RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 A0A1B0GV90 55 aa6.68□□□□□ -1.34
CLDN11-207ENST00000486975 FAM240AA0A1B0GVK7 77 aa6.67□□□□□ -1.34
CLDN11-207ENST00000486975 MACF1Q9UPN3 7388 aaKnown RBP6.64□□□□□ -1.35
CLDN11-207ENST00000486975 C1orf64Q8NEQ6 169 aa6.63□□□□□ -1.35
CLDN11-207ENST00000486975 C5orf47Q569G3 176 aa6.62□□□□□ -1.35
CLDN11-207ENST00000486975 S4R3F8 94 aa6.62□□□□□ -1.35
CLDN11-207ENST00000486975 ATP5EP2Q5VTU8 51 aa6.6□□□□□ -1.35
CLDN11-207ENST00000486975 CSAG1Q6PB30 78 aa6.6□□□□□ -1.35
CLDN11-207ENST00000486975 LCA10Q71F78 164 aa6.57□□□□□ -1.36
CLDN11-207ENST00000486975 FAM236AA0A1B0GUQ0 79 aa6.56□□□□□ -1.36
CLDN11-207ENST00000486975 FAM236BA0A1B0GV22 79 aa6.56□□□□□ -1.36
CLDN11-207ENST00000486975 HIST1H4AP62805 103 aaKnown RBP6.55□□□□□ -1.36
CLDN11-207ENST00000486975 LINC00643Q86TS7 51 aa6.55□□□□□ -1.36
CLDN11-207ENST00000486975 CYP4F30PQ9H0H9 118 aa6.55□□□□□ -1.36
CLDN11-207ENST00000486975 SYNE2Q8WXH0 6885 aaKnown RBP6.54□□□□□ -1.36
CLDN11-207ENST00000486975 TRAV22A0A0B4J277 110 aa6.53□□□□□ -1.36
CLDN11-207ENST00000486975 SPRR2GQ9BYE4 73 aa6.52□□□□□ -1.37
CLDN11-207ENST00000486975 LOC101927531A0A1B0GV80 90 aa6.51□□□□□ -1.37
CLDN11-207ENST00000486975 J3QR89 54 aa6.5□□□□□ -1.37
CLDN11-207ENST00000486975 KRTAP19-8Q3LI54 63 aa6.49□□□□□ -1.37
CLDN11-207ENST00000486975 MT1BP07438 61 aa6.48□□□□□ -1.37
CLDN11-207ENST00000486975 KLKP1Q107X0 134 aa6.47□□□□□ -1.37
CLDN11-207ENST00000486975 KRTAP6-3Q3LI67 103 aa6.47□□□□□ -1.37
CLDN11-207ENST00000486975 Q5VV11 94 aa6.47□□□□□ -1.37
CLDN11-207ENST00000486975 A0A087WVE0 104 aa6.46□□□□□ -1.38
CLDN11-207ENST00000486975 UQCRQO14949 82 aa6.45□□□□□ -1.38
CLDN11-207ENST00000486975 ATOX1O00244 68 aa6.43□□□□□ -1.38
CLDN11-207ENST00000486975 A6NN06 94 aa6.41□□□□□ -1.38
CLDN11-207ENST00000486975 CRIPTQ9P021 101 aa6.41□□□□□ -1.38
CLDN11-207ENST00000486975 H0Y9P7 68 aa6.4□□□□□ -1.38
CLDN11-207ENST00000486975 H0YAA0 97 aa6.36□□□□□ -1.39
CLDN11-207ENST00000486975 IMUPQ9GZP8 106 aa6.36□□□□□ -1.39
CLDN11-207ENST00000486975 A8MUN3 132 aa6.35□□□□□ -1.39
CLDN11-207ENST00000486975 KRTAP10-5P60370 271 aa6.35□□□□□ -1.39
CLDN11-207ENST00000486975 NDUFC1O43677 76 aa6.34□□□□□ -1.39
CLDN11-207ENST00000486975 OCR1Q9BZK8 76 aa6.34□□□□□ -1.39
CLDN11-207ENST00000486975 K7ERU9 68 aa6.32□□□□□ -1.4
CLDN11-207ENST00000486975 KRTAP10-7P60409 375 aaPredicted RBP6.31□□□□□ -1.4
CLDN11-207ENST00000486975 KRTAP2-2Q9BYT5 123 aa6.31□□□□□ -1.4
CLDN11-207ENST00000486975 MP68P56378 58 aa6.3□□□□□ -1.4
CLDN11-207ENST00000486975 LINC00208Q96KT6 92 aa6.3□□□□□ -1.4
CLDN11-207ENST00000486975 SCGB1A1P11684 91 aa6.29□□□□□ -1.4
CLDN11-207ENST00000486975 MT-ATP8P03928 68 aa6.24□□□□□ -1.41
CLDN11-207ENST00000486975 H3BPC8 53 aa6.23□□□□□ -1.41
CLDN11-207ENST00000486975 KRTAP5-11Q6L8G4 156 aa6.22□□□□□ -1.41
CLDN11-207ENST00000486975 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.22□□□□□ -1.41
CLDN11-207ENST00000486975 ADM2Q7Z4H4 148 aa6.21□□□□□ -1.42
CLDN11-207ENST00000486975 NEBP20929 6669 aa6.2□□□□□ -1.42
CLDN11-207ENST00000486975 KRTAP5-9P26371 169 aa6.17□□□□□ -1.42
CLDN11-207ENST00000486975 SMIM20Q8N5G0 67 aa6.15□□□□□ -1.42
CLDN11-207ENST00000486975 DMAC1Q96GE9 116 aa6.14□□□□□ -1.43
CLDN11-207ENST00000486975 MUC12Q9UKN1 5478 aa6.13□□□□□ -1.43
CLDN11-207ENST00000486975 TRAV7A0A075B6U4 112 aa6.12□□□□□ -1.43
CLDN11-207ENST00000486975 C20orf197Q8N268 126 aa6.1□□□□□ -1.43
CLDN11-207ENST00000486975 PRO2289Q9P1D8 64 aa6.1□□□□□ -1.43
CLDN11-207ENST00000486975 P0C880 135 aa6.07□□□□□ -1.44
CLDN11-207ENST00000486975 R4GN34 69 aa6.07□□□□□ -1.44
CLDN11-207ENST00000486975 MT1XP80297 61 aa6.06□□□□□ -1.44
CLDN11-207ENST00000486975 KMT2DO14686 5537 aa6.06□□□□□ -1.44
CLDN11-207ENST00000486975 PLAC4Q8WY50 150 aa6.05□□□□□ -1.44
CLDN11-207ENST00000486975 M0QZ58 72 aa6.01□□□□□ -1.45
CLDN11-207ENST00000486975 ACYP2P14621 99 aa5.98□□□□□ -1.45
CLDN11-207ENST00000486975 KRTAP20-1Q3LI63 56 aa5.98□□□□□ -1.45
CLDN11-207ENST00000486975 SERP2Q8N6R1 65 aa5.98□□□□□ -1.45
CLDN11-207ENST00000486975 SNURFQ9Y675 71 aa5.98□□□□□ -1.45
CLDN11-207ENST00000486975 KRTAP12-2P59991 146 aa5.97□□□□□ -1.45
CLDN11-207ENST00000486975 LCE1EQ5T753 118 aa5.97□□□□□ -1.45
CLDN11-207ENST00000486975 MDN1Q9NU22 5596 aa5.97□□□□□ -1.45
CLDN11-207ENST00000486975 SPTSSBQ8NFR3 76 aa5.91□□□□□ -1.46
CLDN11-207ENST00000486975 SPRR2FQ96RM1 72 aa5.91□□□□□ -1.46
CLDN11-207ENST00000486975 LINC01554Q52M75 96 aa5.9□□□□□ -1.46
CLDN11-207ENST00000486975 KRTAP8-1Q8IUC2 63 aa5.89□□□□□ -1.47
CLDN11-207ENST00000486975 SPANXA2-OT1Q8N9U9 137 aa5.89□□□□□ -1.47
CLDN11-207ENST00000486975 CHKB-CPT1BH3BT56 60 aa5.86□□□□□ -1.47
CLDN11-207ENST00000486975 SPRR2EP22531 72 aa5.84□□□□□ -1.47
CLDN11-207ENST00000486975 SPRR2BP35325 72 aa5.84□□□□□ -1.47
CLDN11-207ENST00000486975 SPRR2AP35326 72 aa5.84□□□□□ -1.47
CLDN11-207ENST00000486975 KRTAP2-3P0C7H8 128 aa5.83□□□□□ -1.48
CLDN11-207ENST00000486975 COX7CP15954 63 aa5.83□□□□□ -1.48
CLDN11-207ENST00000486975 KRTAP2-4Q9BYR9 128 aa5.83□□□□□ -1.48
CLDN11-207ENST00000486975 KRTAP10-12P60413 245 aa5.77□□□□□ -1.49
CLDN11-207ENST00000486975 MT3P25713 68 aa5.76□□□□□ -1.49
CLDN11-207ENST00000486975 H7BZZ5 65 aa5.71□□□□□ -1.5
CLDN11-207ENST00000486975 ANAPC13Q9BS18 74 aa5.71□□□□□ -1.5
CLDN11-207ENST00000486975 COA5Q86WW8 74 aa5.7□□□□□ -1.5
CLDN11-207ENST00000486975 CYSTM1Q9H1C7 97 aa5.7□□□□□ -1.5
CLDN11-207ENST00000486975 SPRR2DP22532 72 aa5.65□□□□□ -1.5
CLDN11-207ENST00000486975 KRTAP13-4Q3LI77 160 aa5.65□□□□□ -1.5
CLDN11-207ENST00000486975 KRTAP2-1Q9BYU5 128 aa5.64□□□□□ -1.51
CLDN11-207ENST00000486975 CCDC179H3BU77 68 aa5.58□□□□□ -1.52
CLDN11-207ENST00000486975 SEC61GP60059 68 aa5.58□□□□□ -1.52
CLDN11-207ENST00000486975 CAMK2N1Q7Z7J9 78 aa5.57□□□□□ -1.52
CLDN11-207ENST00000486975 SERP1Q9Y6X1 66 aa5.56□□□□□ -1.52
CLDN11-207ENST00000486975 ATP5EP56381 51 aaPredicted RBP5.48□□□□□ -1.53
CLDN11-207ENST00000486975 A0A1B0GU33 70 aa5.45□□□□□ -1.54
CLDN11-207ENST00000486975 A0A0D9SG42 100 aa5.44□□□□□ -1.54
CLDN11-207ENST00000486975 A0A1B0GU69 56 aa5.43□□□□□ -1.54
CLDN11-207ENST00000486975 KRTAP19-7Q3SYF9 63 aa5.43□□□□□ -1.54
CLDN11-207ENST00000486975 SPATA8Q6RVD6 105 aa5.42□□□□□ -1.54
CLDN11-207ENST00000486975 KRTAP5-1Q6L8H4 278 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms