RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 C1orf64Q8NEQ6 169 aa2.67□□□□□ -1.98
PDLIM1-203ENST00000490391 SNAPINO95295 136 aa2.66□□□□□ -1.98
PDLIM1-203ENST00000490391 MT1EP04732 61 aa2.66□□□□□ -1.98
PDLIM1-203ENST00000490391 ATOH7Q8N100 152 aa2.66□□□□□ -1.98
PDLIM1-203ENST00000490391 H0YAA0 97 aa2.65□□□□□ -1.99
PDLIM1-203ENST00000490391 NDUFS5O43920 106 aa2.65□□□□□ -1.99
PDLIM1-203ENST00000490391 PDE6GP18545 87 aa2.65□□□□□ -1.99
PDLIM1-203ENST00000490391 SVBPQ8N300 66 aa2.65□□□□□ -1.99
PDLIM1-203ENST00000490391 ORMDL1Q9P0S3 153 aa2.64□□□□□ -1.99
PDLIM1-203ENST00000490391 A0A087WVE0 104 aa2.63□□□□□ -1.99
PDLIM1-203ENST00000490391 hDV103S1A0JD37 113 aa2.63□□□□□ -1.99
PDLIM1-203ENST00000490391 TMEM256-PLSCR3K7ERE1 68 aa2.62□□□□□ -1.99
PDLIM1-203ENST00000490391 KRTDAPP60985 99 aa2.62□□□□□ -1.99
PDLIM1-203ENST00000490391 KRTAP20-2Q3LI61 65 aa2.62□□□□□ -1.99
PDLIM1-203ENST00000490391 H3BQ85 93 aa2.61□□□□□ -1.99
PDLIM1-203ENST00000490391 A0A0B4J2C4 111 aa2.59□□□□□ -1.99
PDLIM1-203ENST00000490391 DNAL4O96015 105 aa2.59□□□□□ -1.99
PDLIM1-203ENST00000490391 MT1GP13640 62 aa2.59□□□□□ -1.99
PDLIM1-203ENST00000490391 HIST1H4GQ99525 98 aa2.59□□□□□ -1.99
PDLIM1-203ENST00000490391 SYNE1Q8NF91 8797 aaKnown RBP2.58□□□□□ -2
PDLIM1-203ENST00000490391 HIST1H2BKO60814 126 aa2.58□□□□□ -2
PDLIM1-203ENST00000490391 HIST1H2BJP06899 126 aa2.58□□□□□ -2
PDLIM1-203ENST00000490391 HIST1H2BOP23527 126 aa2.58□□□□□ -2
PDLIM1-203ENST00000490391 HIST1H2BBP33778 126 aa2.58□□□□□ -2
PDLIM1-203ENST00000490391 HIST1H2BDP58876 126 aa2.58□□□□□ -2
PDLIM1-203ENST00000490391 HIST1H2BCP62807 126 aa2.58□□□□□ -2
PDLIM1-203ENST00000490391 NDUFA5Q16718 116 aa2.58□□□□□ -2
PDLIM1-203ENST00000490391 HIST2H2BEQ16778 126 aa2.58□□□□□ -2
PDLIM1-203ENST00000490391 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.58□□□□□ -2
PDLIM1-203ENST00000490391 ADM2Q7Z4H4 148 aa2.58□□□□□ -2
PDLIM1-203ENST00000490391 HIST1H2BHQ93079 126 aa2.58□□□□□ -2
PDLIM1-203ENST00000490391 HIST1H2BNQ99877 126 aa2.58□□□□□ -2
PDLIM1-203ENST00000490391 HIST1H2BMQ99879 126 aa2.58□□□□□ -2
PDLIM1-203ENST00000490391 MT1MQ8N339 61 aa2.57□□□□□ -2
PDLIM1-203ENST00000490391 C9JAW5 83 aa2.55□□□□□ -2
PDLIM1-203ENST00000490391 HCG22E2RYF7 251 aa2.54□□□□□ -2
PDLIM1-203ENST00000490391 PP632Q6XCG6 107 aa2.54□□□□□ -2
PDLIM1-203ENST00000490391 CEND1Q8N111 149 aa2.54□□□□□ -2
PDLIM1-203ENST00000490391 R4GN34 69 aa2.54□□□□□ -2
PDLIM1-203ENST00000490391 A0A1B0GW54 56 aa2.53□□□□□ -2
PDLIM1-203ENST00000490391 CXCL6P80162 114 aa2.53□□□□□ -2
PDLIM1-203ENST00000490391 PRO1854Q9UHT4 67 aa2.53□□□□□ -2
PDLIM1-203ENST00000490391 COA6Q5JTJ3 125 aaKnown RBP2.52□□□□□ -2.01
PDLIM1-203ENST00000490391 M0QZ58 72 aa2.5□□□□□ -2.01
PDLIM1-203ENST00000490391 P0C880 135 aa2.5□□□□□ -2.01
PDLIM1-203ENST00000490391 NREPQ16612 68 aa2.49□□□□□ -2.01
PDLIM1-203ENST00000490391 LOC110117498A0A087WWA1 95 aa2.48□□□□□ -2.01
PDLIM1-203ENST00000490391 NDUFC1O43677 76 aa2.48□□□□□ -2.01
PDLIM1-203ENST00000490391 LINC01554Q52M75 96 aa2.48□□□□□ -2.01
PDLIM1-203ENST00000490391 CASC2Q6XLA1 102 aa2.48□□□□□ -2.01
PDLIM1-203ENST00000490391 HSBP1L1C9JCN9 74 aa2.47□□□□□ -2.01
PDLIM1-203ENST00000490391 COX8AP10176 69 aa2.47□□□□□ -2.01
PDLIM1-203ENST00000490391 HIST3H2BBQ8N257 126 aa2.47□□□□□ -2.01
PDLIM1-203ENST00000490391 DLEU1O43261 78 aa2.46□□□□□ -2.02
PDLIM1-203ENST00000490391 FXYD2P54710 66 aa2.46□□□□□ -2.02
PDLIM1-203ENST00000490391 MT1LQ93083 61 aa2.46□□□□□ -2.02
PDLIM1-203ENST00000490391 KRTAP19-5Q3LI72 72 aa2.45□□□□□ -2.02
PDLIM1-203ENST00000490391 Q8N9L7 120 aa2.45□□□□□ -2.02
PDLIM1-203ENST00000490391 HIGD1BQ9P298 99 aa2.45□□□□□ -2.02
PDLIM1-203ENST00000490391 BAALC-AS2P0C853 105 aa2.44□□□□□ -2.02
PDLIM1-203ENST00000490391 PSMB2P49721 201 aa2.44□□□□□ -2.02
PDLIM1-203ENST00000490391 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
PDLIM1-203ENST00000490391 COX6CP09669 75 aa2.42□□□□□ -2.02
PDLIM1-203ENST00000490391 HIST1H2BLQ99880 126 aa2.42□□□□□ -2.02
PDLIM1-203ENST00000490391 JMJD7-PLA2G4BH0Y9G9 81 aa2.41□□□□□ -2.02
PDLIM1-203ENST00000490391 K7ERJ3 54 aa2.41□□□□□ -2.02
PDLIM1-203ENST00000490391 KRTAP12-4P60329 112 aa2.41□□□□□ -2.02
PDLIM1-203ENST00000490391 CYP4F30PQ9H0H9 118 aa2.41□□□□□ -2.02
PDLIM1-203ENST00000490391 C14orf132Q9NPU4 83 aa2.41□□□□□ -2.02
PDLIM1-203ENST00000490391 K7EP34 96 aa2.4□□□□□ -2.03
PDLIM1-203ENST00000490391 BPY2O14599 106 aa2.4□□□□□ -2.03
PDLIM1-203ENST00000490391 C20orf197Q8N268 126 aa2.4□□□□□ -2.03
PDLIM1-203ENST00000490391 C14orf144Q96I85 54 aa2.4□□□□□ -2.03
PDLIM1-203ENST00000490391 PCP4L1A6NKN8 68 aa2.37□□□□□ -2.03
PDLIM1-203ENST00000490391 SEC61GP60059 68 aa2.35□□□□□ -2.03
PDLIM1-203ENST00000490391 NAA38Q9BRA0 125 aaKnown RBP2.35□□□□□ -2.03
PDLIM1-203ENST00000490391 BATFQ16520 125 aa2.34□□□□□ -2.03
PDLIM1-203ENST00000490391 A0A1W2PPM0 123 aa2.33□□□□□ -2.04
PDLIM1-203ENST00000490391 SCGB1C2P0DMR2 95 aa2.33□□□□□ -2.04
PDLIM1-203ENST00000490391 TP53AIP1Q9HCN2 124 aa2.33□□□□□ -2.04
PDLIM1-203ENST00000490391 A0A0D9SG42 100 aa2.31□□□□□ -2.04
PDLIM1-203ENST00000490391 A8MU10 97 aa2.3□□□□□ -2.04
PDLIM1-203ENST00000490391 ACYP1P07311 99 aa2.3□□□□□ -2.04
PDLIM1-203ENST00000490391 SPATA45Q537H7 98 aa2.3□□□□□ -2.04
PDLIM1-203ENST00000490391 MT-ATP8P03928 68 aa2.29□□□□□ -2.04
PDLIM1-203ENST00000490391 ATXN8Q156A1 80 aa2.29□□□□□ -2.04
PDLIM1-203ENST00000490391 TRAV22A0A0B4J277 110 aa2.28□□□□□ -2.04
PDLIM1-203ENST00000490391 LOC101927531A0A1B0GV80 90 aa2.28□□□□□ -2.04
PDLIM1-203ENST00000490391 S100A2P29034 98 aa2.28□□□□□ -2.04
PDLIM1-203ENST00000490391 HSD52Q0P140 79 aa2.28□□□□□ -2.04
PDLIM1-203ENST00000490391 VAMP8Q9BV40 100 aa2.28□□□□□ -2.04
PDLIM1-203ENST00000490391 PRO0461Q9UI25 63 aa2.26□□□□□ -2.05
PDLIM1-203ENST00000490391 CAMK2N1Q7Z7J9 78 aa2.24□□□□□ -2.05
PDLIM1-203ENST00000490391 C10orf95Q9H7T3 257 aa2.21□□□□□ -2.06
PDLIM1-203ENST00000490391 SPCS1Q9Y6A9 102 aa2.16□□□□□ -2.06
PDLIM1-203ENST00000490391 KRTAP13-4Q3LI77 160 aa2.15□□□□□ -2.07
PDLIM1-203ENST00000490391 H0Y9P7 68 aa2.13□□□□□ -2.07
PDLIM1-203ENST00000490391 H3BT86 120 aa2.13□□□□□ -2.07
PDLIM1-203ENST00000490391 S100A6P06703 90 aa2.13□□□□□ -2.07
PDLIM1-203ENST00000490391 UBL5Q9BZL1 73 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms