RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 KRTAP3-3Q9BYR6 98 aa8.47□□□□□ -1.05
COL27A1-205ENST00000485397 KRTAP20-1Q3LI63 56 aa8.45□□□□□ -1.06
COL27A1-205ENST00000485397 KRTAP5-9P26371 169 aa8.43□□□□□ -1.06
COL27A1-205ENST00000485397 LINC00643Q86TS7 51 aa8.43□□□□□ -1.06
COL27A1-205ENST00000485397 TP53AIP1Q9HCN2 124 aa8.43□□□□□ -1.06
COL27A1-205ENST00000485397 K7ERU9 68 aa8.42□□□□□ -1.06
COL27A1-205ENST00000485397 A0A087WVE0 104 aa8.39□□□□□ -1.07
COL27A1-205ENST00000485397 KMT2DO14686 5537 aa8.38□□□□□ -1.07
COL27A1-205ENST00000485397 IMUPQ9GZP8 106 aa8.36□□□□□ -1.07
COL27A1-205ENST00000485397 CYP4F30PQ9H0H9 118 aa8.36□□□□□ -1.07
COL27A1-205ENST00000485397 HIST1H4AP62805 103 aaKnown RBP8.34□□□□□ -1.07
COL27A1-205ENST00000485397 CRIPTQ9P021 101 aa8.34□□□□□ -1.07
COL27A1-205ENST00000485397 MDN1Q9NU22 5596 aa8.34□□□□□ -1.07
COL27A1-205ENST00000485397 TRAV22A0A0B4J277 110 aa8.23□□□□□ -1.09
COL27A1-205ENST00000485397 LOC101927531A0A1B0GV80 90 aa8.23□□□□□ -1.09
COL27A1-205ENST00000485397 H0YAA0 97 aa8.17□□□□□ -1.1
COL27A1-205ENST00000485397 NDUFC1O43677 76 aa8.17□□□□□ -1.1
COL27A1-205ENST00000485397 KRTAP2-3P0C7H8 128 aa8.15□□□□□ -1.1
COL27A1-205ENST00000485397 KRTAP2-4Q9BYR9 128 aa8.15□□□□□ -1.1
COL27A1-205ENST00000485397 UQCRQO14949 82 aa8.13□□□□□ -1.11
COL27A1-205ENST00000485397 ADM2Q7Z4H4 148 aa8.13□□□□□ -1.11
COL27A1-205ENST00000485397 SPRR2FQ96RM1 72 aa8.13□□□□□ -1.11
COL27A1-205ENST00000485397 SCGB1A1P11684 91 aa8.12□□□□□ -1.11
COL27A1-205ENST00000485397 A8MUN3 132 aa8.1□□□□□ -1.11
COL27A1-205ENST00000485397 ATOX1O00244 68 aa8.09□□□□□ -1.11
COL27A1-205ENST00000485397 SPRR2EP22531 72 aa8.09□□□□□ -1.11
COL27A1-205ENST00000485397 SPRR2BP35325 72 aa8.09□□□□□ -1.11
COL27A1-205ENST00000485397 SPRR2AP35326 72 aa8.09□□□□□ -1.11
COL27A1-205ENST00000485397 MT1XP80297 61 aa8.09□□□□□ -1.11
COL27A1-205ENST00000485397 H0Y9P7 68 aa8.08□□□□□ -1.12
COL27A1-205ENST00000485397 MT-ATP8P03928 68 aa8.08□□□□□ -1.12
COL27A1-205ENST00000485397 PRO2289Q9P1D8 64 aa8.08□□□□□ -1.12
COL27A1-205ENST00000485397 MP68P56378 58 aa8.03□□□□□ -1.12
COL27A1-205ENST00000485397 SMIM20Q8N5G0 67 aa8.02□□□□□ -1.13
COL27A1-205ENST00000485397 PLAC4Q8WY50 150 aa8.01□□□□□ -1.13
COL27A1-205ENST00000485397 OCR1Q9BZK8 76 aa8.01□□□□□ -1.13
COL27A1-205ENST00000485397 KRTAP8-1Q8IUC2 63 aa8□□□□□ -1.13
COL27A1-205ENST00000485397 H3BPC8 53 aa7.96□□□□□ -1.14
COL27A1-205ENST00000485397 LCE1AQ5T7P2 110 aa7.94□□□□□ -1.14
COL27A1-205ENST00000485397 KRTAP12-2P59991 146 aa7.93□□□□□ -1.14
COL27A1-205ENST00000485397 LINC00208Q96KT6 92 aa7.93□□□□□ -1.14
COL27A1-205ENST00000485397 P0C880 135 aa7.91□□□□□ -1.14
COL27A1-205ENST00000485397 R4GN34 69 aa7.91□□□□□ -1.14
COL27A1-205ENST00000485397 TRAV7A0A075B6U4 112 aa7.89□□□□□ -1.15
COL27A1-205ENST00000485397 KRTAP2-2Q9BYT5 123 aa7.88□□□□□ -1.15
COL27A1-205ENST00000485397 KRTAP2-1Q9BYU5 128 aa7.88□□□□□ -1.15
COL27A1-205ENST00000485397 KRTAP4-8A0A0G2JLE6 195 aa7.87□□□□□ -1.15
COL27A1-205ENST00000485397 KRTAP4-8Q9BYQ9 185 aa7.87□□□□□ -1.15
COL27A1-205ENST00000485397 M0QZ58 72 aa7.85□□□□□ -1.15
COL27A1-205ENST00000485397 C20orf197Q8N268 126 aa7.82□□□□□ -1.16
COL27A1-205ENST00000485397 SPRR2DP22532 72 aa7.81□□□□□ -1.16
COL27A1-205ENST00000485397 SERP2Q8N6R1 65 aa7.79□□□□□ -1.16
COL27A1-205ENST00000485397 KRTAP3-2Q9BYR7 98 aa7.79□□□□□ -1.16
COL27A1-205ENST00000485397 LINC01554Q52M75 96 aa7.78□□□□□ -1.16
COL27A1-205ENST00000485397 KRTAP10-7P60409 375 aaPredicted RBP7.74□□□□□ -1.17
COL27A1-205ENST00000485397 DMAC1Q96GE9 116 aa7.71□□□□□ -1.18
COL27A1-205ENST00000485397 KRTAP10-12P60413 245 aa7.67□□□□□ -1.18
COL27A1-205ENST00000485397 COX7CP15954 63 aa7.65□□□□□ -1.18
COL27A1-205ENST00000485397 SNURFQ9Y675 71 aa7.65□□□□□ -1.18
COL27A1-205ENST00000485397 LCE3BQ5TA77 95 aa7.63□□□□□ -1.19
COL27A1-205ENST00000485397 ANAPC13Q9BS18 74 aa7.63□□□□□ -1.19
COL27A1-205ENST00000485397 SPANXA2-OT1Q8N9U9 137 aa7.57□□□□□ -1.2
COL27A1-205ENST00000485397 ACYP2P14621 99 aa7.56□□□□□ -1.2
COL27A1-205ENST00000485397 SPTSSBQ8NFR3 76 aa7.48□□□□□ -1.21
COL27A1-205ENST00000485397 CHKB-CPT1BH3BT56 60 aa7.47□□□□□ -1.21
COL27A1-205ENST00000485397 H7BZZ5 65 aa7.4□□□□□ -1.22
COL27A1-205ENST00000485397 CCDC179H3BU77 68 aa7.36□□□□□ -1.23
COL27A1-205ENST00000485397 ATP5EP56381 51 aaPredicted RBP7.32□□□□□ -1.24
COL27A1-205ENST00000485397 CYSTM1Q9H1C7 97 aa7.31□□□□□ -1.24
COL27A1-205ENST00000485397 COA5Q86WW8 74 aa7.29□□□□□ -1.24
COL27A1-205ENST00000485397 GPR98Q8WXG9 6306 aa7.29□□□□□ -1.24
COL27A1-205ENST00000485397 KRTAP13-4Q3LI77 160 aa7.28□□□□□ -1.24
COL27A1-205ENST00000485397 DSTQ03001 7570 aaKnown RBP7.26□□□□□ -1.25
COL27A1-205ENST00000485397 KRTAP19-7Q3SYF9 63 aa7.25□□□□□ -1.25
COL27A1-205ENST00000485397 TMEM258P61165 79 aa7.24□□□□□ -1.25
COL27A1-205ENST00000485397 LCE5AQ5TCM9 118 aa7.24□□□□□ -1.25
COL27A1-205ENST00000485397 CAMK2N1Q7Z7J9 78 aa7.24□□□□□ -1.25
COL27A1-205ENST00000485397 KRTAP4-9Q9BYQ8 210 aa7.21□□□□□ -1.26
COL27A1-205ENST00000485397 MT1EP04732 61 aa7.19□□□□□ -1.26
COL27A1-205ENST00000485397 KRTAP19-3Q7Z4W3 81 aa7.19□□□□□ -1.26
COL27A1-205ENST00000485397 SEC61GP60059 68 aa7.16□□□□□ -1.26
COL27A1-205ENST00000485397 SERP1Q9Y6X1 66 aa7.1□□□□□ -1.27
COL27A1-205ENST00000485397 PCP4P48539 62 aa7.04□□□□□ -1.28
COL27A1-205ENST00000485397 A0A0D9SG42 100 aa7.02□□□□□ -1.29
COL27A1-205ENST00000485397 KRTAP19-5Q3LI72 72 aa6.99□□□□□ -1.29
COL27A1-205ENST00000485397 A0A1B0GU69 56 aa6.98□□□□□ -1.29
COL27A1-205ENST00000485397 LCE1DQ5T752 114 aa6.98□□□□□ -1.29
COL27A1-205ENST00000485397 MT1GP13640 62 aa6.97□□□□□ -1.29
COL27A1-205ENST00000485397 PRR15LQ9BU68 103 aa6.97□□□□□ -1.29
COL27A1-205ENST00000485397 SPATA8Q6RVD6 105 aa6.93□□□□□ -1.3
COL27A1-205ENST00000485397 SPINT4Q6UDR6 99 aa6.93□□□□□ -1.3
COL27A1-205ENST00000485397 A0A1B0GU33 70 aa6.89□□□□□ -1.31
COL27A1-205ENST00000485397 PP632Q6XCG6 107 aa6.89□□□□□ -1.31
COL27A1-205ENST00000485397 MT4P47944 62 aa6.88□□□□□ -1.31
COL27A1-205ENST00000485397 LCE4AQ5TA78 99 aa6.87□□□□□ -1.31
COL27A1-205ENST00000485397 MT1MQ8N339 61 aa6.87□□□□□ -1.31
COL27A1-205ENST00000485397 KRTAP12-1P59990 96 aa6.85□□□□□ -1.31
COL27A1-205ENST00000485397 LINC01558Q9Y6Z2 57 aa6.85□□□□□ -1.31
COL27A1-205ENST00000485397 V9GYY9 64 aa6.84□□□□□ -1.31
COL27A1-205ENST00000485397 MT1LQ93083 61 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms