RNA–Protein interactions for RNA: ENST00000489475.5

HOXB3-210, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-210ENST00000489475 V9GYY9 64 aa13.42□□□□□ -0.26
HOXB3-210ENST00000489475 SPTSSBQ8NFR3 76 aa13.35□□□□□ -0.27
HOXB3-210ENST00000489475 S4R3F8 94 aa13.35□□□□□ -0.27
HOXB3-210ENST00000489475 LCA10Q71F78 164 aa13.3□□□□□ -0.28
HOXB3-210ENST00000489475 MUC2Q02817 5179 aa13.29□□□□□ -0.28
HOXB3-210ENST00000489475 KRTAP19-2Q3LHN2 52 aa13.25□□□□□ -0.29
HOXB3-210ENST00000489475 UBR4Q5T4S7 5183 aa13.24□□□□□ -0.29
HOXB3-210ENST00000489475 SEC61GP60059 68 aa13.21□□□□□ -0.29
HOXB3-210ENST00000489475 KRTAP3-3Q9BYR6 98 aa13.21□□□□□ -0.29
HOXB3-210ENST00000489475 LINC01558Q9Y6Z2 57 aa13.16□□□□□ -0.3
HOXB3-210ENST00000489475 PMAIP1Q13794 54 aa13.15□□□□□ -0.3
HOXB3-210ENST00000489475 RNF213Q63HN8 5207 aa13.11□□□□□ -0.31
HOXB3-210ENST00000489475 CSAG1Q6PB30 78 aa13.07□□□□□ -0.32
HOXB3-210ENST00000489475 PRR15LQ9BU68 103 aa13.06□□□□□ -0.32
HOXB3-210ENST00000489475 PSPHP1O15172 72 aa13.05□□□□□ -0.32
HOXB3-210ENST00000489475 A0A1B0GU69 56 aa13.02□□□□□ -0.32
HOXB3-210ENST00000489475 LCE2CQ5TA81 110 aa12.99□□□□□ -0.33
HOXB3-210ENST00000489475 FLGP20930 4061 aaPredicted RBP12.92□□□□□ -0.34
HOXB3-210ENST00000489475 Q5VV11 94 aa12.91□□□□□ -0.34
HOXB3-210ENST00000489475 KTN1-AS1Q86SY8 53 aa12.77□□□□□ -0.37
HOXB3-210ENST00000489475 MT1HP80294 61 aa12.75□□□□□ -0.37
HOXB3-210ENST00000489475 ADM2Q7Z4H4 148 aa12.75□□□□□ -0.37
HOXB3-210ENST00000489475 FAT4Q6V0I7 4981 aa12.75□□□□□ -0.37
HOXB3-210ENST00000489475 H0YAA0 97 aa12.74□□□□□ -0.37
HOXB3-210ENST00000489475 KRTAP3-2Q9BYR7 98 aa12.73□□□□□ -0.37
HOXB3-210ENST00000489475 KRTAP10-6P60371 365 aaPredicted RBP12.71□□□□□ -0.38
HOXB3-210ENST00000489475 M0R2T5 61 aa12.69□□□□□ -0.38
HOXB3-210ENST00000489475 CDC42SE1Q9NRR8 79 aa12.68□□□□□ -0.38
HOXB3-210ENST00000489475 A6NED7 52 aa12.67□□□□□ -0.38
HOXB3-210ENST00000489475 P0C880 135 aa12.65□□□□□ -0.38
HOXB3-210ENST00000489475 A0A1B0GU33 70 aa12.64□□□□□ -0.39
HOXB3-210ENST00000489475 UQCR11O14957 56 aa12.61□□□□□ -0.39
HOXB3-210ENST00000489475 A6NN06 94 aa12.58□□□□□ -0.4
HOXB3-210ENST00000489475 A8MU10 97 aa12.48□□□□□ -0.41
HOXB3-210ENST00000489475 MIR22HGQ0VDD5 57 aa12.46□□□□□ -0.42
HOXB3-210ENST00000489475 SPATA8Q6RVD6 105 aa12.41□□□□□ -0.42
HOXB3-210ENST00000489475 KRTAP13-4Q3LI77 160 aa12.35□□□□□ -0.43
HOXB3-210ENST00000489475 M0QZ58 72 aa12.34□□□□□ -0.43
HOXB3-210ENST00000489475 R4GN34 69 aa12.32□□□□□ -0.44
HOXB3-210ENST00000489475 LORP23490 312 aaPredicted RBP12.31□□□□□ -0.44
HOXB3-210ENST00000489475 LCE2AQ5TA79 106 aaPredicted RBP12.27□□□□□ -0.44
HOXB3-210ENST00000489475 KRTAP9-8Q9BYQ0 159 aa12.26□□□□□ -0.45
HOXB3-210ENST00000489475 MT2AP02795 61 aa12.23□□□□□ -0.45
HOXB3-210ENST00000489475 CRIPTQ9P021 101 aa12.23□□□□□ -0.45
HOXB3-210ENST00000489475 KRTAP10-10P60014 251 aa12.18□□□□□ -0.46
HOXB3-210ENST00000489475 A0A0D9SG42 100 aa12.17□□□□□ -0.46
HOXB3-210ENST00000489475 MT1FP04733 61 aa12.16□□□□□ -0.46
HOXB3-210ENST00000489475 LINC01554Q52M75 96 aa12.09□□□□□ -0.47
HOXB3-210ENST00000489475 SPRR2GQ9BYE4 73 aa11.97□□□□□ -0.49
HOXB3-210ENST00000489475 K7ERS5 55 aa11.95□□□□□ -0.5
HOXB3-210ENST00000489475 KRTAP19-1Q8IUB9 90 aa11.93□□□□□ -0.5
HOXB3-210ENST00000489475 KRTAP12-1P59990 96 aa11.9□□□□□ -0.5
HOXB3-210ENST00000489475 SPINT4Q6UDR6 99 aa11.89□□□□□ -0.51
HOXB3-210ENST00000489475 KRTAP12-2P59991 146 aa11.86□□□□□ -0.51
HOXB3-210ENST00000489475 KRTAP9-3Q9BYQ3 159 aa11.82□□□□□ -0.52
HOXB3-210ENST00000489475 PRAC1Q96KF2 57 aa11.75□□□□□ -0.53
HOXB3-210ENST00000489475 KRTAP19-8Q3LI54 63 aa11.65□□□□□ -0.55
HOXB3-210ENST00000489475 PLAC4Q8WY50 150 aa11.6□□□□□ -0.55
HOXB3-210ENST00000489475 CAMK2N1Q7Z7J9 78 aa11.55□□□□□ -0.56
HOXB3-210ENST00000489475 LCE2BO14633 110 aa11.5□□□□□ -0.57
HOXB3-210ENST00000489475 MT1BP07438 61 aa11.49□□□□□ -0.57
HOXB3-210ENST00000489475 ROMO1P60602 79 aa11.41□□□□□ -0.58
HOXB3-210ENST00000489475 H3BS24 57 aa11.3□□□□□ -0.6
HOXB3-210ENST00000489475 KRTAP25-1Q3LHN0 102 aa11.28□□□□□ -0.6
HOXB3-210ENST00000489475 C10orf95Q9H7T3 257 aa11.25□□□□□ -0.61
HOXB3-210ENST00000489475 LCE2DQ5TA82 110 aaPredicted RBP11.18□□□□□ -0.62
HOXB3-210ENST00000489475 USH2AO75445 5202 aa11.13□□□□□ -0.63
HOXB3-210ENST00000489475 MT1XP80297 61 aa11.12□□□□□ -0.63
HOXB3-210ENST00000489475 KRTAP10-5P60370 271 aa11.09□□□□□ -0.63
HOXB3-210ENST00000489475 PRO2289Q9P1D8 64 aa11.07□□□□□ -0.64
HOXB3-210ENST00000489475 TNP1P09430 55 aa10.96□□□□□ -0.65
HOXB3-210ENST00000489475 KRTAP19-6Q3LI70 58 aa10.81□□□□□ -0.68
HOXB3-210ENST00000489475 SSPOA2VEC9 5147 aa10.79□□□□□ -0.68
HOXB3-210ENST00000489475 KRTAP9-2Q9BYQ4 174 aa10.78□□□□□ -0.68
HOXB3-210ENST00000489475 FSIP2Q5CZC0 6907 aa10.74□□□□□ -0.69
HOXB3-210ENST00000489475 KRTAP10-7P60409 375 aaPredicted RBP10.66□□□□□ -0.7
HOXB3-210ENST00000489475 PP632Q6XCG6 107 aa10.6□□□□□ -0.71
HOXB3-210ENST00000489475 KRTAP23-1A1A580 65 aa10.58□□□□□ -0.72
HOXB3-210ENST00000489475 KRTAP10-12P60413 245 aa10.56□□□□□ -0.72
HOXB3-210ENST00000489475 LCE3AQ5TA76 89 aa10.48□□□□□ -0.73
HOXB3-210ENST00000489475 CRCT1Q9UGL9 99 aa10.4□□□□□ -0.74
HOXB3-210ENST00000489475 KRTAP15-1Q3LI76 137 aa10.37□□□□□ -0.75
HOXB3-210ENST00000489475 FCGBPQ9Y6R7 5405 aaPredicted RBP10.37□□□□□ -0.75
HOXB3-210ENST00000489475 KRTAP4-8A0A0G2JLE6 195 aa10.26□□□□□ -0.77
HOXB3-210ENST00000489475 KRTAP4-8Q9BYQ9 185 aa10.26□□□□□ -0.77
HOXB3-210ENST00000489475 KRTAP8-1Q8IUC2 63 aa10.25□□□□□ -0.77
HOXB3-210ENST00000489475 KMT2DO14686 5537 aa10.16□□□□□ -0.78
HOXB3-210ENST00000489475 NDUFAF8A1L188 74 aa10.14□□□□□ -0.79
HOXB3-210ENST00000489475 KRTAP12-3P60328 96 aa10.08□□□□□ -0.8
HOXB3-210ENST00000489475 KRTAP19-5Q3LI72 72 aa10.04□□□□□ -0.8
HOXB3-210ENST00000489475 KRTAP9-6A0A140TA67 174 aa9.95□□□□□ -0.82
HOXB3-210ENST00000489475 KRTAP19-7Q3SYF9 63 aa9.91□□□□□ -0.82
HOXB3-210ENST00000489475 MACF1Q9UPN3 7388 aaKnown RBP9.82□□□□□ -0.84
HOXB3-210ENST00000489475 MT1EP04732 61 aa9.74□□□□□ -0.85
HOXB3-210ENST00000489475 SPRR2FQ96RM1 72 aa9.63□□□□□ -0.87
HOXB3-210ENST00000489475 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.61□□□□□ -0.87
HOXB3-210ENST00000489475 MT1LQ93083 61 aa9.54□□□□□ -0.88
HOXB3-210ENST00000489475 SYNE2Q8WXH0 6885 aaKnown RBP9.52□□□□□ -0.89
HOXB3-210ENST00000489475 KRTAP5-9P26371 169 aa9.51□□□□□ -0.89
HOXB3-210ENST00000489475 LUZP6Q538Z0 58 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms