RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 Q8N9L7 120 aa4.74□□□□□ -1.65
SND1-215ENST00000492772 LOC105371267A0A1B0GV96 52 aa4.73□□□□□ -1.65
SND1-215ENST00000492772 KRTAP2-2Q9BYT5 123 aa4.73□□□□□ -1.65
SND1-215ENST00000492772 KRTAP2-1Q9BYU5 128 aa4.73□□□□□ -1.65
SND1-215ENST00000492772 BATFQ16520 125 aa4.72□□□□□ -1.65
SND1-215ENST00000492772 PRO2289Q9P1D8 64 aa4.7□□□□□ -1.66
SND1-215ENST00000492772 LCE1AQ5T7P2 110 aa4.67□□□□□ -1.66
SND1-215ENST00000492772 KRTAP8-1Q8IUC2 63 aa4.67□□□□□ -1.66
SND1-215ENST00000492772 PRO0461Q9UI25 63 aa4.67□□□□□ -1.66
SND1-215ENST00000492772 SPCS1Q9Y6A9 102 aa4.66□□□□□ -1.66
SND1-215ENST00000492772 SPRR2DP22532 72 aa4.64□□□□□ -1.67
SND1-215ENST00000492772 TP53AIP1Q9HCN2 124 aa4.63□□□□□ -1.67
SND1-215ENST00000492772 PCP4L1A6NKN8 68 aa4.62□□□□□ -1.67
SND1-215ENST00000492772 MT1XP80297 61 aa4.62□□□□□ -1.67
SND1-215ENST00000492772 H0YAA0 97 aa4.61□□□□□ -1.67
SND1-215ENST00000492772 A8MUN3 132 aa4.6□□□□□ -1.67
SND1-215ENST00000492772 KRTAP12-2P59991 146 aa4.6□□□□□ -1.67
SND1-215ENST00000492772 COL5A1-AS1Q5SY13 56 aa4.6□□□□□ -1.67
SND1-215ENST00000492772 UBL5Q9BZL1 73 aa4.6□□□□□ -1.67
SND1-215ENST00000492772 K7EP34 96 aa4.59□□□□□ -1.67
SND1-215ENST00000492772 A0A087WVE0 104 aa4.58□□□□□ -1.68
SND1-215ENST00000492772 PLAC4Q8WY50 150 aa4.57□□□□□ -1.68
SND1-215ENST00000492772 CYP4F30PQ9H0H9 118 aa4.56□□□□□ -1.68
SND1-215ENST00000492772 NDUFC1O43677 76 aa4.55□□□□□ -1.68
SND1-215ENST00000492772 GPR98Q8WXG9 6306 aa4.55□□□□□ -1.68
SND1-215ENST00000492772 LCE3BQ5TA77 95 aa4.53□□□□□ -1.68
SND1-215ENST00000492772 SEC61GP60059 68 aa4.52□□□□□ -1.69
SND1-215ENST00000492772 ADM2Q7Z4H4 148 aa4.52□□□□□ -1.69
SND1-215ENST00000492772 LOC101927531A0A1B0GV80 90 aa4.51□□□□□ -1.69
SND1-215ENST00000492772 F8W1H4 67 aa4.51□□□□□ -1.69
SND1-215ENST00000492772 TRAV22A0A0B4J277 110 aa4.49□□□□□ -1.69
SND1-215ENST00000492772 KRTAP4-8A0A0G2JLE6 195 aa4.49□□□□□ -1.69
SND1-215ENST00000492772 GTF2H5Q6ZYL4 71 aa4.49□□□□□ -1.69
SND1-215ENST00000492772 KRTAP4-8Q9BYQ9 185 aa4.49□□□□□ -1.69
SND1-215ENST00000492772 A0A0A0MQY5 61 aa4.48□□□□□ -1.69
SND1-215ENST00000492772 ETDBQ3ZM63 59 aa4.48□□□□□ -1.69
SND1-215ENST00000492772 R4GN34 69 aa4.46□□□□□ -1.7
SND1-215ENST00000492772 ACYP1P07311 99 aa4.44□□□□□ -1.7
SND1-215ENST00000492772 FAM240AA0A1B0GVK7 77 aa4.42□□□□□ -1.7
SND1-215ENST00000492772 C20orf197Q8N268 126 aa4.42□□□□□ -1.7
SND1-215ENST00000492772 M0QZ58 72 aa4.4□□□□□ -1.71
SND1-215ENST00000492772 ATP5EP2Q5VTU8 51 aa4.4□□□□□ -1.71
SND1-215ENST00000492772 ATOX1O00244 68 aa4.39□□□□□ -1.71
SND1-215ENST00000492772 KRTAP10-7P60409 375 aaPredicted RBP4.39□□□□□ -1.71
SND1-215ENST00000492772 KRTAP10-12P60413 245 aa4.39□□□□□ -1.71
SND1-215ENST00000492772 UQCRQO14949 82 aa4.37□□□□□ -1.71
SND1-215ENST00000492772 H0Y9P7 68 aa4.36□□□□□ -1.71
SND1-215ENST00000492772 P0C880 135 aa4.36□□□□□ -1.71
SND1-215ENST00000492772 DSTQ03001 7570 aaKnown RBP4.36□□□□□ -1.71
SND1-215ENST00000492772 LINC01554Q52M75 96 aa4.34□□□□□ -1.71
SND1-215ENST00000492772 HIST1H4AP62805 103 aaKnown RBP4.3□□□□□ -1.72
SND1-215ENST00000492772 LINC00643Q86TS7 51 aa4.3□□□□□ -1.72
SND1-215ENST00000492772 OCR1Q9BZK8 76 aa4.28□□□□□ -1.72
SND1-215ENST00000492772 KRTAP4-9Q9BYQ8 210 aa4.26□□□□□ -1.73
SND1-215ENST00000492772 LINC00208Q96KT6 92 aa4.25□□□□□ -1.73
SND1-215ENST00000492772 V9GYY9 64 aa4.23□□□□□ -1.73
SND1-215ENST00000492772 MT-ATP8P03928 68 aa4.21□□□□□ -1.74
SND1-215ENST00000492772 MP68P56378 58 aa4.21□□□□□ -1.74
SND1-215ENST00000492772 H3BPC8 53 aa4.2□□□□□ -1.74
SND1-215ENST00000492772 LCE5AQ5TCM9 118 aa4.2□□□□□ -1.74
SND1-215ENST00000492772 DMAC1Q96GE9 116 aa4.19□□□□□ -1.74
SND1-215ENST00000492772 A0A1B0GV90 55 aa4.15□□□□□ -1.75
SND1-215ENST00000492772 LCE1DQ5T752 114 aa4.15□□□□□ -1.75
SND1-215ENST00000492772 KRTAP19-3Q7Z4W3 81 aa4.15□□□□□ -1.75
SND1-215ENST00000492772 HMCN1Q96RW7 5635 aa4.14□□□□□ -1.75
SND1-215ENST00000492772 KRTAP19-7Q3SYF9 63 aa4.13□□□□□ -1.75
SND1-215ENST00000492772 MT1EP04732 61 aa4.12□□□□□ -1.75
SND1-215ENST00000492772 AHNAK2Q8IVF2 5795 aa4.12□□□□□ -1.75
SND1-215ENST00000492772 TRAV7A0A075B6U4 112 aa4.1□□□□□ -1.75
SND1-215ENST00000492772 J3QR89 54 aa4.09□□□□□ -1.75
SND1-215ENST00000492772 LCE4AQ5TA78 99 aa4.09□□□□□ -1.75
SND1-215ENST00000492772 CYSTM1Q9H1C7 97 aa4.09□□□□□ -1.75
SND1-215ENST00000492772 KRTAP23-1A1A580 65 aa4.08□□□□□ -1.76
SND1-215ENST00000492772 SPTSSBQ8NFR3 76 aa4.07□□□□□ -1.76
SND1-215ENST00000492772 MT4P47944 62 aa4.06□□□□□ -1.76
SND1-215ENST00000492772 CAMK2N1Q7Z7J9 78 aa4.05□□□□□ -1.76
SND1-215ENST00000492772 SCGB1A1P11684 91 aa4.04□□□□□ -1.76
SND1-215ENST00000492772 MT1GP13640 62 aa4.02□□□□□ -1.77
SND1-215ENST00000492772 ACYP2P14621 99 aa4.02□□□□□ -1.77
SND1-215ENST00000492772 KRTAP19-4Q3LI73 84 aa4.02□□□□□ -1.77
SND1-215ENST00000492772 KRTAP5-10Q6L8G5 202 aa4.02□□□□□ -1.77
SND1-215ENST00000492772 PP632Q6XCG6 107 aa4.02□□□□□ -1.77
SND1-215ENST00000492772 SMIM20Q8N5G0 67 aa4□□□□□ -1.77
SND1-215ENST00000492772 CHKB-CPT1BH3BT56 60 aa3.96□□□□□ -1.78
SND1-215ENST00000492772 KRTAP13-4Q3LI77 160 aa3.95□□□□□ -1.78
SND1-215ENST00000492772 MT1MQ8N339 61 aa3.95□□□□□ -1.78
SND1-215ENST00000492772 KRTAP19-5Q3LI72 72 aa3.94□□□□□ -1.78
SND1-215ENST00000492772 KRTAP5-4Q6L8H1 288 aa3.94□□□□□ -1.78
SND1-215ENST00000492772 A0A0D9SG42 100 aa3.93□□□□□ -1.78
SND1-215ENST00000492772 SPANXA2-OT1Q8N9U9 137 aa3.92□□□□□ -1.78
SND1-215ENST00000492772 K7ERU9 68 aa3.91□□□□□ -1.78
SND1-215ENST00000492772 KRTAP5-7Q6L8G8 165 aa3.91□□□□□ -1.78
SND1-215ENST00000492772 PRO0628Q9UI54 55 aa3.91□□□□□ -1.78
SND1-215ENST00000492772 KRTAP4-6Q9BYQ5 205 aa3.9□□□□□ -1.79
SND1-215ENST00000492772 MT1LQ93083 61 aa3.89□□□□□ -1.79
SND1-215ENST00000492772 SNURFQ9Y675 71 aa3.87□□□□□ -1.79
SND1-215ENST00000492772 KRTAP5-3Q6L8H2 238 aa3.85□□□□□ -1.79
SND1-215ENST00000492772 SERP2Q8N6R1 65 aa3.84□□□□□ -1.79
SND1-215ENST00000492772 KRTAP4-3Q9BYR4 195 aa3.83□□□□□ -1.8
SND1-215ENST00000492772 LOC100996750A0A140TA64 210 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms