RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 PCP4L1A6NKN8 68 aa7.59□□□□□ -1.19
SGMS1-204ENST00000492601 CRIPTQ9P021 101 aa7.54□□□□□ -1.2
SGMS1-204ENST00000492601 HIST1H4AP62805 103 aaKnown RBP7.53□□□□□ -1.2
SGMS1-204ENST00000492601 ACYP1P07311 99 aa7.52□□□□□ -1.21
SGMS1-204ENST00000492601 IMUPQ9GZP8 106 aa7.52□□□□□ -1.21
SGMS1-204ENST00000492601 H0Y9P7 68 aa7.51□□□□□ -1.21
SGMS1-204ENST00000492601 UQCRQO14949 82 aa7.5□□□□□ -1.21
SGMS1-204ENST00000492601 NDUFC1O43677 76 aa7.49□□□□□ -1.21
SGMS1-204ENST00000492601 ATP5EP2Q5VTU8 51 aa7.49□□□□□ -1.21
SGMS1-204ENST00000492601 ATOX1O00244 68 aa7.47□□□□□ -1.21
SGMS1-204ENST00000492601 FAM240AA0A1B0GVK7 77 aa7.46□□□□□ -1.22
SGMS1-204ENST00000492601 H0YAA0 97 aa7.42□□□□□ -1.22
SGMS1-204ENST00000492601 KRTAP5-9P26371 169 aa7.41□□□□□ -1.22
SGMS1-204ENST00000492601 ADM2Q7Z4H4 148 aa7.41□□□□□ -1.22
SGMS1-204ENST00000492601 KMT2DO14686 5537 aa7.4□□□□□ -1.22
SGMS1-204ENST00000492601 A8MUN3 132 aa7.38□□□□□ -1.23
SGMS1-204ENST00000492601 LINC00208Q96KT6 92 aa7.38□□□□□ -1.23
SGMS1-204ENST00000492601 MDN1Q9NU22 5596 aa7.35□□□□□ -1.23
SGMS1-204ENST00000492601 KRTAP20-1Q3LI63 56 aa7.35□□□□□ -1.23
SGMS1-204ENST00000492601 LINC00643Q86TS7 51 aa7.34□□□□□ -1.23
SGMS1-204ENST00000492601 MP68P56378 58 aa7.29□□□□□ -1.24
SGMS1-204ENST00000492601 OCR1Q9BZK8 76 aa7.29□□□□□ -1.24
SGMS1-204ENST00000492601 MT1XP80297 61 aa7.26□□□□□ -1.25
SGMS1-204ENST00000492601 PRO2289Q9P1D8 64 aa7.26□□□□□ -1.25
SGMS1-204ENST00000492601 PLAC4Q8WY50 150 aa7.25□□□□□ -1.25
SGMS1-204ENST00000492601 P0C880 135 aa7.22□□□□□ -1.25
SGMS1-204ENST00000492601 R4GN34 69 aa7.22□□□□□ -1.25
SGMS1-204ENST00000492601 SPRR2FQ96RM1 72 aa7.21□□□□□ -1.26
SGMS1-204ENST00000492601 M0QZ58 72 aa7.16□□□□□ -1.26
SGMS1-204ENST00000492601 C20orf197Q8N268 126 aa7.16□□□□□ -1.26
SGMS1-204ENST00000492601 A0A1B0GV90 55 aa7.14□□□□□ -1.27
SGMS1-204ENST00000492601 H3BPC8 53 aa7.14□□□□□ -1.27
SGMS1-204ENST00000492601 DMAC1Q96GE9 116 aa7.14□□□□□ -1.27
SGMS1-204ENST00000492601 SPRR2EP22531 72 aa7.13□□□□□ -1.27
SGMS1-204ENST00000492601 SPRR2BP35325 72 aa7.13□□□□□ -1.27
SGMS1-204ENST00000492601 SPRR2AP35326 72 aa7.13□□□□□ -1.27
SGMS1-204ENST00000492601 KRTAP8-1Q8IUC2 63 aa7.13□□□□□ -1.27
SGMS1-204ENST00000492601 KRTAP2-3P0C7H8 128 aa7.11□□□□□ -1.27
SGMS1-204ENST00000492601 KRTAP3-2Q9BYR7 98 aa7.11□□□□□ -1.27
SGMS1-204ENST00000492601 KRTAP2-4Q9BYR9 128 aa7.11□□□□□ -1.27
SGMS1-204ENST00000492601 LINC01554Q52M75 96 aa7.1□□□□□ -1.27
SGMS1-204ENST00000492601 SCGB1A1P11684 91 aa7.09□□□□□ -1.27
SGMS1-204ENST00000492601 KRTAP12-2P59991 146 aa7.07□□□□□ -1.28
SGMS1-204ENST00000492601 J3QR89 54 aa7.03□□□□□ -1.28
SGMS1-204ENST00000492601 KRTAP4-8A0A0G2JLE6 195 aa7.02□□□□□ -1.29
SGMS1-204ENST00000492601 KRTAP4-8Q9BYQ9 185 aa7.02□□□□□ -1.29
SGMS1-204ENST00000492601 LCE1AQ5T7P2 110 aa7□□□□□ -1.29
SGMS1-204ENST00000492601 TRAV7A0A075B6U4 112 aa6.97□□□□□ -1.29
SGMS1-204ENST00000492601 ACYP2P14621 99 aa6.94□□□□□ -1.3
SGMS1-204ENST00000492601 KRTAP10-7P60409 375 aaPredicted RBP6.94□□□□□ -1.3
SGMS1-204ENST00000492601 MT-ATP8P03928 68 aa6.91□□□□□ -1.3
SGMS1-204ENST00000492601 SPRR2DP22532 72 aa6.9□□□□□ -1.3
SGMS1-204ENST00000492601 SPTSSBQ8NFR3 76 aa6.88□□□□□ -1.31
SGMS1-204ENST00000492601 KRTAP10-12P60413 245 aa6.87□□□□□ -1.31
SGMS1-204ENST00000492601 KRTAP2-2Q9BYT5 123 aa6.87□□□□□ -1.31
SGMS1-204ENST00000492601 KRTAP2-1Q9BYU5 128 aa6.87□□□□□ -1.31
SGMS1-204ENST00000492601 CHKB-CPT1BH3BT56 60 aa6.83□□□□□ -1.32
SGMS1-204ENST00000492601 SMIM20Q8N5G0 67 aa6.81□□□□□ -1.32
SGMS1-204ENST00000492601 SNURFQ9Y675 71 aa6.76□□□□□ -1.33
SGMS1-204ENST00000492601 LCE3BQ5TA77 95 aa6.72□□□□□ -1.33
SGMS1-204ENST00000492601 K7ERU9 68 aa6.69□□□□□ -1.34
SGMS1-204ENST00000492601 KRTAP13-4Q3LI77 160 aa6.69□□□□□ -1.34
SGMS1-204ENST00000492601 SPANXA2-OT1Q8N9U9 137 aa6.64□□□□□ -1.35
SGMS1-204ENST00000492601 CAMK2N1Q7Z7J9 78 aa6.63□□□□□ -1.35
SGMS1-204ENST00000492601 SERP2Q8N6R1 65 aa6.55□□□□□ -1.36
SGMS1-204ENST00000492601 COA5Q86WW8 74 aa6.51□□□□□ -1.37
SGMS1-204ENST00000492601 A0A0D9SG42 100 aa6.49□□□□□ -1.37
SGMS1-204ENST00000492601 DSTQ03001 7570 aaKnown RBP6.49□□□□□ -1.37
SGMS1-204ENST00000492601 KRTAP19-7Q3SYF9 63 aa6.48□□□□□ -1.37
SGMS1-204ENST00000492601 MT1EP04732 61 aa6.44□□□□□ -1.38
SGMS1-204ENST00000492601 SEC61GP60059 68 aa6.44□□□□□ -1.38
SGMS1-204ENST00000492601 LCE5AQ5TCM9 118 aa6.44□□□□□ -1.38
SGMS1-204ENST00000492601 SERP1Q9Y6X1 66 aa6.44□□□□□ -1.38
SGMS1-204ENST00000492601 SPATA8Q6RVD6 105 aa6.42□□□□□ -1.38
SGMS1-204ENST00000492601 KRTAP19-3Q7Z4W3 81 aa6.4□□□□□ -1.38
SGMS1-204ENST00000492601 SPINT4Q6UDR6 99 aa6.39□□□□□ -1.39
SGMS1-204ENST00000492601 A0A1B0GU33 70 aa6.35□□□□□ -1.39
SGMS1-204ENST00000492601 KRTAP4-9Q9BYQ8 210 aa6.32□□□□□ -1.4
SGMS1-204ENST00000492601 KRTAP12-1P59990 96 aa6.31□□□□□ -1.4
SGMS1-204ENST00000492601 KRTAP19-5Q3LI72 72 aa6.31□□□□□ -1.4
SGMS1-204ENST00000492601 GPR98Q8WXG9 6306 aa6.29□□□□□ -1.4
SGMS1-204ENST00000492601 COX7CP15954 63 aa6.29□□□□□ -1.4
SGMS1-204ENST00000492601 CYSTM1Q9H1C7 97 aa6.27□□□□□ -1.41
SGMS1-204ENST00000492601 H7BZZ5 65 aa6.24□□□□□ -1.41
SGMS1-204ENST00000492601 MT1GP13640 62 aa6.23□□□□□ -1.41
SGMS1-204ENST00000492601 PP632Q6XCG6 107 aa6.18□□□□□ -1.42
SGMS1-204ENST00000492601 A0A1B0GU69 56 aa6.17□□□□□ -1.42
SGMS1-204ENST00000492601 SMIM26A0A096LP01 95 aa6.16□□□□□ -1.42
SGMS1-204ENST00000492601 A8MU10 97 aa6.16□□□□□ -1.42
SGMS1-204ENST00000492601 MT1MQ8N339 61 aa6.14□□□□□ -1.43
SGMS1-204ENST00000492601 MT1LQ93083 61 aa6.13□□□□□ -1.43
SGMS1-204ENST00000492601 LCE1DQ5T752 114 aa6.12□□□□□ -1.43
SGMS1-204ENST00000492601 LCE3AQ5TA76 89 aa6.09□□□□□ -1.43
SGMS1-204ENST00000492601 C10orf95Q9H7T3 257 aa6.08□□□□□ -1.44
SGMS1-204ENST00000492601 HMCN1Q96RW7 5635 aa6.06□□□□□ -1.44
SGMS1-204ENST00000492601 MT4P47944 62 aa6.06□□□□□ -1.44
SGMS1-204ENST00000492601 TNP1P09430 55 aa6.05□□□□□ -1.44
SGMS1-204ENST00000492601 LCE4AQ5TA78 99 aa6.05□□□□□ -1.44
SGMS1-204ENST00000492601 KRTAP4-3Q9BYR4 195 aa6.05□□□□□ -1.44
SGMS1-204ENST00000492601 ANAPC13Q9BS18 74 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms