RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 IGKV2D-30A0A075B6S6 120 aa7.43□□□□□ -1.22
PDZRN3-210ENST00000492909 LCA10Q71F78 164 aa7.43□□□□□ -1.22
PDZRN3-210ENST00000492909 SEC61BP60468 96 aaKnown RBP7.42□□□□□ -1.22
PDZRN3-210ENST00000492909 C7orf65Q6ZTY9 151 aa7.41□□□□□ -1.22
PDZRN3-210ENST00000492909 CDC42SE1Q9NRR8 79 aa7.41□□□□□ -1.22
PDZRN3-210ENST00000492909 SPINK7P58062 85 aa7.38□□□□□ -1.23
PDZRN3-210ENST00000492909 RNF213Q63HN8 5207 aa7.36□□□□□ -1.23
PDZRN3-210ENST00000492909 PMAIP1Q13794 54 aa7.35□□□□□ -1.23
PDZRN3-210ENST00000492909 SPTSSBQ8NFR3 76 aa7.33□□□□□ -1.24
PDZRN3-210ENST00000492909 H3BS24 57 aa7.31□□□□□ -1.24
PDZRN3-210ENST00000492909 MUC17Q685J3 4493 aa7.28□□□□□ -1.24
PDZRN3-210ENST00000492909 A0A1B0GU69 56 aa7.27□□□□□ -1.25
PDZRN3-210ENST00000492909 A6NN06 94 aa7.26□□□□□ -1.25
PDZRN3-210ENST00000492909 MUC2Q02817 5179 aa7.26□□□□□ -1.25
PDZRN3-210ENST00000492909 KRTAP4-1Q9BYQ7 146 aa7.23□□□□□ -1.25
PDZRN3-210ENST00000492909 KTN1-AS1Q86SY8 53 aa7.2□□□□□ -1.26
PDZRN3-210ENST00000492909 COX6B2Q6YFQ2 88 aa7.18□□□□□ -1.26
PDZRN3-210ENST00000492909 SPATA8Q6RVD6 105 aa7.17□□□□□ -1.26
PDZRN3-210ENST00000492909 RBM12B-AS1Q9P1G2 102 aa7.16□□□□□ -1.26
PDZRN3-210ENST00000492909 UQCR11O14957 56 aa7.13□□□□□ -1.27
PDZRN3-210ENST00000492909 KRTAP3-1Q9BYR8 98 aa7.13□□□□□ -1.27
PDZRN3-210ENST00000492909 MIR22HGQ0VDD5 57 aa7.11□□□□□ -1.27
PDZRN3-210ENST00000492909 A0A0A0MQY5 61 aa7.05□□□□□ -1.28
PDZRN3-210ENST00000492909 H1FX-AS1Q4G0G2 97 aa7.04□□□□□ -1.28
PDZRN3-210ENST00000492909 FAT4Q6V0I7 4981 aa7.02□□□□□ -1.29
PDZRN3-210ENST00000492909 KRTAP19-2Q3LHN2 52 aa7□□□□□ -1.29
PDZRN3-210ENST00000492909 S4R3F8 94 aa6.96□□□□□ -1.3
PDZRN3-210ENST00000492909 LCE2CQ5TA81 110 aa6.94□□□□□ -1.3
PDZRN3-210ENST00000492909 A0A1B0GU33 70 aa6.9□□□□□ -1.31
PDZRN3-210ENST00000492909 H0YAA0 97 aa6.9□□□□□ -1.31
PDZRN3-210ENST00000492909 LCE2AQ5TA79 106 aaPredicted RBP6.89□□□□□ -1.31
PDZRN3-210ENST00000492909 KRTAP3-3Q9BYR6 98 aa6.89□□□□□ -1.31
PDZRN3-210ENST00000492909 PRAC1Q96KF2 57 aa6.87□□□□□ -1.31
PDZRN3-210ENST00000492909 ADM2Q7Z4H4 148 aa6.86□□□□□ -1.31
PDZRN3-210ENST00000492909 CSAG1Q6PB30 78 aa6.83□□□□□ -1.32
PDZRN3-210ENST00000492909 MT1HP80294 61 aa6.82□□□□□ -1.32
PDZRN3-210ENST00000492909 FLGP20930 4061 aaPredicted RBP6.8□□□□□ -1.32
PDZRN3-210ENST00000492909 M0R2T5 61 aa6.73□□□□□ -1.33
PDZRN3-210ENST00000492909 KRTAP10-6P60371 365 aaPredicted RBP6.71□□□□□ -1.34
PDZRN3-210ENST00000492909 KRTAP3-2Q9BYR7 98 aa6.68□□□□□ -1.34
PDZRN3-210ENST00000492909 K7ERS5 55 aa6.67□□□□□ -1.34
PDZRN3-210ENST00000492909 LINC01554Q52M75 96 aa6.65□□□□□ -1.34
PDZRN3-210ENST00000492909 LORP23490 312 aaPredicted RBP6.62□□□□□ -1.35
PDZRN3-210ENST00000492909 KRTAP13-4Q3LI77 160 aa6.61□□□□□ -1.35
PDZRN3-210ENST00000492909 P0C880 135 aa6.57□□□□□ -1.36
PDZRN3-210ENST00000492909 KRTAP25-1Q3LHN0 102 aa6.56□□□□□ -1.36
PDZRN3-210ENST00000492909 A0A0D9SG42 100 aa6.52□□□□□ -1.37
PDZRN3-210ENST00000492909 ROMO1P60602 79 aa6.51□□□□□ -1.37
PDZRN3-210ENST00000492909 KRTAP9-8Q9BYQ0 159 aa6.51□□□□□ -1.37
PDZRN3-210ENST00000492909 MT2AP02795 61 aa6.48□□□□□ -1.37
PDZRN3-210ENST00000492909 KRTAP9-2Q9BYQ4 174 aa6.48□□□□□ -1.37
PDZRN3-210ENST00000492909 KRTAP10-10P60014 251 aa6.44□□□□□ -1.38
PDZRN3-210ENST00000492909 MT1FP04733 61 aa6.44□□□□□ -1.38
PDZRN3-210ENST00000492909 CRIPTQ9P021 101 aa6.42□□□□□ -1.38
PDZRN3-210ENST00000492909 R4GN34 69 aa6.42□□□□□ -1.38
PDZRN3-210ENST00000492909 M0QZ58 72 aa6.41□□□□□ -1.38
PDZRN3-210ENST00000492909 LCE2DQ5TA82 110 aaPredicted RBP6.41□□□□□ -1.38
PDZRN3-210ENST00000492909 KRTAP12-2P59991 146 aa6.39□□□□□ -1.39
PDZRN3-210ENST00000492909 KRTAP12-1P59990 96 aa6.37□□□□□ -1.39
PDZRN3-210ENST00000492909 SPINT4Q6UDR6 99 aa6.33□□□□□ -1.4
PDZRN3-210ENST00000492909 SPRR2GQ9BYE4 73 aa6.3□□□□□ -1.4
PDZRN3-210ENST00000492909 KRTAP19-1Q8IUB9 90 aa6.29□□□□□ -1.4
PDZRN3-210ENST00000492909 KRTAP9-3Q9BYQ3 159 aa6.29□□□□□ -1.4
PDZRN3-210ENST00000492909 FSIP2Q5CZC0 6907 aa6.26□□□□□ -1.41
PDZRN3-210ENST00000492909 LCE2BO14633 110 aa6.22□□□□□ -1.41
PDZRN3-210ENST00000492909 C10orf95Q9H7T3 257 aa6.21□□□□□ -1.41
PDZRN3-210ENST00000492909 USH2AO75445 5202 aa6.18□□□□□ -1.42
PDZRN3-210ENST00000492909 CRCT1Q9UGL9 99 aa6.16□□□□□ -1.42
PDZRN3-210ENST00000492909 KRTAP9-6A0A140TA67 174 aa6.15□□□□□ -1.43
PDZRN3-210ENST00000492909 KRTAP19-8Q3LI54 63 aa6.15□□□□□ -1.43
PDZRN3-210ENST00000492909 PLAC4Q8WY50 150 aa6.08□□□□□ -1.44
PDZRN3-210ENST00000492909 MT1BP07438 61 aa6.07□□□□□ -1.44
PDZRN3-210ENST00000492909 SSPOA2VEC9 5147 aa6.06□□□□□ -1.44
PDZRN3-210ENST00000492909 CAMK2N1Q7Z7J9 78 aa6.01□□□□□ -1.45
PDZRN3-210ENST00000492909 KRTAP15-1Q3LI76 137 aa5.96□□□□□ -1.46
PDZRN3-210ENST00000492909 LUZP6Q538Z0 58 aa5.93□□□□□ -1.46
PDZRN3-210ENST00000492909 KRTAP19-6Q3LI70 58 aa5.9□□□□□ -1.46
PDZRN3-210ENST00000492909 FCGBPQ9Y6R7 5405 aaPredicted RBP5.89□□□□□ -1.47
PDZRN3-210ENST00000492909 MT1XP80297 61 aa5.85□□□□□ -1.47
PDZRN3-210ENST00000492909 KRTAP10-5P60370 271 aa5.83□□□□□ -1.48
PDZRN3-210ENST00000492909 PRO2289Q9P1D8 64 aa5.83□□□□□ -1.48
PDZRN3-210ENST00000492909 PP632Q6XCG6 107 aa5.81□□□□□ -1.48
PDZRN3-210ENST00000492909 KRTAP23-1A1A580 65 aa5.76□□□□□ -1.49
PDZRN3-210ENST00000492909 NDUFAF8A1L188 74 aa5.73□□□□□ -1.49
PDZRN3-210ENST00000492909 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.72□□□□□ -1.49
PDZRN3-210ENST00000492909 TNP1P09430 55 aa5.7□□□□□ -1.5
PDZRN3-210ENST00000492909 MACF1Q9UPN3 7388 aaKnown RBP5.64□□□□□ -1.51
PDZRN3-210ENST00000492909 KRTAP10-7P60409 375 aaPredicted RBP5.6□□□□□ -1.51
PDZRN3-210ENST00000492909 KRTAP9-7A8MTY7 169 aa5.56□□□□□ -1.52
PDZRN3-210ENST00000492909 KRTAP10-12P60413 245 aa5.55□□□□□ -1.52
PDZRN3-210ENST00000492909 SYNE2Q8WXH0 6885 aaKnown RBP5.52□□□□□ -1.53
PDZRN3-210ENST00000492909 LCE3AQ5TA76 89 aa5.45□□□□□ -1.54
PDZRN3-210ENST00000492909 KMT2DO14686 5537 aa5.42□□□□□ -1.54
PDZRN3-210ENST00000492909 KRTAP4-8A0A0G2JLE6 195 aa5.42□□□□□ -1.54
PDZRN3-210ENST00000492909 KRTAP4-8Q9BYQ9 185 aa5.42□□□□□ -1.54
PDZRN3-210ENST00000492909 KRTAP6-3Q3LI67 103 aa5.41□□□□□ -1.54
PDZRN3-210ENST00000492909 SPRR5A0A1B0GTR4 108 aa5.39□□□□□ -1.55
PDZRN3-210ENST00000492909 KRTAP8-1Q8IUC2 63 aa5.34□□□□□ -1.56
PDZRN3-210ENST00000492909 KRTAP5-9P26371 169 aa5.29□□□□□ -1.56
PDZRN3-210ENST00000492909 KRTAP19-5Q3LI72 72 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms