RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 TRAV7A0A075B6U4 112 aa8.9□□□□□ -0.98
NDUFA3-213ENST00000484103 CYP4F30PQ9H0H9 118 aa8.88□□□□□ -0.99
NDUFA3-213ENST00000484103 MP68P56378 58 aa8.87□□□□□ -0.99
NDUFA3-213ENST00000484103 H3BPC8 53 aa8.85□□□□□ -0.99
NDUFA3-213ENST00000484103 C1orf64Q8NEQ6 169 aa8.84□□□□□ -0.99
NDUFA3-213ENST00000484103 LINC00208Q96KT6 92 aa8.84□□□□□ -0.99
NDUFA3-213ENST00000484103 S4R3F8 94 aa8.81□□□□□ -1
NDUFA3-213ENST00000484103 KRTAP3-1Q9BYR8 98 aa8.8□□□□□ -1
NDUFA3-213ENST00000484103 SERP2Q8N6R1 65 aa8.79□□□□□ -1
NDUFA3-213ENST00000484103 LCA10Q71F78 164 aa8.75□□□□□ -1.01
NDUFA3-213ENST00000484103 KLKP1Q107X0 134 aa8.74□□□□□ -1.01
NDUFA3-213ENST00000484103 CSAG1Q6PB30 78 aa8.71□□□□□ -1.02
NDUFA3-213ENST00000484103 KRTAP6-3Q3LI67 103 aa8.69□□□□□ -1.02
NDUFA3-213ENST00000484103 COX7CP15954 63 aa8.68□□□□□ -1.02
NDUFA3-213ENST00000484103 A6NN06 94 aa8.66□□□□□ -1.02
NDUFA3-213ENST00000484103 Q5VV11 94 aa8.65□□□□□ -1.02
NDUFA3-213ENST00000484103 C20orf197Q8N268 126 aa8.65□□□□□ -1.02
NDUFA3-213ENST00000484103 MT1BP07438 61 aa8.64□□□□□ -1.03
NDUFA3-213ENST00000484103 SNURFQ9Y675 71 aa8.64□□□□□ -1.03
NDUFA3-213ENST00000484103 ANAPC13Q9BS18 74 aa8.63□□□□□ -1.03
NDUFA3-213ENST00000484103 SPRR2GQ9BYE4 73 aa8.57□□□□□ -1.04
NDUFA3-213ENST00000484103 A8MUN3 132 aa8.56□□□□□ -1.04
NDUFA3-213ENST00000484103 KRTAP3-3Q9BYR6 98 aa8.55□□□□□ -1.04
NDUFA3-213ENST00000484103 KRTAP19-8Q3LI54 63 aa8.54□□□□□ -1.04
NDUFA3-213ENST00000484103 NEBP20929 6669 aa8.53□□□□□ -1.04
NDUFA3-213ENST00000484103 DMAC1Q96GE9 116 aa8.52□□□□□ -1.05
NDUFA3-213ENST00000484103 MUC12Q9UKN1 5478 aa8.49□□□□□ -1.05
NDUFA3-213ENST00000484103 CYSTM1Q9H1C7 97 aa8.49□□□□□ -1.05
NDUFA3-213ENST00000484103 SPANXA2-OT1Q8N9U9 137 aa8.48□□□□□ -1.05
NDUFA3-213ENST00000484103 CCDC179H3BU77 68 aa8.47□□□□□ -1.05
NDUFA3-213ENST00000484103 NDUFC1O43677 76 aa8.46□□□□□ -1.06
NDUFA3-213ENST00000484103 KRTAP10-5P60370 271 aa8.46□□□□□ -1.06
NDUFA3-213ENST00000484103 H7BZZ5 65 aa8.44□□□□□ -1.06
NDUFA3-213ENST00000484103 ACYP2P14621 99 aa8.37□□□□□ -1.07
NDUFA3-213ENST00000484103 CRIPTQ9P021 101 aa8.34□□□□□ -1.07
NDUFA3-213ENST00000484103 ADM2Q7Z4H4 148 aa8.29□□□□□ -1.08
NDUFA3-213ENST00000484103 MDN1Q9NU22 5596 aa8.26□□□□□ -1.09
NDUFA3-213ENST00000484103 KMT2DO14686 5537 aa8.23□□□□□ -1.09
NDUFA3-213ENST00000484103 H0YAA0 97 aa8.22□□□□□ -1.09
NDUFA3-213ENST00000484103 KRTAP5-9P26371 169 aa8.2□□□□□ -1.1
NDUFA3-213ENST00000484103 ATP5EP56381 51 aaPredicted RBP8.2□□□□□ -1.1
NDUFA3-213ENST00000484103 KRTAP20-1Q3LI63 56 aa8.2□□□□□ -1.1
NDUFA3-213ENST00000484103 COA5Q86WW8 74 aa8.2□□□□□ -1.1
NDUFA3-213ENST00000484103 CHKB-CPT1BH3BT56 60 aa8.19□□□□□ -1.1
NDUFA3-213ENST00000484103 TMEM258P61165 79 aa8.18□□□□□ -1.1
NDUFA3-213ENST00000484103 PCP4P48539 62 aa8.15□□□□□ -1.1
NDUFA3-213ENST00000484103 SPTSSBQ8NFR3 76 aa8.15□□□□□ -1.1
NDUFA3-213ENST00000484103 PLAC4Q8WY50 150 aa8.08□□□□□ -1.12
NDUFA3-213ENST00000484103 PRO2289Q9P1D8 64 aa8.08□□□□□ -1.12
NDUFA3-213ENST00000484103 MT1XP80297 61 aa8.07□□□□□ -1.12
NDUFA3-213ENST00000484103 P0C880 135 aa8.06□□□□□ -1.12
NDUFA3-213ENST00000484103 SPRR2FQ96RM1 72 aa8.06□□□□□ -1.12
NDUFA3-213ENST00000484103 R4GN34 69 aa8.06□□□□□ -1.12
NDUFA3-213ENST00000484103 M0QZ58 72 aa8.03□□□□□ -1.12
NDUFA3-213ENST00000484103 KRTAP3-2Q9BYR7 98 aa8.02□□□□□ -1.13
NDUFA3-213ENST00000484103 LINC01554Q52M75 96 aa8□□□□□ -1.13
NDUFA3-213ENST00000484103 SPRR2EP22531 72 aa7.98□□□□□ -1.13
NDUFA3-213ENST00000484103 SPRR2BP35325 72 aa7.98□□□□□ -1.13
NDUFA3-213ENST00000484103 SPRR2AP35326 72 aa7.98□□□□□ -1.13
NDUFA3-213ENST00000484103 KRTAP8-1Q8IUC2 63 aa7.96□□□□□ -1.14
NDUFA3-213ENST00000484103 SERP1Q9Y6X1 66 aa7.92□□□□□ -1.14
NDUFA3-213ENST00000484103 KRTAP2-3P0C7H8 128 aa7.89□□□□□ -1.15
NDUFA3-213ENST00000484103 KRTAP2-4Q9BYR9 128 aa7.89□□□□□ -1.15
NDUFA3-213ENST00000484103 KRTAP4-8A0A0G2JLE6 195 aa7.84□□□□□ -1.15
NDUFA3-213ENST00000484103 KRTAP4-8Q9BYQ9 185 aa7.84□□□□□ -1.15
NDUFA3-213ENST00000484103 KRTAP12-2P59991 146 aa7.82□□□□□ -1.16
NDUFA3-213ENST00000484103 SEC61GP60059 68 aa7.79□□□□□ -1.16
NDUFA3-213ENST00000484103 LCE1AQ5T7P2 110 aa7.78□□□□□ -1.16
NDUFA3-213ENST00000484103 LINC01558Q9Y6Z2 57 aa7.76□□□□□ -1.17
NDUFA3-213ENST00000484103 KRTAP10-7P60409 375 aaPredicted RBP7.75□□□□□ -1.17
NDUFA3-213ENST00000484103 A0A1B0GU69 56 aa7.73□□□□□ -1.17
NDUFA3-213ENST00000484103 SPRR2DP22532 72 aa7.71□□□□□ -1.18
NDUFA3-213ENST00000484103 RPS28P62857 69 aaKnown RBP7.7□□□□□ -1.18
NDUFA3-213ENST00000484103 KRTAP13-4Q3LI77 160 aa7.67□□□□□ -1.18
NDUFA3-213ENST00000484103 PRR15LQ9BU68 103 aa7.65□□□□□ -1.18
NDUFA3-213ENST00000484103 A0A1B0GU33 70 aa7.64□□□□□ -1.19
NDUFA3-213ENST00000484103 SMIM26A0A096LP01 95 aa7.63□□□□□ -1.19
NDUFA3-213ENST00000484103 KRTAP2-2Q9BYT5 123 aa7.63□□□□□ -1.19
NDUFA3-213ENST00000484103 KRTAP2-1Q9BYU5 128 aa7.63□□□□□ -1.19
NDUFA3-213ENST00000484103 KRTAP10-12P60413 245 aa7.61□□□□□ -1.19
NDUFA3-213ENST00000484103 Q1T7F1 81 aa7.61□□□□□ -1.19
NDUFA3-213ENST00000484103 V9GYY9 64 aa7.61□□□□□ -1.19
NDUFA3-213ENST00000484103 SPATA8Q6RVD6 105 aa7.54□□□□□ -1.2
NDUFA3-213ENST00000484103 LCE3BQ5TA77 95 aa7.49□□□□□ -1.21
NDUFA3-213ENST00000484103 PSPHP1O15172 72 aa7.46□□□□□ -1.22
NDUFA3-213ENST00000484103 CAMK2N1Q7Z7J9 78 aa7.43□□□□□ -1.22
NDUFA3-213ENST00000484103 A0A0D9SG42 100 aa7.42□□□□□ -1.22
NDUFA3-213ENST00000484103 UQCR11O14957 56 aa7.42□□□□□ -1.22
NDUFA3-213ENST00000484103 A8MU10 97 aa7.38□□□□□ -1.23
NDUFA3-213ENST00000484103 KRTAP12-1P59990 96 aa7.35□□□□□ -1.23
NDUFA3-213ENST00000484103 MIR22HGQ0VDD5 57 aa7.31□□□□□ -1.24
NDUFA3-213ENST00000484103 SPINT4Q6UDR6 99 aa7.28□□□□□ -1.24
NDUFA3-213ENST00000484103 A6NED7 52 aa7.23□□□□□ -1.25
NDUFA3-213ENST00000484103 DSTQ03001 7570 aaKnown RBP7.2□□□□□ -1.26
NDUFA3-213ENST00000484103 KRTAP19-7Q3SYF9 63 aa7.2□□□□□ -1.26
NDUFA3-213ENST00000484103 MT1EP04732 61 aa7.16□□□□□ -1.26
NDUFA3-213ENST00000484103 LCE5AQ5TCM9 118 aa7.13□□□□□ -1.27
NDUFA3-213ENST00000484103 KRTAP19-3Q7Z4W3 81 aa7.12□□□□□ -1.27
NDUFA3-213ENST00000484103 KRTAP4-9Q9BYQ8 210 aa7.08□□□□□ -1.28
NDUFA3-213ENST00000484103 CDC42SE1Q9NRR8 79 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms