RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 A0A0G2JQZ4 141 aa6.26□□□□□ -1.41
PDLIM1-205ENST00000493949 CHTF8P0CG12 524 aa6.25□□□□□ -1.41
PDLIM1-205ENST00000493949 C8orf87E5RJ46 101 aa6.24□□□□□ -1.41
PDLIM1-205ENST00000493949 SPACA4Q8TDM5 124 aa6.24□□□□□ -1.41
PDLIM1-205ENST00000493949 A0A087X002 238 aa6.23□□□□□ -1.41
PDLIM1-205ENST00000493949 KRTAP9-8Q9BYQ0 159 aa6.23□□□□□ -1.41
PDLIM1-205ENST00000493949 KRTAP11-1Q8IUC1 163 aa6.22□□□□□ -1.41
PDLIM1-205ENST00000493949 A6NN06 94 aa6.21□□□□□ -1.42
PDLIM1-205ENST00000493949 SPINK6Q6UWN8 80 aa6.21□□□□□ -1.42
PDLIM1-205ENST00000493949 LCA10Q71F78 164 aa6.2□□□□□ -1.42
PDLIM1-205ENST00000493949 C7orf65Q6ZTY9 151 aa6.19□□□□□ -1.42
PDLIM1-205ENST00000493949 HRES1P13985 223 aa6.18□□□□□ -1.42
PDLIM1-205ENST00000493949 ACYP2P14621 99 aa6.18□□□□□ -1.42
PDLIM1-205ENST00000493949 PCOTHQ58A44 107 aa6.18□□□□□ -1.42
PDLIM1-205ENST00000493949 IGHV6-1A0A0B4J1U7 121 aa6.17□□□□□ -1.42
PDLIM1-205ENST00000493949 IGLV9-49A0A0B4J1Y8 123 aa6.17□□□□□ -1.42
PDLIM1-205ENST00000493949 ZNF861PO60384 105 aa6.16□□□□□ -1.42
PDLIM1-205ENST00000493949 KRTAP13-3Q3SY46 172 aa6.16□□□□□ -1.42
PDLIM1-205ENST00000493949 SPTSSBQ8NFR3 76 aa6.16□□□□□ -1.42
PDLIM1-205ENST00000493949 SPAG11AQ6PDA7 123 aa6.14□□□□□ -1.43
PDLIM1-205ENST00000493949 SSBP3-AS1Q7Z2R9 100 aa6.14□□□□□ -1.43
PDLIM1-205ENST00000493949 PRR26Q8N8Z3 221 aa6.13□□□□□ -1.43
PDLIM1-205ENST00000493949 DMAC1Q96GE9 116 aa6.13□□□□□ -1.43
PDLIM1-205ENST00000493949 PSORS1C2Q9UIG4 136 aa6.1□□□□□ -1.43
PDLIM1-205ENST00000493949 RBM12B-AS1Q9P1G2 102 aa6.09□□□□□ -1.43
PDLIM1-205ENST00000493949 A8MU10 97 aa6.08□□□□□ -1.44
PDLIM1-205ENST00000493949 IGLV7-43P04211 117 aa6.05□□□□□ -1.44
PDLIM1-205ENST00000493949 SPINK7P58062 85 aa6.05□□□□□ -1.44
PDLIM1-205ENST00000493949 MUC17Q685J3 4493 aa6.04□□□□□ -1.44
PDLIM1-205ENST00000493949 IGKV2-30P06310 120 aa6.03□□□□□ -1.44
PDLIM1-205ENST00000493949 A0A1B0GU69 56 aa6.02□□□□□ -1.45
PDLIM1-205ENST00000493949 LINC00313P59037 77 aa6.02□□□□□ -1.45
PDLIM1-205ENST00000493949 SPATA8Q6RVD6 105 aa6.02□□□□□ -1.45
PDLIM1-205ENST00000493949 Q5W150 140 aa6.01□□□□□ -1.45
PDLIM1-205ENST00000493949 UQCR11O14957 56 aa5.99□□□□□ -1.45
PDLIM1-205ENST00000493949 NOTCH2NLQ7Z3S9 236 aa5.99□□□□□ -1.45
PDLIM1-205ENST00000493949 MIR22HGQ0VDD5 57 aa5.93□□□□□ -1.46
PDLIM1-205ENST00000493949 IGKV2D-30A0A075B6S6 120 aa5.92□□□□□ -1.46
PDLIM1-205ENST00000493949 KRTAP16-1A8MUX0 517 aa5.92□□□□□ -1.46
PDLIM1-205ENST00000493949 KRTAP1-4P0C5Y4 121 aa5.92□□□□□ -1.46
PDLIM1-205ENST00000493949 RPS29P62273 56 aaKnown RBP5.91□□□□□ -1.46
PDLIM1-205ENST00000493949 RETNLBQ9BQ08 111 aa5.88□□□□□ -1.47
PDLIM1-205ENST00000493949 ANAPC11Q9NYG5 84 aa5.88□□□□□ -1.47
PDLIM1-205ENST00000493949 TPRXLQ17RH7 258 aa5.86□□□□□ -1.47
PDLIM1-205ENST00000493949 SPINK1P00995 79 aa5.85□□□□□ -1.47
PDLIM1-205ENST00000493949 LINC01554Q52M75 96 aa5.84□□□□□ -1.47
PDLIM1-205ENST00000493949 KRTAP13-2Q52LG2 175 aa5.82□□□□□ -1.48
PDLIM1-205ENST00000493949 KRTAP4-1Q9BYQ7 146 aa5.76□□□□□ -1.49
PDLIM1-205ENST00000493949 TYMSOSQ8TAI1 123 aa5.73□□□□□ -1.49
PDLIM1-205ENST00000493949 PRAC1Q96KF2 57 aa5.72□□□□□ -1.49
PDLIM1-205ENST00000493949 MT1HP80294 61 aa5.69□□□□□ -1.5
PDLIM1-205ENST00000493949 C20orf166-AS1Q96NR2 134 aa5.69□□□□□ -1.5
PDLIM1-205ENST00000493949 A8MUU9 505 aa5.68□□□□□ -1.5
PDLIM1-205ENST00000493949 KRTAP19-2Q3LHN2 52 aa5.68□□□□□ -1.5
PDLIM1-205ENST00000493949 LINC00304Q8N9R0 145 aa5.68□□□□□ -1.5
PDLIM1-205ENST00000493949 KRTAP10-6P60371 365 aaPredicted RBP5.67□□□□□ -1.5
PDLIM1-205ENST00000493949 ADM2Q7Z4H4 148 aa5.66□□□□□ -1.5
PDLIM1-205ENST00000493949 K7ERS5 55 aa5.65□□□□□ -1.5
PDLIM1-205ENST00000493949 SEC61BP60468 96 aaKnown RBP5.65□□□□□ -1.5
PDLIM1-205ENST00000493949 CSAG1Q6PB30 78 aa5.64□□□□□ -1.51
PDLIM1-205ENST00000493949 A0A1B0GU33 70 aa5.63□□□□□ -1.51
PDLIM1-205ENST00000493949 H1FX-AS1Q4G0G2 97 aa5.62□□□□□ -1.51
PDLIM1-205ENST00000493949 KRTAP3-1Q9BYR8 98 aa5.62□□□□□ -1.51
PDLIM1-205ENST00000493949 SSPOA2VEC9 5147 aa5.61□□□□□ -1.51
PDLIM1-205ENST00000493949 H0YAA0 97 aa5.61□□□□□ -1.51
PDLIM1-205ENST00000493949 KRTAP25-1Q3LHN0 102 aa5.59□□□□□ -1.51
PDLIM1-205ENST00000493949 FCGBPQ9Y6R7 5405 aaPredicted RBP5.59□□□□□ -1.52
PDLIM1-205ENST00000493949 FLGP20930 4061 aaPredicted RBP5.58□□□□□ -1.52
PDLIM1-205ENST00000493949 USH2AO75445 5202 aa5.57□□□□□ -1.52
PDLIM1-205ENST00000493949 COX6B2Q6YFQ2 88 aa5.55□□□□□ -1.52
PDLIM1-205ENST00000493949 SYNE2Q8WXH0 6885 aaKnown RBP5.5□□□□□ -1.53
PDLIM1-205ENST00000493949 M0R2T5 61 aa5.48□□□□□ -1.53
PDLIM1-205ENST00000493949 MACF1Q9UPN3 7388 aaKnown RBP5.45□□□□□ -1.54
PDLIM1-205ENST00000493949 ROMO1P60602 79 aa5.45□□□□□ -1.54
PDLIM1-205ENST00000493949 RPL37P61927 97 aaKnown RBP5.43□□□□□ -1.54
PDLIM1-205ENST00000493949 C9orf92A6NGG3 77 aa5.41□□□□□ -1.54
PDLIM1-205ENST00000493949 KRTAP23-1A1A580 65 aa5.34□□□□□ -1.55
PDLIM1-205ENST00000493949 KRTAP6-3Q3LI67 103 aa5.32□□□□□ -1.56
PDLIM1-205ENST00000493949 S4R3F8 94 aa5.32□□□□□ -1.56
PDLIM1-205ENST00000493949 M0QZ58 72 aa5.23□□□□□ -1.57
PDLIM1-205ENST00000493949 CRIPTQ9P021 101 aa5.23□□□□□ -1.57
PDLIM1-205ENST00000493949 NEBP20929 6669 aa5.22□□□□□ -1.57
PDLIM1-205ENST00000493949 KRTAP19-6Q3LI70 58 aa5.2□□□□□ -1.58
PDLIM1-205ENST00000493949 KRTAP13-4Q3LI77 160 aa5.19□□□□□ -1.58
PDLIM1-205ENST00000493949 MT2AP02795 61 aa5.17□□□□□ -1.58
PDLIM1-205ENST00000493949 SPINT4Q6UDR6 99 aa5.17□□□□□ -1.58
PDLIM1-205ENST00000493949 KRTAP20-1Q3LI63 56 aa5.16□□□□□ -1.58
PDLIM1-205ENST00000493949 P0C880 135 aa5.15□□□□□ -1.59
PDLIM1-205ENST00000493949 A0A0D9SG42 100 aa5.13□□□□□ -1.59
PDLIM1-205ENST00000493949 MT1FP04733 61 aa5.12□□□□□ -1.59
PDLIM1-205ENST00000493949 KRTAP15-1Q3LI76 137 aa5.12□□□□□ -1.59
PDLIM1-205ENST00000493949 KRTAP12-1P59990 96 aa5.11□□□□□ -1.59
PDLIM1-205ENST00000493949 MUC12Q9UKN1 5478 aa5.09□□□□□ -1.6
PDLIM1-205ENST00000493949 KRTAP12-2P59991 146 aa5.08□□□□□ -1.6
PDLIM1-205ENST00000493949 KRTAP10-10P60014 251 aa5.04□□□□□ -1.6
PDLIM1-205ENST00000493949 C10orf95Q9H7T3 257 aa4.99□□□□□ -1.61
PDLIM1-205ENST00000493949 NDUFAF8A1L188 74 aa4.94□□□□□ -1.62
PDLIM1-205ENST00000493949 PP632Q6XCG6 107 aa4.94□□□□□ -1.62
PDLIM1-205ENST00000493949 R4GN34 69 aa4.92□□□□□ -1.62
PDLIM1-205ENST00000493949 MDN1Q9NU22 5596 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms