494780 A0A0D9SG42 100 aa8.47□□□□□ -1.05
COL27A1-208ENST00000494780 MT1GP13640 62 aa8.45□□□□□ -1.06
COL27A1-208ENST00000494780 K7ERU9 68 aa8.42□□□□□ -1.06
COL27A1-208ENST00000494780 KRTAP19-5Q3LI72 72 aa8.42□□□□□ -1.06
COL27A1-208ENST00000494780 LCE1DQ5T752 114 aa8.41□□□□□ -1.06
COL27A1-208ENST00000494780 SEC61GP60059 68 aa8.4□□□□□ -1.06
COL27A1-208ENST00000494780 PP632Q6XCG6 107 aa8.39□□□□□ -1.07
COL27A1-208ENST00000494780 SERP1Q9Y6X1 66 aa8.39□□□□□ -1.07
COL27A1-208ENST00000494780 COA5Q86WW8 74 aa8.38□□□□□ -1.07
COL27A1-208ENST00000494780 SPINT4Q6UDR6 99 aa8.36□□□□□ -1.07
COL27A1-208ENST00000494780 SPATA8Q6RVD6 105 aa8.35□□□□□ -1.07
COL27A1-208ENST00000494780 SERP2Q8N6R1 65 aa8.35□□□□□ -1.07
COL27A1-208ENST00000494780 LCE4AQ5TA78 99 aa8.34□□□□□ -1.07
COL27A1-208ENST00000494780 MT1MQ8N339 61 aa8.29□□□□□ -1.08
COL27A1-208ENST00000494780 A0A1B0GU33 70 aa8.28□□□□□ -1.08
COL27A1-208ENST00000494780 KRTAP12-1P59990 96 aa8.28□□□□□ -1.08
COL27A1-208ENST00000494780 MT4P47944 62 aa8.26□□□□□ -1.09
COL27A1-208ENST00000494780 MT1LQ93083 61 aa8.24□□□□□ -1.09
COL27A1-208ENST00000494780 HMCN1Q96RW7 5635 aa8.23□□□□□ -1.09
COL27A1-208ENST00000494780 KRTAP5-4Q6L8H1 288 aa8.12□□□□□ -1.11
COL27A1-208ENST00000494780 KRTAP4-3Q9BYR4 195 aa8.08□□□□□ -1.12
COL27A1-208ENST00000494780 SMIM26A0A096LP01 95 aa8.07□□□□□ -1.12
COL27A1-208ENST00000494780 C10orf95Q9H7T3 257 aa8.07□□□□□ -1.12
COL27A1-208ENST00000494780 LCE3AQ5TA76 89 aa8.06□□□□□ -1.12
COL27A1-208ENST00000494780 AHNAK2Q8IVF2 5795 aa8.06□□□□□ -1.12
COL27A1-208ENST00000494780 TNP1P09430 55 aa8□□□□□ -1.13
COL27A1-208ENST00000494780 KRTAP5-10Q6L8G5 202 aa8□□□□□ -1.13
COL27A1-208ENST00000494780 KRTAP4-6Q9BYQ5 205 aa8□□□□□ -1.13
COL27A1-208ENST00000494780 COX7CP15954 63 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms