RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 GPR98Q8WXG9 6306 aa5.32□□□□□ -1.56
UBR4-213ENST00000483922 PRO2289Q9P1D8 64 aa5.3□□□□□ -1.56
UBR4-213ENST00000483922 H0YAA0 97 aa5.23□□□□□ -1.57
UBR4-213ENST00000483922 H3BT86 120 aa5.22□□□□□ -1.57
UBR4-213ENST00000483922 CYP4F30PQ9H0H9 118 aa5.22□□□□□ -1.57
UBR4-213ENST00000483922 A8MUN3 132 aa5.21□□□□□ -1.58
UBR4-213ENST00000483922 KRTAP10-7P60409 375 aaPredicted RBP5.2□□□□□ -1.58
UBR4-213ENST00000483922 M0R143 59 aa5.19□□□□□ -1.58
UBR4-213ENST00000483922 ADM2Q7Z4H4 148 aa5.19□□□□□ -1.58
UBR4-213ENST00000483922 PLAC4Q8WY50 150 aa5.19□□□□□ -1.58
UBR4-213ENST00000483922 DSTQ03001 7570 aaKnown RBP5.18□□□□□ -1.58
UBR4-213ENST00000483922 K7EP34 96 aa5.16□□□□□ -1.58
UBR4-213ENST00000483922 TP53AIP1Q9HCN2 124 aa5.16□□□□□ -1.58
UBR4-213ENST00000483922 TSTD3H0UI37 97 aa5.15□□□□□ -1.59
UBR4-213ENST00000483922 KRTAP10-12P60413 245 aa5.15□□□□□ -1.59
UBR4-213ENST00000483922 NDUFC1O43677 76 aa5.13□□□□□ -1.59
UBR4-213ENST00000483922 KRTAP4-9Q9BYQ8 210 aa5.13□□□□□ -1.59
UBR4-213ENST00000483922 A0A1W2PPM0 123 aa5.1□□□□□ -1.59
UBR4-213ENST00000483922 C9orf118A6NHY6 69 aa5.1□□□□□ -1.59
UBR4-213ENST00000483922 TAX1BP3O14907 124 aa5.09□□□□□ -1.59
UBR4-213ENST00000483922 UBL5Q9BZL1 73 aa5.09□□□□□ -1.59
UBR4-213ENST00000483922 P0C880 135 aa5.08□□□□□ -1.6
UBR4-213ENST00000483922 BATFQ16520 125 aa5.08□□□□□ -1.6
UBR4-213ENST00000483922 TMA7Q9Y2S6 64 aaKnown RBP5.07□□□□□ -1.6
UBR4-213ENST00000483922 LOC101927531A0A1B0GV80 90 aa5.04□□□□□ -1.6
UBR4-213ENST00000483922 R4GN34 69 aa5.03□□□□□ -1.6
UBR4-213ENST00000483922 TRAV22A0A0B4J277 110 aa5.02□□□□□ -1.61
UBR4-213ENST00000483922 KRTAP3-2Q9BYR7 98 aa5.01□□□□□ -1.61
UBR4-213ENST00000483922 PRO0461Q9UI25 63 aa5.01□□□□□ -1.61
UBR4-213ENST00000483922 M0QZ58 72 aa5□□□□□ -1.61
UBR4-213ENST00000483922 SPCS1Q9Y6A9 102 aa5□□□□□ -1.61
UBR4-213ENST00000483922 ACYP1P07311 99 aa4.97□□□□□ -1.61
UBR4-213ENST00000483922 LINC01554Q52M75 96 aa4.96□□□□□ -1.62
UBR4-213ENST00000483922 LCE5AQ5TCM9 118 aa4.96□□□□□ -1.62
UBR4-213ENST00000483922 HMCN1Q96RW7 5635 aa4.95□□□□□ -1.62
UBR4-213ENST00000483922 LCE1DQ5T752 114 aa4.93□□□□□ -1.62
UBR4-213ENST00000483922 H0Y9P7 68 aa4.91□□□□□ -1.62
UBR4-213ENST00000483922 KRTAP19-7Q3SYF9 63 aa4.89□□□□□ -1.63
UBR4-213ENST00000483922 AHNAK2Q8IVF2 5795 aa4.87□□□□□ -1.63
UBR4-213ENST00000483922 UQCRQO14949 82 aa4.87□□□□□ -1.63
UBR4-213ENST00000483922 SMIM6P0DI80 62 aa4.87□□□□□ -1.63
UBR4-213ENST00000483922 C20orf197Q8N268 126 aa4.86□□□□□ -1.63
UBR4-213ENST00000483922 ATOX1O00244 68 aa4.84□□□□□ -1.63
UBR4-213ENST00000483922 KRTAP19-3Q7Z4W3 81 aa4.84□□□□□ -1.63
UBR4-213ENST00000483922 MT1EP04732 61 aa4.83□□□□□ -1.64
UBR4-213ENST00000483922 LINC00208Q96KT6 92 aa4.81□□□□□ -1.64
UBR4-213ENST00000483922 MT4P47944 62 aa4.79□□□□□ -1.64
UBR4-213ENST00000483922 KRTAP5-10Q6L8G5 202 aa4.79□□□□□ -1.64
UBR4-213ENST00000483922 ETDBQ3ZM63 59 aa4.77□□□□□ -1.65
UBR4-213ENST00000483922 LCE4AQ5TA78 99 aa4.75□□□□□ -1.65
UBR4-213ENST00000483922 CYSTM1Q9H1C7 97 aa4.74□□□□□ -1.65
UBR4-213ENST00000483922 HIST1H4AP62805 103 aaKnown RBP4.73□□□□□ -1.65
UBR4-213ENST00000483922 DMAC1Q96GE9 116 aa4.72□□□□□ -1.65
UBR4-213ENST00000483922 MT-ATP8P03928 68 aa4.7□□□□□ -1.66
UBR4-213ENST00000483922 F8W1H4 67 aa4.69□□□□□ -1.66
UBR4-213ENST00000483922 KRTAP4-6Q9BYQ5 205 aa4.69□□□□□ -1.66
UBR4-213ENST00000483922 OCR1Q9BZK8 76 aa4.69□□□□□ -1.66
UBR4-213ENST00000483922 MT1GP13640 62 aa4.68□□□□□ -1.66
UBR4-213ENST00000483922 COL5A1-AS1Q5SY13 56 aa4.68□□□□□ -1.66
UBR4-213ENST00000483922 KRTAP5-4Q6L8H1 288 aa4.67□□□□□ -1.66
UBR4-213ENST00000483922 LOC105371267A0A1B0GV96 52 aa4.64□□□□□ -1.67
UBR4-213ENST00000483922 ATP5EP2Q5VTU8 51 aa4.64□□□□□ -1.67
UBR4-213ENST00000483922 MP68P56378 58 aa4.63□□□□□ -1.67
UBR4-213ENST00000483922 KRTAP19-5Q3LI72 72 aa4.63□□□□□ -1.67
UBR4-213ENST00000483922 KRTAP5-7Q6L8G8 165 aa4.63□□□□□ -1.67
UBR4-213ENST00000483922 MT1MQ8N339 61 aa4.63□□□□□ -1.67
UBR4-213ENST00000483922 KRTAP13-4Q3LI77 160 aa4.62□□□□□ -1.67
UBR4-213ENST00000483922 GTF2H5Q6ZYL4 71 aa4.61□□□□□ -1.67
UBR4-213ENST00000483922 KRTAP4-3Q9BYR4 195 aa4.61□□□□□ -1.67
UBR4-213ENST00000483922 FAM240AA0A1B0GVK7 77 aa4.58□□□□□ -1.68
UBR4-213ENST00000483922 KRTAP5-3Q6L8H2 238 aa4.57□□□□□ -1.68
UBR4-213ENST00000483922 TRAV7A0A075B6U4 112 aa4.56□□□□□ -1.68
UBR4-213ENST00000483922 PP632Q6XCG6 107 aa4.55□□□□□ -1.68
UBR4-213ENST00000483922 MT1LQ93083 61 aa4.55□□□□□ -1.68
UBR4-213ENST00000483922 CAMK2N1Q7Z7J9 78 aa4.54□□□□□ -1.68
UBR4-213ENST00000483922 A0A0D9SG42 100 aa4.53□□□□□ -1.68
UBR4-213ENST00000483922 H3BPC8 53 aa4.52□□□□□ -1.69
UBR4-213ENST00000483922 LINC00643Q86TS7 51 aa4.52□□□□□ -1.69
UBR4-213ENST00000483922 ACYP2P14621 99 aa4.47□□□□□ -1.69
UBR4-213ENST00000483922 PCP4L1A6NKN8 68 aa4.44□□□□□ -1.7
UBR4-213ENST00000483922 SPTSSBQ8NFR3 76 aa4.42□□□□□ -1.7
UBR4-213ENST00000483922 KRTAP20-2Q3LI61 65 aa4.41□□□□□ -1.7
UBR4-213ENST00000483922 KRTAP4-7Q9BYR0 210 aa4.39□□□□□ -1.71
UBR4-213ENST00000483922 SPRR5A0A1B0GTR4 108 aa4.38□□□□□ -1.71
UBR4-213ENST00000483922 CHKB-CPT1BH3BT56 60 aa4.34□□□□□ -1.71
UBR4-213ENST00000483922 C10orf95Q9H7T3 257 aa4.33□□□□□ -1.72
UBR4-213ENST00000483922 KRTAP5-5Q701N2 237 aaPredicted RBP4.32□□□□□ -1.72
UBR4-213ENST00000483922 SCGB1A1P11684 91 aa4.31□□□□□ -1.72
UBR4-213ENST00000483922 LCE3AQ5TA76 89 aa4.31□□□□□ -1.72
UBR4-213ENST00000483922 KRTAP12-1P59990 96 aa4.28□□□□□ -1.72
UBR4-213ENST00000483922 SPATA8Q6RVD6 105 aa4.28□□□□□ -1.72
UBR4-213ENST00000483922 SYNE1Q8NF91 8797 aaKnown RBP4.28□□□□□ -1.72
UBR4-213ENST00000483922 SPINT4Q6UDR6 99 aa4.27□□□□□ -1.73
UBR4-213ENST00000483922 A0A1B0GV90 55 aa4.2□□□□□ -1.74
UBR4-213ENST00000483922 KRTAP12-4P60329 112 aa4.18□□□□□ -1.74
UBR4-213ENST00000483922 LOC100996750A0A140TA64 210 aa4.17□□□□□ -1.74
UBR4-213ENST00000483922 SNURFQ9Y675 71 aa4.17□□□□□ -1.74
UBR4-213ENST00000483922 A0A1B0GU33 70 aa4.12□□□□□ -1.75
UBR4-213ENST00000483922 SPANXA2-OT1Q8N9U9 137 aa4.12□□□□□ -1.75
UBR4-213ENST00000483922 KRTAP4-11Q9BYQ6 195 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms