RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 KRTAP20-1Q3LI63 56 aa4.98□□□□□ -1.61
SCFD1-206ENST00000484733 TRAV22A0A0B4J277 110 aa4.97□□□□□ -1.61
SCFD1-206ENST00000484733 F8W1H4 67 aa4.97□□□□□ -1.61
SCFD1-206ENST00000484733 GTF2H5Q6ZYL4 71 aa4.97□□□□□ -1.61
SCFD1-206ENST00000484733 H0YAA0 97 aa4.96□□□□□ -1.61
SCFD1-206ENST00000484733 ETDBQ3ZM63 59 aa4.94□□□□□ -1.62
SCFD1-206ENST00000484733 NDUFC1O43677 76 aa4.92□□□□□ -1.62
SCFD1-206ENST00000484733 UQCRQO14949 82 aa4.91□□□□□ -1.62
SCFD1-206ENST00000484733 ATOX1O00244 68 aa4.9□□□□□ -1.63
SCFD1-206ENST00000484733 ACYP1P07311 99 aa4.9□□□□□ -1.63
SCFD1-206ENST00000484733 ATP5EP2Q5VTU8 51 aa4.88□□□□□ -1.63
SCFD1-206ENST00000484733 A8MUN3 132 aa4.88□□□□□ -1.63
SCFD1-206ENST00000484733 H0Y9P7 68 aa4.87□□□□□ -1.63
SCFD1-206ENST00000484733 KMT2DO14686 5537 aa4.86□□□□□ -1.63
SCFD1-206ENST00000484733 FAM240AA0A1B0GVK7 77 aa4.85□□□□□ -1.63
SCFD1-206ENST00000484733 ADM2Q7Z4H4 148 aa4.85□□□□□ -1.63
SCFD1-206ENST00000484733 PRO2289Q9P1D8 64 aa4.85□□□□□ -1.63
SCFD1-206ENST00000484733 KRTAP2-3P0C7H8 128 aa4.84□□□□□ -1.64
SCFD1-206ENST00000484733 KRTAP2-4Q9BYR9 128 aa4.84□□□□□ -1.64
SCFD1-206ENST00000484733 HIST1H4AP62805 103 aaKnown RBP4.82□□□□□ -1.64
SCFD1-206ENST00000484733 MT1XP80297 61 aa4.82□□□□□ -1.64
SCFD1-206ENST00000484733 MDN1Q9NU22 5596 aa4.82□□□□□ -1.64
SCFD1-206ENST00000484733 PLAC4Q8WY50 150 aa4.79□□□□□ -1.64
SCFD1-206ENST00000484733 SPRR2FQ96RM1 72 aa4.79□□□□□ -1.64
SCFD1-206ENST00000484733 SPRR2EP22531 72 aa4.77□□□□□ -1.65
SCFD1-206ENST00000484733 SPRR2BP35325 72 aa4.77□□□□□ -1.65
SCFD1-206ENST00000484733 SPRR2AP35326 72 aa4.77□□□□□ -1.65
SCFD1-206ENST00000484733 KRTAP12-2P59991 146 aa4.77□□□□□ -1.65
SCFD1-206ENST00000484733 LINC00208Q96KT6 92 aa4.77□□□□□ -1.65
SCFD1-206ENST00000484733 LINC00643Q86TS7 51 aa4.75□□□□□ -1.65
SCFD1-206ENST00000484733 KRTAP8-1Q8IUC2 63 aa4.74□□□□□ -1.65
SCFD1-206ENST00000484733 MP68P56378 58 aa4.74□□□□□ -1.65
SCFD1-206ENST00000484733 C20orf197Q8N268 126 aa4.74□□□□□ -1.65
SCFD1-206ENST00000484733 PCP4L1A6NKN8 68 aa4.73□□□□□ -1.65
SCFD1-206ENST00000484733 OCR1Q9BZK8 76 aa4.73□□□□□ -1.65
SCFD1-206ENST00000484733 R4GN34 69 aa4.73□□□□□ -1.65
SCFD1-206ENST00000484733 P0C880 135 aa4.71□□□□□ -1.66
SCFD1-206ENST00000484733 LCE1AQ5T7P2 110 aa4.71□□□□□ -1.66
SCFD1-206ENST00000484733 H3BPC8 53 aa4.69□□□□□ -1.66
SCFD1-206ENST00000484733 M0QZ58 72 aa4.68□□□□□ -1.66
SCFD1-206ENST00000484733 DMAC1Q96GE9 116 aa4.67□□□□□ -1.66
SCFD1-206ENST00000484733 KRTAP2-2Q9BYT5 123 aa4.67□□□□□ -1.66
SCFD1-206ENST00000484733 KRTAP2-1Q9BYU5 128 aa4.67□□□□□ -1.66
SCFD1-206ENST00000484733 KRTAP4-8A0A0G2JLE6 195 aa4.63□□□□□ -1.67
SCFD1-206ENST00000484733 KRTAP4-8Q9BYQ9 185 aa4.63□□□□□ -1.67
SCFD1-206ENST00000484733 SPRR2DP22532 72 aa4.61□□□□□ -1.67
SCFD1-206ENST00000484733 KRTAP10-12P60413 245 aa4.6□□□□□ -1.67
SCFD1-206ENST00000484733 LINC01554Q52M75 96 aa4.59□□□□□ -1.67
SCFD1-206ENST00000484733 TRAV7A0A075B6U4 112 aa4.58□□□□□ -1.68
SCFD1-206ENST00000484733 KRTAP10-7P60409 375 aaPredicted RBP4.58□□□□□ -1.68
SCFD1-206ENST00000484733 SCGB1A1P11684 91 aa4.54□□□□□ -1.68
SCFD1-206ENST00000484733 ACYP2P14621 99 aa4.54□□□□□ -1.68
SCFD1-206ENST00000484733 SPTSSBQ8NFR3 76 aa4.52□□□□□ -1.69
SCFD1-206ENST00000484733 LCE3BQ5TA77 95 aa4.51□□□□□ -1.69
SCFD1-206ENST00000484733 J3QR89 54 aa4.5□□□□□ -1.69
SCFD1-206ENST00000484733 MT-ATP8P03928 68 aa4.5□□□□□ -1.69
SCFD1-206ENST00000484733 A0A1B0GV90 55 aa4.49□□□□□ -1.69
SCFD1-206ENST00000484733 SMIM20Q8N5G0 67 aa4.43□□□□□ -1.7
SCFD1-206ENST00000484733 CHKB-CPT1BH3BT56 60 aa4.41□□□□□ -1.7
SCFD1-206ENST00000484733 KRTAP13-4Q3LI77 160 aa4.35□□□□□ -1.71
SCFD1-206ENST00000484733 SPANXA2-OT1Q8N9U9 137 aa4.34□□□□□ -1.72
SCFD1-206ENST00000484733 LCE5AQ5TCM9 118 aa4.32□□□□□ -1.72
SCFD1-206ENST00000484733 CAMK2N1Q7Z7J9 78 aa4.32□□□□□ -1.72
SCFD1-206ENST00000484733 KRTAP19-7Q3SYF9 63 aa4.31□□□□□ -1.72
SCFD1-206ENST00000484733 SNURFQ9Y675 71 aa4.3□□□□□ -1.72
SCFD1-206ENST00000484733 MT1EP04732 61 aa4.29□□□□□ -1.72
SCFD1-206ENST00000484733 KRTAP19-3Q7Z4W3 81 aa4.28□□□□□ -1.72
SCFD1-206ENST00000484733 K7ERU9 68 aa4.25□□□□□ -1.73
SCFD1-206ENST00000484733 SERP2Q8N6R1 65 aa4.2□□□□□ -1.74
SCFD1-206ENST00000484733 GPR98Q8WXG9 6306 aa4.2□□□□□ -1.74
SCFD1-206ENST00000484733 KRTAP4-9Q9BYQ8 210 aa4.2□□□□□ -1.74
SCFD1-206ENST00000484733 COA5Q86WW8 74 aa4.19□□□□□ -1.74
SCFD1-206ENST00000484733 MT1GP13640 62 aa4.18□□□□□ -1.74
SCFD1-206ENST00000484733 SEC61GP60059 68 aa4.18□□□□□ -1.74
SCFD1-206ENST00000484733 SERP1Q9Y6X1 66 aa4.18□□□□□ -1.74
SCFD1-206ENST00000484733 A0A0D9SG42 100 aa4.17□□□□□ -1.74
SCFD1-206ENST00000484733 CYSTM1Q9H1C7 97 aa4.17□□□□□ -1.74
SCFD1-206ENST00000484733 KRTAP19-5Q3LI72 72 aa4.15□□□□□ -1.74
SCFD1-206ENST00000484733 DSTQ03001 7570 aaKnown RBP4.15□□□□□ -1.75
SCFD1-206ENST00000484733 SPATA8Q6RVD6 105 aa4.13□□□□□ -1.75
SCFD1-206ENST00000484733 SPINT4Q6UDR6 99 aa4.13□□□□□ -1.75
SCFD1-206ENST00000484733 PP632Q6XCG6 107 aa4.13□□□□□ -1.75
SCFD1-206ENST00000484733 A0A1B0GU33 70 aa4.12□□□□□ -1.75
SCFD1-206ENST00000484733 KRTAP12-1P59990 96 aa4.12□□□□□ -1.75
SCFD1-206ENST00000484733 LCE4AQ5TA78 99 aa4.12□□□□□ -1.75
SCFD1-206ENST00000484733 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
SCFD1-206ENST00000484733 MT1MQ8N339 61 aa4.09□□□□□ -1.75
SCFD1-206ENST00000484733 MT1LQ93083 61 aa4.07□□□□□ -1.76
SCFD1-206ENST00000484733 LOC100996750A0A140TA64 210 aa4.04□□□□□ -1.76
SCFD1-206ENST00000484733 KRTAP4-6Q9BYQ5 205 aa4.04□□□□□ -1.76
SCFD1-206ENST00000484733 SMIM26A0A096LP01 95 aa4.03□□□□□ -1.76
SCFD1-206ENST00000484733 COX7CP15954 63 aa4.03□□□□□ -1.77
SCFD1-206ENST00000484733 MT4P47944 62 aa4.02□□□□□ -1.77
SCFD1-206ENST00000484733 KRTAP5-4Q6L8H1 288 aa4.01□□□□□ -1.77
SCFD1-206ENST00000484733 H7BZZ5 65 aa4□□□□□ -1.77
SCFD1-206ENST00000484733 LCE3AQ5TA76 89 aa3.99□□□□□ -1.77
SCFD1-206ENST00000484733 HMCN1Q96RW7 5635 aa3.98□□□□□ -1.77
SCFD1-206ENST00000484733 H3BS24 57 aa3.98□□□□□ -1.77
SCFD1-206ENST00000484733 C10orf95Q9H7T3 257 aa3.98□□□□□ -1.77
SCFD1-206ENST00000484733 A0A1B0GU69 56 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms