RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 C9orf92A6NGG3 77 aa4.86□□□□□ -1.63
CDC42SE1-204ENST00000483763 MT1HL1P0DM35 61 aa4.85□□□□□ -1.63
CDC42SE1-204ENST00000483763 HMCN2Q8NDA2 5059 aa4.84□□□□□ -1.63
CDC42SE1-204ENST00000483763 COA5Q86WW8 74 aa4.82□□□□□ -1.64
CDC42SE1-204ENST00000483763 IGLV7-46A0A075B6I9 117 aa4.82□□□□□ -1.64
CDC42SE1-204ENST00000483763 LINC01558Q9Y6Z2 57 aa4.8□□□□□ -1.64
CDC42SE1-204ENST00000483763 LPAP08519 4548 aa4.8□□□□□ -1.64
CDC42SE1-204ENST00000483763 IGKV2-30P06310 120 aa4.79□□□□□ -1.64
CDC42SE1-204ENST00000483763 ROMO1P60602 79 aa4.79□□□□□ -1.64
CDC42SE1-204ENST00000483763 C20orf166-AS1Q96NR2 134 aa4.79□□□□□ -1.64
CDC42SE1-204ENST00000483763 RNF213Q63HN8 5207 aa4.79□□□□□ -1.64
CDC42SE1-204ENST00000483763 LRP2P98164 4655 aa4.79□□□□□ -1.64
CDC42SE1-204ENST00000483763 A8MUU9 505 aa4.78□□□□□ -1.64
CDC42SE1-204ENST00000483763 IGKV2D-30A0A075B6S6 120 aa4.77□□□□□ -1.65
CDC42SE1-204ENST00000483763 HRES1P13985 223 aa4.77□□□□□ -1.65
CDC42SE1-204ENST00000483763 CSAG1Q6PB30 78 aa4.76□□□□□ -1.65
CDC42SE1-204ENST00000483763 SPINK7P58062 85 aa4.75□□□□□ -1.65
CDC42SE1-204ENST00000483763 KRTAP23-1A1A580 65 aa4.72□□□□□ -1.65
CDC42SE1-204ENST00000483763 MIR22HGQ0VDD5 57 aa4.69□□□□□ -1.66
CDC42SE1-204ENST00000483763 XP32Q5T750 250 aa4.69□□□□□ -1.66
CDC42SE1-204ENST00000483763 DMAC1Q96GE9 116 aa4.69□□□□□ -1.66
CDC42SE1-204ENST00000483763 MUC2Q02817 5179 aa4.67□□□□□ -1.66
CDC42SE1-204ENST00000483763 LCE2CQ5TA81 110 aa4.67□□□□□ -1.66
CDC42SE1-204ENST00000483763 LCE2AQ5TA79 106 aaPredicted RBP4.66□□□□□ -1.66
CDC42SE1-204ENST00000483763 RPL37P61927 97 aaKnown RBP4.65□□□□□ -1.66
CDC42SE1-204ENST00000483763 ACYP2P14621 99 aa4.65□□□□□ -1.67
CDC42SE1-204ENST00000483763 P0C880 135 aa4.64□□□□□ -1.67
CDC42SE1-204ENST00000483763 KRTAP3-1Q9BYR8 98 aa4.63□□□□□ -1.67
CDC42SE1-204ENST00000483763 TPRXLQ17RH7 258 aa4.62□□□□□ -1.67
CDC42SE1-204ENST00000483763 SPATA8Q6RVD6 105 aa4.58□□□□□ -1.68
CDC42SE1-204ENST00000483763 KRTAP25-1Q3LHN0 102 aa4.55□□□□□ -1.68
CDC42SE1-204ENST00000483763 LUZP6Q538Z0 58 aa4.54□□□□□ -1.68
CDC42SE1-204ENST00000483763 COX6B2Q6YFQ2 88 aa4.54□□□□□ -1.68
CDC42SE1-204ENST00000483763 LCE2BO14633 110 aa4.53□□□□□ -1.68
CDC42SE1-204ENST00000483763 A0A1B0GU69 56 aa4.5□□□□□ -1.69
CDC42SE1-204ENST00000483763 NDUFAF8A1L188 74 aa4.5□□□□□ -1.69
CDC42SE1-204ENST00000483763 LOC100996750A0A140TA64 210 aa4.48□□□□□ -1.69
CDC42SE1-204ENST00000483763 K7ERS5 55 aa4.48□□□□□ -1.69
CDC42SE1-204ENST00000483763 KRTAP4-6Q9BYQ5 205 aa4.48□□□□□ -1.69
CDC42SE1-204ENST00000483763 UQCR11O14957 56 aa4.47□□□□□ -1.69
CDC42SE1-204ENST00000483763 KRTAP4-1Q9BYQ7 146 aa4.46□□□□□ -1.7
CDC42SE1-204ENST00000483763 MUC17Q685J3 4493 aa4.45□□□□□ -1.7
CDC42SE1-204ENST00000483763 FAT4Q6V0I7 4981 aa4.45□□□□□ -1.7
CDC42SE1-204ENST00000483763 H1FX-AS1Q4G0G2 97 aa4.39□□□□□ -1.71
CDC42SE1-204ENST00000483763 S4R3F8 94 aa4.38□□□□□ -1.71
CDC42SE1-204ENST00000483763 SPINT4Q6UDR6 99 aa4.36□□□□□ -1.71
CDC42SE1-204ENST00000483763 KRTAP19-2Q3LHN2 52 aa4.34□□□□□ -1.71
CDC42SE1-204ENST00000483763 KRTAP15-1Q3LI76 137 aa4.33□□□□□ -1.72
CDC42SE1-204ENST00000483763 KRTAP10-6P60371 365 aaPredicted RBP4.32□□□□□ -1.72
CDC42SE1-204ENST00000483763 LORP23490 312 aaPredicted RBP4.3□□□□□ -1.72
CDC42SE1-204ENST00000483763 H0YAA0 97 aa4.29□□□□□ -1.72
CDC42SE1-204ENST00000483763 A0A1B0GU33 70 aa4.28□□□□□ -1.72
CDC42SE1-204ENST00000483763 KRTAP13-4Q3LI77 160 aa4.24□□□□□ -1.73
CDC42SE1-204ENST00000483763 FLGP20930 4061 aaPredicted RBP4.24□□□□□ -1.73
CDC42SE1-204ENST00000483763 CAMK2N1Q7Z7J9 78 aa4.24□□□□□ -1.73
CDC42SE1-204ENST00000483763 FSIP2Q5CZC0 6907 aa4.21□□□□□ -1.74
CDC42SE1-204ENST00000483763 CRIPTQ9P021 101 aa4.21□□□□□ -1.74
CDC42SE1-204ENST00000483763 A0A0D9SG42 100 aa4.14□□□□□ -1.75
CDC42SE1-204ENST00000483763 KRTAP9-6A0A140TA67 174 aa4.14□□□□□ -1.75
CDC42SE1-204ENST00000483763 MT1HP80294 61 aa4.11□□□□□ -1.75
CDC42SE1-204ENST00000483763 M0R2T5 61 aa4.1□□□□□ -1.75
CDC42SE1-204ENST00000483763 KRTAP9-2Q9BYQ4 174 aa4.08□□□□□ -1.76
CDC42SE1-204ENST00000483763 M0QZ58 72 aa4.07□□□□□ -1.76
CDC42SE1-204ENST00000483763 KRTAP12-2P59991 146 aa4.06□□□□□ -1.76
CDC42SE1-204ENST00000483763 R4GN34 69 aa4.06□□□□□ -1.76
CDC42SE1-204ENST00000483763 KRTAP12-1P59990 96 aa4.04□□□□□ -1.76
CDC42SE1-204ENST00000483763 KRTAP9-8Q9BYQ0 159 aa3.96□□□□□ -1.78
CDC42SE1-204ENST00000483763 USH2AO75445 5202 aa3.96□□□□□ -1.78
CDC42SE1-204ENST00000483763 C10orf95Q9H7T3 257 aa3.95□□□□□ -1.78
CDC42SE1-204ENST00000483763 MT1FP04733 61 aa3.94□□□□□ -1.78
CDC42SE1-204ENST00000483763 MT2AP02795 61 aa3.94□□□□□ -1.78
CDC42SE1-204ENST00000483763 KRTAP10-10P60014 251 aa3.91□□□□□ -1.78
CDC42SE1-204ENST00000483763 KRTAP19-1Q8IUB9 90 aa3.91□□□□□ -1.78
CDC42SE1-204ENST00000483763 SPRR2GQ9BYE4 73 aa3.89□□□□□ -1.79
CDC42SE1-204ENST00000483763 PRO2289Q9P1D8 64 aa3.89□□□□□ -1.79
CDC42SE1-204ENST00000483763 SSPOA2VEC9 5147 aa3.87□□□□□ -1.79
CDC42SE1-204ENST00000483763 CRCT1Q9UGL9 99 aa3.84□□□□□ -1.79
CDC42SE1-204ENST00000483763 PLAC4Q8WY50 150 aa3.82□□□□□ -1.8
CDC42SE1-204ENST00000483763 KRTAP9-3Q9BYQ3 159 aa3.8□□□□□ -1.8
CDC42SE1-204ENST00000483763 KRTAP4-8Q9BYQ9 185 aa3.77□□□□□ -1.81
CDC42SE1-204ENST00000483763 KRTAP19-8Q3LI54 63 aa3.75□□□□□ -1.81
CDC42SE1-204ENST00000483763 FCGBPQ9Y6R7 5405 aaPredicted RBP3.75□□□□□ -1.81
CDC42SE1-204ENST00000483763 MT1BP07438 61 aa3.74□□□□□ -1.81
CDC42SE1-204ENST00000483763 SYNE2Q8WXH0 6885 aaKnown RBP3.71□□□□□ -1.82
CDC42SE1-204ENST00000483763 MACF1Q9UPN3 7388 aaKnown RBP3.68□□□□□ -1.82
CDC42SE1-204ENST00000483763 KRTAP9-7A8MTY7 169 aa3.66□□□□□ -1.82
CDC42SE1-204ENST00000483763 KRTAP10-5P60370 271 aa3.65□□□□□ -1.83
CDC42SE1-204ENST00000483763 MT1XP80297 61 aa3.65□□□□□ -1.83
CDC42SE1-204ENST00000483763 KRTAP4-8A0A0G2JLE6 195 aa3.63□□□□□ -1.83
CDC42SE1-204ENST00000483763 INE1O15225 51 aa3.63□□□□□ -1.83
CDC42SE1-204ENST00000483763 TNP1P09430 55 aa3.62□□□□□ -1.83
CDC42SE1-204ENST00000483763 KRTAP5-3Q6L8H2 238 aa3.61□□□□□ -1.83
CDC42SE1-204ENST00000483763 KRTAP4-7Q9BYR0 210 aa3.59□□□□□ -1.83
CDC42SE1-204ENST00000483763 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.58□□□□□ -1.84
CDC42SE1-204ENST00000483763 PP632Q6XCG6 107 aa3.56□□□□□ -1.84
CDC42SE1-204ENST00000483763 KRTAP10-7P60409 375 aaPredicted RBP3.53□□□□□ -1.84
CDC42SE1-204ENST00000483763 KMT2DO14686 5537 aa3.52□□□□□ -1.85
CDC42SE1-204ENST00000483763 KRTAP19-6Q3LI70 58 aa3.52□□□□□ -1.85
CDC42SE1-204ENST00000483763 LCE3BQ5TA77 95 aa3.52□□□□□ -1.85
CDC42SE1-204ENST00000483763 LCE3AQ5TA76 89 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms