RNA–Protein interactions for RNA: ENST00000490299.5

RPS6KC1-204, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best)

Gene RPS6KC1, Length 5,154 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-204ENST00000490299 ATMQ13315 3056 aa1.67□□□□□ -2.14
RPS6KC1-204ENST00000490299 DNAH8Q96JB1 4490 aa1.67□□□□□ -2.14
RPS6KC1-204ENST00000490299 DMXL2Q8TDJ6 3036 aa1.67□□□□□ -2.14
RPS6KC1-204ENST00000490299 KRTAP9-2Q9BYQ4 174 aa1.67□□□□□ -2.14
RPS6KC1-204ENST00000490299 KALRNO60229 2985 aa1.67□□□□□ -2.14
RPS6KC1-204ENST00000490299 KRTAP9-6A0A140TA67 174 aa1.66□□□□□ -2.14
RPS6KC1-204ENST00000490299 CRCT1Q9UGL9 99 aa1.65□□□□□ -2.14
RPS6KC1-204ENST00000490299 ADGRG4Q8IZF6 3080 aa1.65□□□□□ -2.14
RPS6KC1-204ENST00000490299 KRTAP10-12P60413 245 aa1.65□□□□□ -2.15
RPS6KC1-204ENST00000490299 COL12A1Q99715 3063 aa1.65□□□□□ -2.15
RPS6KC1-204ENST00000490299 OTOGQ6ZRI0 2925 aa1.65□□□□□ -2.15
RPS6KC1-204ENST00000490299 DNAH11Q96DT5 4516 aa1.65□□□□□ -2.15
RPS6KC1-204ENST00000490299 TACC2O95359 2948 aa1.65□□□□□ -2.15
RPS6KC1-204ENST00000490299 PKHD1P08F94 4074 aa1.65□□□□□ -2.15
RPS6KC1-204ENST00000490299 FRAS1Q86XX4 4008 aa1.64□□□□□ -2.15
RPS6KC1-204ENST00000490299 VPS13CQ709C8 3753 aa1.63□□□□□ -2.15
RPS6KC1-204ENST00000490299 LRP1BQ9NZR2 4599 aa1.63□□□□□ -2.15
RPS6KC1-204ENST00000490299 ZZEF1O43149 2961 aa1.62□□□□□ -2.15
RPS6KC1-204ENST00000490299 KRTAP19-1Q8IUB9 90 aa1.62□□□□□ -2.15
RPS6KC1-204ENST00000490299 CRYBG3Q68DQ2 2970 aa1.62□□□□□ -2.15
RPS6KC1-204ENST00000490299 NBEAL2Q6ZNJ1 2754 aa1.61□□□□□ -2.15
RPS6KC1-204ENST00000490299 HERC1Q15751 4861 aa1.61□□□□□ -2.15
RPS6KC1-204ENST00000490299 KRTAP12-3P60328 96 aa1.61□□□□□ -2.15
RPS6KC1-204ENST00000490299 KRTAP9-9Q9BYP9 154 aa1.61□□□□□ -2.15
RPS6KC1-204ENST00000490299 KRTAP9-4Q9BYQ2 154 aa1.61□□□□□ -2.15
RPS6KC1-204ENST00000490299 MT1HL1P0DM35 61 aa1.6□□□□□ -2.15
RPS6KC1-204ENST00000490299 SPRR2EP22531 72 aa1.6□□□□□ -2.15
RPS6KC1-204ENST00000490299 SPRR2BP35325 72 aa1.6□□□□□ -2.15
RPS6KC1-204ENST00000490299 SPRR2AP35326 72 aa1.6□□□□□ -2.15
RPS6KC1-204ENST00000490299 ASH1LQ9NR48 2969 aaKnown RBP1.6□□□□□ -2.15
RPS6KC1-204ENST00000490299 SRRM2Q9UQ35 2752 aaKnown RBP1.6□□□□□ -2.15
RPS6KC1-204ENST00000490299 DCHS2Q6V1P9 2916 aa1.6□□□□□ -2.15
RPS6KC1-204ENST00000490299 KRTAP10-4P60372 401 aaPredicted RBP1.59□□□□□ -2.15
RPS6KC1-204ENST00000490299 SPRR2FQ96RM1 72 aa1.59□□□□□ -2.15
RPS6KC1-204ENST00000490299 APCP25054 2843 aa1.59□□□□□ -2.15
RPS6KC1-204ENST00000490299 TNXBP22105 4242 aa1.59□□□□□ -2.15
RPS6KC1-204ENST00000490299 CUBNO60494 3623 aa1.59□□□□□ -2.16
RPS6KC1-204ENST00000490299 CSMD2Q7Z408 3487 aa1.59□□□□□ -2.16
RPS6KC1-204ENST00000490299 LCE3AQ5TA76 89 aa1.58□□□□□ -2.16
RPS6KC1-204ENST00000490299 CELSR1Q9NYQ6 3014 aa1.58□□□□□ -2.16
RPS6KC1-204ENST00000490299 PKD1L1Q8TDX9 2849 aa1.57□□□□□ -2.16
RPS6KC1-204ENST00000490299 SPRR2DP22532 72 aa1.57□□□□□ -2.16
RPS6KC1-204ENST00000490299 MUC17Q685J3 4493 aa1.57□□□□□ -2.16
RPS6KC1-204ENST00000490299 NBPF19A0A087WUL8 3843 aa1.57□□□□□ -2.16
RPS6KC1-204ENST00000490299 KRTAP20-1Q3LI63 56 aa1.57□□□□□ -2.16
RPS6KC1-204ENST00000490299 HRNRQ86YZ3 2850 aaPredicted RBP1.57□□□□□ -2.16
RPS6KC1-204ENST00000490299 PLECQ15149 4684 aaKnown RBP1.56□□□□□ -2.16
RPS6KC1-204ENST00000490299 BIRC6Q9NR09 4857 aa1.55□□□□□ -2.16
RPS6KC1-204ENST00000490299 KRTAP4-5Q9BYR2 181 aa1.55□□□□□ -2.16
RPS6KC1-204ENST00000490299 VPS13BQ7Z7G8 4022 aa1.55□□□□□ -2.16
RPS6KC1-204ENST00000490299 GPR98Q8WXG9 6306 aa1.55□□□□□ -2.16
RPS6KC1-204ENST00000490299 DNAH5Q8TE73 4624 aa1.55□□□□□ -2.16
RPS6KC1-204ENST00000490299 APOBP04114 4563 aaKnown RBP1.55□□□□□ -2.16
RPS6KC1-204ENST00000490299 TGP01266 2768 aa1.55□□□□□ -2.16
RPS6KC1-204ENST00000490299 FBN2P35556 2912 aa1.54□□□□□ -2.16
RPS6KC1-204ENST00000490299 FAT1Q14517 4588 aa1.54□□□□□ -2.16
RPS6KC1-204ENST00000490299 KRTAP4-8A0A0G2JLE6 195 aa1.54□□□□□ -2.16
RPS6KC1-204ENST00000490299 VWFP04275 2813 aa1.54□□□□□ -2.16
RPS6KC1-204ENST00000490299 CELSR2Q9HCU4 2923 aa1.53□□□□□ -2.16
RPS6KC1-204ENST00000490299 NF1P21359 2839 aa1.53□□□□□ -2.17
RPS6KC1-204ENST00000490299 PDZD2O15018 2839 aa1.52□□□□□ -2.17
RPS6KC1-204ENST00000490299 NIPBLQ6KC79 2804 aaeCLIP1.52□□□□□ -2.17
RPS6KC1-204ENST00000490299 KRTAP9-7A8MTY7 169 aa1.52□□□□□ -2.17
RPS6KC1-204ENST00000490299 KRTAP12-4P60329 112 aa1.51□□□□□ -2.17
RPS6KC1-204ENST00000490299 ZANQ9Y493 2812 aa1.51□□□□□ -2.17
RPS6KC1-204ENST00000490299 MXRA5Q9NR99 2828 aa1.5□□□□□ -2.17
RPS6KC1-204ENST00000490299 ZNF469Q96JG9 3925 aaPredicted RBP1.5□□□□□ -2.17
RPS6KC1-204ENST00000490299 MEGF8Q7Z7M0 2845 aa1.5□□□□□ -2.17
RPS6KC1-204ENST00000490299 KRTAP4-2Q9BYR5 136 aa1.5□□□□□ -2.17
RPS6KC1-204ENST00000490299 KRTAP4-7Q9BYR0 210 aa1.5□□□□□ -2.17
RPS6KC1-204ENST00000490299 KRTAP5-3Q6L8H2 238 aa1.49□□□□□ -2.17
RPS6KC1-204ENST00000490299 FBN1P35555 2871 aaKnown RBP1.48□□□□□ -2.17
RPS6KC1-204ENST00000490299 KRTAP9-8Q9BYQ0 159 aa1.48□□□□□ -2.17
RPS6KC1-204ENST00000490299 SPRR2GQ9BYE4 73 aa1.48□□□□□ -2.17
RPS6KC1-204ENST00000490299 KRTAP4-9Q9BYQ8 210 aa1.47□□□□□ -2.17
RPS6KC1-204ENST00000490299 TRRAPQ9Y4A5 3859 aa1.45□□□□□ -2.18
RPS6KC1-204ENST00000490299 KRTAP10-5P60370 271 aa1.45□□□□□ -2.18
RPS6KC1-204ENST00000490299 LRP1Q07954 4544 aaKnown RBP1.45□□□□□ -2.18
RPS6KC1-204ENST00000490299 CSMD3Q7Z407 3707 aa1.44□□□□□ -2.18
RPS6KC1-204ENST00000490299 LCE3CQ5T5A8 94 aa1.44□□□□□ -2.18
RPS6KC1-204ENST00000490299 KRTAP2-3P0C7H8 128 aa1.42□□□□□ -2.18
RPS6KC1-204ENST00000490299 KRTAP2-4Q9BYR9 128 aa1.42□□□□□ -2.18
RPS6KC1-204ENST00000490299 MT1HP80294 61 aa1.41□□□□□ -2.18
RPS6KC1-204ENST00000490299 DNHD1Q96M86 4753 aa1.41□□□□□ -2.18
RPS6KC1-204ENST00000490299 LCE1DQ5T752 114 aa1.4□□□□□ -2.19
RPS6KC1-204ENST00000490299 KRTAP9-3Q9BYQ3 159 aa1.4□□□□□ -2.19
RPS6KC1-204ENST00000490299 STARD9Q9P2P6 4700 aa1.4□□□□□ -2.19
RPS6KC1-204ENST00000490299 MT2AP02795 61 aa1.4□□□□□ -2.19
RPS6KC1-204ENST00000490299 FLGP20930 4061 aaPredicted RBP1.4□□□□□ -2.19
RPS6KC1-204ENST00000490299 KRTAP19-5Q3LI72 72 aa1.39□□□□□ -2.19
RPS6KC1-204ENST00000490299 KRTAP4-11Q9BYQ6 195 aa1.39□□□□□ -2.19
RPS6KC1-204ENST00000490299 KRTAP19-8Q3LI54 63 aa1.38□□□□□ -2.19
RPS6KC1-204ENST00000490299 LCE4AQ5TA78 99 aa1.38□□□□□ -2.19
RPS6KC1-204ENST00000490299 KRTAP4-1Q9BYQ7 146 aa1.38□□□□□ -2.19
RPS6KC1-204ENST00000490299 LYSTQ99698 3801 aa1.38□□□□□ -2.19
RPS6KC1-204ENST00000490299 LCE3BQ5TA77 95 aa1.36□□□□□ -2.19
RPS6KC1-204ENST00000490299 MT1FP04733 61 aa1.35□□□□□ -2.19
RPS6KC1-204ENST00000490299 MT4P47944 62 aa1.34□□□□□ -2.19
RPS6KC1-204ENST00000490299 MACF1Q9UPN3 7388 aaKnown RBP1.34□□□□□ -2.19
RPS6KC1-204ENST00000490299 KRTAP2-2Q9BYT5 123 aa1.34□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms