RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 MUC12Q9UKN1 5478 aa10.42□□□□□ -0.74
RHBDD3-206ENST00000493894 ACYP1P07311 99 aa10.4□□□□□ -0.74
RHBDD3-206ENST00000493894 PCP4L1A6NKN8 68 aa10.39□□□□□ -0.75
RHBDD3-206ENST00000493894 ATP5EP2Q5VTU8 51 aa10.39□□□□□ -0.75
RHBDD3-206ENST00000493894 IMUPQ9GZP8 106 aa10.38□□□□□ -0.75
RHBDD3-206ENST00000493894 ATOX1O00244 68 aa10.35□□□□□ -0.75
RHBDD3-206ENST00000493894 UQCRQO14949 82 aa10.35□□□□□ -0.75
RHBDD3-206ENST00000493894 HIST1H4AP62805 103 aaKnown RBP10.35□□□□□ -0.75
RHBDD3-206ENST00000493894 H0Y9P7 68 aa10.34□□□□□ -0.75
RHBDD3-206ENST00000493894 FAM240AA0A1B0GVK7 77 aa10.33□□□□□ -0.76
RHBDD3-206ENST00000493894 NDUFC1O43677 76 aa10.32□□□□□ -0.76
RHBDD3-206ENST00000493894 H0YAA0 97 aa10.29□□□□□ -0.76
RHBDD3-206ENST00000493894 A8MUN3 132 aa10.23□□□□□ -0.77
RHBDD3-206ENST00000493894 KRTAP5-9P26371 169 aa10.22□□□□□ -0.77
RHBDD3-206ENST00000493894 ADM2Q7Z4H4 148 aa10.16□□□□□ -0.78
RHBDD3-206ENST00000493894 KMT2DO14686 5537 aa10.16□□□□□ -0.78
RHBDD3-206ENST00000493894 MDN1Q9NU22 5596 aa10.14□□□□□ -0.79
RHBDD3-206ENST00000493894 LINC00208Q96KT6 92 aa10.14□□□□□ -0.79
RHBDD3-206ENST00000493894 LINC00643Q86TS7 51 aa10.12□□□□□ -0.79
RHBDD3-206ENST00000493894 KRTAP20-1Q3LI63 56 aa10.1□□□□□ -0.79
RHBDD3-206ENST00000493894 MP68P56378 58 aa10.08□□□□□ -0.8
RHBDD3-206ENST00000493894 PRO2289Q9P1D8 64 aa10.05□□□□□ -0.8
RHBDD3-206ENST00000493894 OCR1Q9BZK8 76 aa10.03□□□□□ -0.8
RHBDD3-206ENST00000493894 PLAC4Q8WY50 150 aa9.97□□□□□ -0.81
RHBDD3-206ENST00000493894 MT1XP80297 61 aa9.95□□□□□ -0.82
RHBDD3-206ENST00000493894 R4GN34 69 aa9.95□□□□□ -0.82
RHBDD3-206ENST00000493894 C20orf197Q8N268 126 aa9.93□□□□□ -0.82
RHBDD3-206ENST00000493894 H3BPC8 53 aa9.89□□□□□ -0.83
RHBDD3-206ENST00000493894 P0C880 135 aa9.89□□□□□ -0.83
RHBDD3-206ENST00000493894 SPRR2FQ96RM1 72 aa9.88□□□□□ -0.83
RHBDD3-206ENST00000493894 M0QZ58 72 aa9.86□□□□□ -0.83
RHBDD3-206ENST00000493894 DMAC1Q96GE9 116 aa9.86□□□□□ -0.83
RHBDD3-206ENST00000493894 SPRR2EP22531 72 aa9.79□□□□□ -0.84
RHBDD3-206ENST00000493894 SPRR2BP35325 72 aa9.79□□□□□ -0.84
RHBDD3-206ENST00000493894 SPRR2AP35326 72 aa9.79□□□□□ -0.84
RHBDD3-206ENST00000493894 KRTAP8-1Q8IUC2 63 aa9.79□□□□□ -0.84
RHBDD3-206ENST00000493894 A0A1B0GV90 55 aa9.78□□□□□ -0.84
RHBDD3-206ENST00000493894 SCGB1A1P11684 91 aa9.77□□□□□ -0.85
RHBDD3-206ENST00000493894 KRTAP12-2P59991 146 aa9.77□□□□□ -0.85
RHBDD3-206ENST00000493894 KRTAP2-3P0C7H8 128 aa9.76□□□□□ -0.85
RHBDD3-206ENST00000493894 KRTAP2-4Q9BYR9 128 aa9.76□□□□□ -0.85
RHBDD3-206ENST00000493894 J3QR89 54 aa9.74□□□□□ -0.85
RHBDD3-206ENST00000493894 LINC01554Q52M75 96 aa9.73□□□□□ -0.85
RHBDD3-206ENST00000493894 KRTAP3-2Q9BYR7 98 aa9.73□□□□□ -0.85
RHBDD3-206ENST00000493894 TRAV7A0A075B6U4 112 aa9.65□□□□□ -0.86
RHBDD3-206ENST00000493894 LCE1AQ5T7P2 110 aa9.6□□□□□ -0.87
RHBDD3-206ENST00000493894 KRTAP4-8A0A0G2JLE6 195 aa9.57□□□□□ -0.88
RHBDD3-206ENST00000493894 ACYP2P14621 99 aa9.57□□□□□ -0.88
RHBDD3-206ENST00000493894 KRTAP4-8Q9BYQ9 185 aa9.57□□□□□ -0.88
RHBDD3-206ENST00000493894 SPTSSBQ8NFR3 76 aa9.54□□□□□ -0.88
RHBDD3-206ENST00000493894 MT-ATP8P03928 68 aa9.51□□□□□ -0.89
RHBDD3-206ENST00000493894 KRTAP10-7P60409 375 aaPredicted RBP9.5□□□□□ -0.89
RHBDD3-206ENST00000493894 SPRR2DP22532 72 aa9.47□□□□□ -0.89
RHBDD3-206ENST00000493894 KRTAP10-12P60413 245 aa9.45□□□□□ -0.9
RHBDD3-206ENST00000493894 SMIM20Q8N5G0 67 aa9.45□□□□□ -0.9
RHBDD3-206ENST00000493894 KRTAP2-2Q9BYT5 123 aa9.44□□□□□ -0.9
RHBDD3-206ENST00000493894 KRTAP2-1Q9BYU5 128 aa9.44□□□□□ -0.9
RHBDD3-206ENST00000493894 CHKB-CPT1BH3BT56 60 aa9.43□□□□□ -0.9
RHBDD3-206ENST00000493894 SNURFQ9Y675 71 aa9.27□□□□□ -0.93
RHBDD3-206ENST00000493894 K7ERU9 68 aa9.25□□□□□ -0.93
RHBDD3-206ENST00000493894 LCE3BQ5TA77 95 aa9.21□□□□□ -0.94
RHBDD3-206ENST00000493894 SPANXA2-OT1Q8N9U9 137 aa9.19□□□□□ -0.94
RHBDD3-206ENST00000493894 KRTAP13-4Q3LI77 160 aa9.14□□□□□ -0.95
RHBDD3-206ENST00000493894 CAMK2N1Q7Z7J9 78 aa9.13□□□□□ -0.95
RHBDD3-206ENST00000493894 SERP2Q8N6R1 65 aa9.03□□□□□ -0.96
RHBDD3-206ENST00000493894 COA5Q86WW8 74 aa8.95□□□□□ -0.98
RHBDD3-206ENST00000493894 SEC61GP60059 68 aa8.91□□□□□ -0.98
RHBDD3-206ENST00000493894 DSTQ03001 7570 aaKnown RBP8.9□□□□□ -0.98
RHBDD3-206ENST00000493894 KRTAP19-7Q3SYF9 63 aa8.89□□□□□ -0.99
RHBDD3-206ENST00000493894 SERP1Q9Y6X1 66 aa8.89□□□□□ -0.99
RHBDD3-206ENST00000493894 A0A0D9SG42 100 aa8.87□□□□□ -0.99
RHBDD3-206ENST00000493894 LCE5AQ5TCM9 118 aa8.85□□□□□ -0.99
RHBDD3-206ENST00000493894 MT1EP04732 61 aa8.84□□□□□ -0.99
RHBDD3-206ENST00000493894 KRTAP19-3Q7Z4W3 81 aa8.82□□□□□ -1
RHBDD3-206ENST00000493894 SPATA8Q6RVD6 105 aa8.8□□□□□ -1
RHBDD3-206ENST00000493894 SPINT4Q6UDR6 99 aa8.78□□□□□ -1
RHBDD3-206ENST00000493894 A0A1B0GU33 70 aa8.74□□□□□ -1.01
RHBDD3-206ENST00000493894 GPR98Q8WXG9 6306 aa8.69□□□□□ -1.02
RHBDD3-206ENST00000493894 COX7CP15954 63 aa8.69□□□□□ -1.02
RHBDD3-206ENST00000493894 KRTAP12-1P59990 96 aa8.67□□□□□ -1.02
RHBDD3-206ENST00000493894 KRTAP19-5Q3LI72 72 aa8.63□□□□□ -1.03
RHBDD3-206ENST00000493894 CYSTM1Q9H1C7 97 aa8.62□□□□□ -1.03
RHBDD3-206ENST00000493894 H7BZZ5 65 aa8.61□□□□□ -1.03
RHBDD3-206ENST00000493894 KRTAP4-9Q9BYQ8 210 aa8.59□□□□□ -1.03
RHBDD3-206ENST00000493894 MT1GP13640 62 aa8.58□□□□□ -1.04
RHBDD3-206ENST00000493894 PP632Q6XCG6 107 aa8.55□□□□□ -1.04
RHBDD3-206ENST00000493894 SMIM26A0A096LP01 95 aa8.52□□□□□ -1.05
RHBDD3-206ENST00000493894 A0A1B0GU69 56 aa8.52□□□□□ -1.05
RHBDD3-206ENST00000493894 MT1MQ8N339 61 aa8.43□□□□□ -1.06
RHBDD3-206ENST00000493894 A8MU10 97 aa8.42□□□□□ -1.06
RHBDD3-206ENST00000493894 MT1LQ93083 61 aa8.41□□□□□ -1.06
RHBDD3-206ENST00000493894 LCE1DQ5T752 114 aa8.4□□□□□ -1.06
RHBDD3-206ENST00000493894 LCE3AQ5TA76 89 aa8.35□□□□□ -1.07
RHBDD3-206ENST00000493894 LCE4AQ5TA78 99 aa8.35□□□□□ -1.07
RHBDD3-206ENST00000493894 TNP1P09430 55 aa8.34□□□□□ -1.07
RHBDD3-206ENST00000493894 C10orf95Q9H7T3 257 aa8.34□□□□□ -1.07
RHBDD3-206ENST00000493894 HMCN1Q96RW7 5635 aa8.32□□□□□ -1.08
RHBDD3-206ENST00000493894 MT4P47944 62 aa8.29□□□□□ -1.08
RHBDD3-206ENST00000493894 ANAPC13Q9BS18 74 aa8.26□□□□□ -1.09
RHBDD3-206ENST00000493894 PRR15LQ9BU68 103 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms