RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 FLG2Q5D862 2391 aaPredicted RBP1.36□□□□□ -2.19
DEPDC1-204ENST00000489862 RNF213Q63HN8 5207 aa1.35□□□□□ -2.19
DEPDC1-204ENST00000489862 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.35□□□□□ -2.19
DEPDC1-204ENST00000489862 IGIPA6NJ69 53 aa1.35□□□□□ -2.19
DEPDC1-204ENST00000489862 F8VRH5 84 aa1.35□□□□□ -2.19
DEPDC1-204ENST00000489862 ATOX1O00244 68 aa1.35□□□□□ -2.19
DEPDC1-204ENST00000489862 IGKV4-1P06312 121 aa1.35□□□□□ -2.19
DEPDC1-204ENST00000489862 PLNP26678 52 aa1.35□□□□□ -2.19
DEPDC1-204ENST00000489862 KRTAP10-4P60372 401 aaPredicted RBP1.35□□□□□ -2.19
DEPDC1-204ENST00000489862 RPL39P62891 51 aaKnown RBP1.35□□□□□ -2.19
DEPDC1-204ENST00000489862 CLPSL2Q6UWE3 100 aa1.35□□□□□ -2.19
DEPDC1-204ENST00000489862 CDC42SE2Q9NRR3 84 aa1.35□□□□□ -2.19
DEPDC1-204ENST00000489862 COX8AP10176 69 aa1.34□□□□□ -2.19
DEPDC1-204ENST00000489862 COX6A2Q02221 97 aa1.34□□□□□ -2.19
DEPDC1-204ENST00000489862 Q6ZSA8 131 aa1.34□□□□□ -2.19
DEPDC1-204ENST00000489862 UBE2D4Q9Y2X8 147 aa1.34□□□□□ -2.19
DEPDC1-204ENST00000489862 LRP2P98164 4655 aa1.34□□□□□ -2.2
DEPDC1-204ENST00000489862 TRBV25-1A0A075B6N4 114 aa1.33□□□□□ -2.2
DEPDC1-204ENST00000489862 LINC00959A0A1B0GUT2 108 aa1.33□□□□□ -2.2
DEPDC1-204ENST00000489862 ANGP03950 147 aaKnown RBP1.33□□□□□ -2.2
DEPDC1-204ENST00000489862 Q96NJ1 140 aa1.33□□□□□ -2.2
DEPDC1-204ENST00000489862 AMELXQ99217 191 aa1.33□□□□□ -2.2
DEPDC1-204ENST00000489862 A0A1W2PPM0 123 aa1.33□□□□□ -2.2
DEPDC1-204ENST00000489862 SMR3BP02814 79 aaPredicted RBP1.33□□□□□ -2.2
DEPDC1-204ENST00000489862 ETDBQ3ZM63 59 aa1.33□□□□□ -2.2
DEPDC1-204ENST00000489862 BVES-AS1Q5T3Y7 98 aa1.33□□□□□ -2.2
DEPDC1-204ENST00000489862 TMEM170BQ5T4T1 132 aa1.33□□□□□ -2.2
DEPDC1-204ENST00000489862 KRTAP13-1Q8IUC0 172 aa1.33□□□□□ -2.2
DEPDC1-204ENST00000489862 PRO1854Q9UHT4 67 aa1.33□□□□□ -2.2
DEPDC1-204ENST00000489862 MYMXA0A1B0GTQ4 84 aa1.32□□□□□ -2.2
DEPDC1-204ENST00000489862 GVQW2A0A096LPI5 108 aaPredicted RBP1.31□□□□□ -2.2
DEPDC1-204ENST00000489862 ZNF815PA8K554 130 aa1.31□□□□□ -2.2
DEPDC1-204ENST00000489862 UNQ6190/PRO20217Q6UXQ8 127 aa1.31□□□□□ -2.2
DEPDC1-204ENST00000489862 CDKN2A-AS1Q9UH64 79 aa1.31□□□□□ -2.2
DEPDC1-204ENST00000489862 LPAP08519 4548 aa1.31□□□□□ -2.2
DEPDC1-204ENST00000489862 DMBT1Q9UGM3 2413 aaPredicted RBP1.3□□□□□ -2.2
DEPDC1-204ENST00000489862 A0A096LNI7 61 aa1.3□□□□□ -2.2
DEPDC1-204ENST00000489862 NDUFA1O15239 70 aa1.3□□□□□ -2.2
DEPDC1-204ENST00000489862 SMIM13P0DJ93 91 aa1.3□□□□□ -2.2
DEPDC1-204ENST00000489862 SPAG11BQ08648 103 aa1.3□□□□□ -2.2
DEPDC1-204ENST00000489862 SPAG11AQ6PDA7 123 aa1.3□□□□□ -2.2
DEPDC1-204ENST00000489862 ZCCHC13Q8WW36 166 aaKnown RBP1.3□□□□□ -2.2
DEPDC1-204ENST00000489862 C6orf48Q9UBA6 75 aa1.3□□□□□ -2.2
DEPDC1-204ENST00000489862 SNURFQ9Y675 71 aa1.3□□□□□ -2.2
DEPDC1-204ENST00000489862 PLAC8Q9NZF1 115 aa1.29□□□□□ -2.2
DEPDC1-204ENST00000489862 MUC2Q02817 5179 aa1.29□□□□□ -2.2
DEPDC1-204ENST00000489862 H3BUT2 72 aa1.29□□□□□ -2.2
DEPDC1-204ENST00000489862 MT1HL1P0DM35 61 aa1.29□□□□□ -2.2
DEPDC1-204ENST00000489862 Q5VSD8 79 aa1.29□□□□□ -2.2
DEPDC1-204ENST00000489862 MUSTN1Q8IVN3 82 aa1.29□□□□□ -2.2
DEPDC1-204ENST00000489862 SPCS1Q9Y6A9 102 aa1.29□□□□□ -2.2
DEPDC1-204ENST00000489862 FCGBPQ9Y6R7 5405 aaPredicted RBP1.28□□□□□ -2.2
DEPDC1-204ENST00000489862 Q6ZQY7 126 aa1.28□□□□□ -2.2
DEPDC1-204ENST00000489862 Q8IZM0 81 aa1.28□□□□□ -2.2
DEPDC1-204ENST00000489862 TOMM7Q9P0U1 55 aa1.28□□□□□ -2.2
DEPDC1-204ENST00000489862 TRBV30A0A0K0K1B3 111 aa1.27□□□□□ -2.21
DEPDC1-204ENST00000489862 NDUFC1O43677 76 aa1.27□□□□□ -2.21
DEPDC1-204ENST00000489862 LINC00158P58513 81 aa1.27□□□□□ -2.21
DEPDC1-204ENST00000489862 KRTAP12-4P60329 112 aa1.27□□□□□ -2.21
DEPDC1-204ENST00000489862 KLKP1Q107X0 134 aa1.27□□□□□ -2.21
DEPDC1-204ENST00000489862 COX17Q14061 63 aa1.27□□□□□ -2.21
DEPDC1-204ENST00000489862 LINC00308Q8TCZ7 52 aa1.27□□□□□ -2.21
DEPDC1-204ENST00000489862 COX6CP09669 75 aa1.26□□□□□ -2.21
DEPDC1-204ENST00000489862 FAT4Q6V0I7 4981 aa1.26□□□□□ -2.21
DEPDC1-204ENST00000489862 MUC17Q685J3 4493 aa1.26□□□□□ -2.21
DEPDC1-204ENST00000489862 F8WEM9 126 aa1.26□□□□□ -2.21
DEPDC1-204ENST00000489862 KRTAP12-3P60328 96 aa1.26□□□□□ -2.21
DEPDC1-204ENST00000489862 LINC01558Q9Y6Z2 57 aa1.26□□□□□ -2.21
DEPDC1-204ENST00000489862 H0YGX0 51 aa1.25□□□□□ -2.21
DEPDC1-204ENST00000489862 ATXN8Q156A1 80 aa1.25□□□□□ -2.21
DEPDC1-204ENST00000489862 LINC01600Q96MT4 127 aa1.25□□□□□ -2.21
DEPDC1-204ENST00000489862 LINC00472Q9H8W2 130 aa1.25□□□□□ -2.21
DEPDC1-204ENST00000489862 SMIM11BQ8TCY0 68 aa1.24□□□□□ -2.21
DEPDC1-204ENST00000489862 PRR15LQ9BU68 103 aa1.24□□□□□ -2.21
DEPDC1-204ENST00000489862 A0A087WVE0 104 aa1.23□□□□□ -2.21
DEPDC1-204ENST00000489862 NCR3O14931 201 aa1.23□□□□□ -2.21
DEPDC1-204ENST00000489862 SPRR1AP35321 89 aa1.23□□□□□ -2.21
DEPDC1-204ENST00000489862 SPINK6Q6UWN8 80 aa1.23□□□□□ -2.21
DEPDC1-204ENST00000489862 PLAC4Q8WY50 150 aa1.23□□□□□ -2.21
DEPDC1-204ENST00000489862 LINC00575Q6W349 94 aa1.22□□□□□ -2.21
DEPDC1-204ENST00000489862 BCE1O60756 84 aa1.22□□□□□ -2.21
DEPDC1-204ENST00000489862 ACYP2P14621 99 aa1.22□□□□□ -2.21
DEPDC1-204ENST00000489862 PRLHP81277 87 aa1.22□□□□□ -2.21
DEPDC1-204ENST00000489862 KCNQ1DNQ9H478 68 aa1.22□□□□□ -2.21
DEPDC1-204ENST00000489862 COX7BP24311 80 aa1.21□□□□□ -2.22
DEPDC1-204ENST00000489862 ACYP1P07311 99 aa1.2□□□□□ -2.22
DEPDC1-204ENST00000489862 Q6ZRX8 168 aa1.2□□□□□ -2.22
DEPDC1-204ENST00000489862 SPRR4Q96PI1 79 aa1.2□□□□□ -2.22
DEPDC1-204ENST00000489862 FSIP2Q5CZC0 6907 aa1.2□□□□□ -2.22
DEPDC1-204ENST00000489862 MUC5BQ9HC84 5762 aaPredicted RBP1.2□□□□□ -2.22
DEPDC1-204ENST00000489862 ETDCA0A1B0GVM5 59 aa1.19□□□□□ -2.22
DEPDC1-204ENST00000489862 IGLV5-48A0A075B6I7 105 aa1.18□□□□□ -2.22
DEPDC1-204ENST00000489862 UQCR11O14957 56 aa1.18□□□□□ -2.22
DEPDC1-204ENST00000489862 SPINK7P58062 85 aa1.18□□□□□ -2.22
DEPDC1-204ENST00000489862 FLGP20930 4061 aaPredicted RBP1.18□□□□□ -2.22
DEPDC1-204ENST00000489862 TRBV7-4A0A0J9YYF1 115 aa1.18□□□□□ -2.22
DEPDC1-204ENST00000489862 SPRR1BP22528 89 aa1.18□□□□□ -2.22
DEPDC1-204ENST00000489862 LINC00643Q86TS7 51 aa1.18□□□□□ -2.22
DEPDC1-204ENST00000489862 DEFB105AQ8NG35 78 aa1.18□□□□□ -2.22
DEPDC1-204ENST00000489862 Q6JHZ5 121 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms