RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 ST20Q9HBF5 79 aa1.43□□□□□ -2.18
SMC6-208ENST00000481708 POLR2KP53803 58 aaKnown RBP1.43□□□□□ -2.18
SMC6-208ENST00000481708 KRTAP5-1Q6L8H4 278 aa1.43□□□□□ -2.18
SMC6-208ENST00000481708 M0QY20 66 aa1.42□□□□□ -2.18
SMC6-208ENST00000481708 LINC00472Q9H8W2 130 aa1.42□□□□□ -2.18
SMC6-208ENST00000481708 H3BUT2 72 aa1.42□□□□□ -2.18
SMC6-208ENST00000481708 TRBV25-1A0A075B6N4 114 aa1.41□□□□□ -2.18
SMC6-208ENST00000481708 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.41□□□□□ -2.18
SMC6-208ENST00000481708 FCER1GP30273 86 aa1.41□□□□□ -2.18
SMC6-208ENST00000481708 DEFB1P60022 68 aa1.41□□□□□ -2.18
SMC6-208ENST00000481708 KRTDAPP60985 99 aa1.41□□□□□ -2.18
SMC6-208ENST00000481708 SPINK13Q1W4C9 94 aa1.41□□□□□ -2.18
SMC6-208ENST00000481708 KRTAP4-4Q9BYR3 166 aa1.41□□□□□ -2.18
SMC6-208ENST00000481708 IGIPA6NJ69 53 aa1.41□□□□□ -2.18
SMC6-208ENST00000481708 F8WEM9 126 aa1.41□□□□□ -2.18
SMC6-208ENST00000481708 PMCHL1Q16048 86 aa1.41□□□□□ -2.18
SMC6-208ENST00000481708 ZCCHC13Q8WW36 166 aaKnown RBP1.41□□□□□ -2.18
SMC6-208ENST00000481708 AMELXQ99217 191 aa1.41□□□□□ -2.18
SMC6-208ENST00000481708 TRGV2A0A075B6R0 118 aa1.4□□□□□ -2.18
SMC6-208ENST00000481708 D6R8Y8 96 aa1.4□□□□□ -2.18
SMC6-208ENST00000481708 H3BVH4 76 aa1.4□□□□□ -2.18
SMC6-208ENST00000481708 ENHOQ6UWT2 76 aa1.4□□□□□ -2.18
SMC6-208ENST00000481708 SMIM2Q9BVW6 85 aa1.4□□□□□ -2.19
SMC6-208ENST00000481708 OBSCNQ5VST9 7968 aa1.4□□□□□ -2.19
SMC6-208ENST00000481708 IFI27P40305 119 aaPredicted RBP1.4□□□□□ -2.19
SMC6-208ENST00000481708 I3L3M4 83 aa1.4□□□□□ -2.19
SMC6-208ENST00000481708 TIMM8BQ9Y5J9 83 aaPredicted RBP1.4□□□□□ -2.19
SMC6-208ENST00000481708 C3orf79P0CE67 100 aa1.39□□□□□ -2.19
SMC6-208ENST00000481708 SPAG11BQ08648 103 aa1.39□□□□□ -2.19
SMC6-208ENST00000481708 SPATA45Q537H7 98 aa1.39□□□□□ -2.19
SMC6-208ENST00000481708 SPAG11AQ6PDA7 123 aa1.39□□□□□ -2.19
SMC6-208ENST00000481708 IGKV4-1P06312 121 aa1.39□□□□□ -2.19
SMC6-208ENST00000481708 BAGE3Q86Y29 109 aa1.39□□□□□ -2.19
SMC6-208ENST00000481708 RPL39LQ96EH5 51 aaKnown RBP1.39□□□□□ -2.19
SMC6-208ENST00000481708 UBE2D4Q9Y2X8 147 aa1.39□□□□□ -2.19
SMC6-208ENST00000481708 LINC01558Q9Y6Z2 57 aa1.39□□□□□ -2.19
SMC6-208ENST00000481708 TRGV1A0A0A0MS02 117 aa1.38□□□□□ -2.19
SMC6-208ENST00000481708 NDUFC1O43677 76 aa1.38□□□□□ -2.19
SMC6-208ENST00000481708 LEPROTL1O95214 131 aa1.38□□□□□ -2.19
SMC6-208ENST00000481708 PRO0255Q9UI72 69 aa1.38□□□□□ -2.19
SMC6-208ENST00000481708 M0R2T5 61 aa1.38□□□□□ -2.19
SMC6-208ENST00000481708 NOP10Q9NPE3 64 aaKnown RBP1.38□□□□□ -2.19
SMC6-208ENST00000481708 PLNP26678 52 aa1.37□□□□□ -2.19
SMC6-208ENST00000481708 KMT2DO14686 5537 aa1.37□□□□□ -2.19
SMC6-208ENST00000481708 F8VRH5 84 aa1.37□□□□□ -2.19
SMC6-208ENST00000481708 COX8AP10176 69 aa1.37□□□□□ -2.19
SMC6-208ENST00000481708 KRTAP19-8Q3LI54 63 aa1.37□□□□□ -2.19
SMC6-208ENST00000481708 KRTAP5-7Q6L8G8 165 aa1.37□□□□□ -2.19
SMC6-208ENST00000481708 SPRR4Q96PI1 79 aa1.37□□□□□ -2.19
SMC6-208ENST00000481708 A0A087WVE0 104 aa1.36□□□□□ -2.19
SMC6-208ENST00000481708 MGPP08493 103 aa1.36□□□□□ -2.19
SMC6-208ENST00000481708 SPINK7P58062 85 aa1.35□□□□□ -2.19
SMC6-208ENST00000481708 WFDC10BQ8IUB3 73 aa1.35□□□□□ -2.19
SMC6-208ENST00000481708 RPL39P62891 51 aaKnown RBP1.35□□□□□ -2.19
SMC6-208ENST00000481708 MT2AP02795 61 aa1.35□□□□□ -2.19
SMC6-208ENST00000481708 FAM74A4Q5TZK3 123 aa1.35□□□□□ -2.19
SMC6-208ENST00000481708 PRR15LQ9BU68 103 aa1.35□□□□□ -2.19
SMC6-208ENST00000481708 SPRR1AP35321 89 aa1.34□□□□□ -2.19
SMC6-208ENST00000481708 COX6A2Q02221 97 aa1.34□□□□□ -2.19
SMC6-208ENST00000481708 MYMXA0A1B0GTQ4 84 aa1.34□□□□□ -2.2
SMC6-208ENST00000481708 LINC00959A0A1B0GUT2 108 aa1.34□□□□□ -2.2
SMC6-208ENST00000481708 NDUFA1O15239 70 aa1.34□□□□□ -2.2
SMC6-208ENST00000481708 COX17Q14061 63 aa1.34□□□□□ -2.2
SMC6-208ENST00000481708 KRTAP2-3P0C7H8 128 aa1.33□□□□□ -2.2
SMC6-208ENST00000481708 UNQ6190/PRO20217Q6UXQ8 127 aa1.33□□□□□ -2.2
SMC6-208ENST00000481708 Q8IZM0 81 aa1.33□□□□□ -2.2
SMC6-208ENST00000481708 KRTAP2-4Q9BYR9 128 aa1.33□□□□□ -2.2
SMC6-208ENST00000481708 KRTAP5-10Q6L8G5 202 aa1.33□□□□□ -2.2
SMC6-208ENST00000481708 COX6B2Q6YFQ2 88 aa1.33□□□□□ -2.2
SMC6-208ENST00000481708 LCE3AQ5TA76 89 aa1.32□□□□□ -2.2
SMC6-208ENST00000481708 CDKN2A-AS1Q9UH64 79 aa1.32□□□□□ -2.2
SMC6-208ENST00000481708 TRBV30A0A0K0K1B3 111 aa1.31□□□□□ -2.2
SMC6-208ENST00000481708 ZNF815PA8K554 130 aa1.31□□□□□ -2.2
SMC6-208ENST00000481708 MT1FP04733 61 aa1.31□□□□□ -2.2
SMC6-208ENST00000481708 COX6CP09669 75 aa1.31□□□□□ -2.2
SMC6-208ENST00000481708 SPRR1BP22528 89 aa1.31□□□□□ -2.2
SMC6-208ENST00000481708 LINC00643Q86TS7 51 aa1.31□□□□□ -2.2
SMC6-208ENST00000481708 KRTAP20-1Q3LI63 56 aa1.31□□□□□ -2.2
SMC6-208ENST00000481708 SNURFQ9Y675 71 aa1.31□□□□□ -2.2
SMC6-208ENST00000481708 TMEM170BQ5T4T1 132 aa1.3□□□□□ -2.2
SMC6-208ENST00000481708 Q6ZQY7 126 aa1.3□□□□□ -2.2
SMC6-208ENST00000481708 PLAC4Q8WY50 150 aa1.3□□□□□ -2.2
SMC6-208ENST00000481708 CLPSL2Q6UWE3 100 aa1.3□□□□□ -2.2
SMC6-208ENST00000481708 MACF1Q9UPN3 7388 aaKnown RBP1.3□□□□□ -2.2
SMC6-208ENST00000481708 LINC00308Q8TCZ7 52 aa1.3□□□□□ -2.2
SMC6-208ENST00000481708 ANGP03950 147 aaKnown RBP1.29□□□□□ -2.2
SMC6-208ENST00000481708 SMIM13P0DJ93 91 aa1.29□□□□□ -2.2
SMC6-208ENST00000481708 MUSTN1Q8IVN3 82 aa1.29□□□□□ -2.2
SMC6-208ENST00000481708 C6orf48Q9UBA6 75 aa1.29□□□□□ -2.2
SMC6-208ENST00000481708 SYNE2Q8WXH0 6885 aaKnown RBP1.28□□□□□ -2.2
SMC6-208ENST00000481708 BCE1O60756 84 aa1.28□□□□□ -2.21
SMC6-208ENST00000481708 KRTAP12-4P60329 112 aa1.28□□□□□ -2.21
SMC6-208ENST00000481708 MUC12Q9UKN1 5478 aa1.28□□□□□ -2.21
SMC6-208ENST00000481708 TRBV7-4A0A0J9YYF1 115 aa1.27□□□□□ -2.21
SMC6-208ENST00000481708 KRTAP5-8O75690 187 aa1.27□□□□□ -2.21
SMC6-208ENST00000481708 SPRR2GQ9BYE4 73 aa1.27□□□□□ -2.21
SMC6-208ENST00000481708 KCNQ1DNQ9H478 68 aa1.27□□□□□ -2.21
SMC6-208ENST00000481708 KRTAP2-1Q9BYU5 128 aa1.27□□□□□ -2.21
SMC6-208ENST00000481708 MT1BP07438 61 aa1.27□□□□□ -2.21
SMC6-208ENST00000481708 H0YGX0 51 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms