RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 FCGBPQ9Y6R7 5405 aaPredicted RBP4.59□□□□□ -1.67
VCP-206ENST00000480327 KRTAP9-8Q9BYQ0 159 aa4.58□□□□□ -1.68
VCP-206ENST00000480327 TP53AIP1Q9HCN2 124 aa4.58□□□□□ -1.68
VCP-206ENST00000480327 RBM12B-AS1Q9P1G2 102 aa4.57□□□□□ -1.68
VCP-206ENST00000480327 MPLKIPQ8TAP9 179 aa4.56□□□□□ -1.68
VCP-206ENST00000480327 C7orf65Q6ZTY9 151 aa4.55□□□□□ -1.68
VCP-206ENST00000480327 BRK1Q8WUW1 75 aa4.55□□□□□ -1.68
VCP-206ENST00000480327 PMAIP1Q13794 54 aa4.54□□□□□ -1.68
VCP-206ENST00000480327 TRAV22A0A0B4J277 110 aa4.52□□□□□ -1.69
VCP-206ENST00000480327 H0Y9P7 68 aa4.5□□□□□ -1.69
VCP-206ENST00000480327 OCR1Q9BZK8 76 aa4.49□□□□□ -1.69
VCP-206ENST00000480327 LCE2BO14633 110 aa4.48□□□□□ -1.69
VCP-206ENST00000480327 MT2AP02795 61 aa4.48□□□□□ -1.69
VCP-206ENST00000480327 LOC101927531A0A1B0GV80 90 aa4.47□□□□□ -1.69
VCP-206ENST00000480327 CYP4F30PQ9H0H9 118 aa4.47□□□□□ -1.69
VCP-206ENST00000480327 MACF1Q9UPN3 7388 aaKnown RBP4.47□□□□□ -1.69
VCP-206ENST00000480327 Q1T7F1 81 aa4.46□□□□□ -1.7
VCP-206ENST00000480327 KRTAP19-1Q8IUB9 90 aa4.46□□□□□ -1.7
VCP-206ENST00000480327 LINC00208Q96KT6 92 aa4.46□□□□□ -1.7
VCP-206ENST00000480327 SYNE2Q8WXH0 6885 aaKnown RBP4.45□□□□□ -1.7
VCP-206ENST00000480327 MT1FP04733 61 aa4.45□□□□□ -1.7
VCP-206ENST00000480327 C1orf64Q8NEQ6 169 aa4.45□□□□□ -1.7
VCP-206ENST00000480327 SNURFQ9Y675 71 aa4.45□□□□□ -1.7
VCP-206ENST00000480327 MP68P56378 58 aa4.44□□□□□ -1.7
VCP-206ENST00000480327 KRTAP9-3Q9BYQ3 159 aa4.44□□□□□ -1.7
VCP-206ENST00000480327 H1FX-AS1Q4G0G2 97 aa4.43□□□□□ -1.7
VCP-206ENST00000480327 KRTAP3-1Q9BYR8 98 aa4.41□□□□□ -1.7
VCP-206ENST00000480327 KTN1-AS1Q86SY8 53 aa4.38□□□□□ -1.71
VCP-206ENST00000480327 H3BPC8 53 aa4.37□□□□□ -1.71
VCP-206ENST00000480327 KRTAP10-10P60014 251 aa4.34□□□□□ -1.71
VCP-206ENST00000480327 S4R3F8 94 aa4.34□□□□□ -1.71
VCP-206ENST00000480327 KRTAP19-6Q3LI70 58 aa4.32□□□□□ -1.72
VCP-206ENST00000480327 LCA10Q71F78 164 aa4.32□□□□□ -1.72
VCP-206ENST00000480327 A8MUN3 132 aa4.28□□□□□ -1.72
VCP-206ENST00000480327 Q5VV11 94 aa4.27□□□□□ -1.73
VCP-206ENST00000480327 CSAG1Q6PB30 78 aa4.27□□□□□ -1.73
VCP-206ENST00000480327 SPANXA2-OT1Q8N9U9 137 aa4.27□□□□□ -1.73
VCP-206ENST00000480327 KRTAP3-3Q9BYR6 98 aa4.27□□□□□ -1.73
VCP-206ENST00000480327 PSPHP1O15172 72 aa4.26□□□□□ -1.73
VCP-206ENST00000480327 DMAC1Q96GE9 116 aa4.25□□□□□ -1.73
VCP-206ENST00000480327 A6NN06 94 aa4.24□□□□□ -1.73
VCP-206ENST00000480327 CHKB-CPT1BH3BT56 60 aa4.23□□□□□ -1.73
VCP-206ENST00000480327 KRTAP6-3Q3LI67 103 aa4.23□□□□□ -1.73
VCP-206ENST00000480327 CDC42SE1Q9NRR8 79 aa4.23□□□□□ -1.73
VCP-206ENST00000480327 NEBP20929 6669 aa4.2□□□□□ -1.74
VCP-206ENST00000480327 ACYP2P14621 99 aa4.2□□□□□ -1.74
VCP-206ENST00000480327 PRR15LQ9BU68 103 aa4.19□□□□□ -1.74
VCP-206ENST00000480327 MUC12Q9UKN1 5478 aa4.18□□□□□ -1.74
VCP-206ENST00000480327 SPTSSBQ8NFR3 76 aa4.18□□□□□ -1.74
VCP-206ENST00000480327 A6NED7 52 aa4.17□□□□□ -1.74
VCP-206ENST00000480327 LINC01558Q9Y6Z2 57 aa4.14□□□□□ -1.75
VCP-206ENST00000480327 ADM2Q7Z4H4 148 aa4.13□□□□□ -1.75
VCP-206ENST00000480327 A8MU10 97 aa4.12□□□□□ -1.75
VCP-206ENST00000480327 H0YAA0 97 aa4.1□□□□□ -1.75
VCP-206ENST00000480327 H3BS24 57 aa4.1□□□□□ -1.75
VCP-206ENST00000480327 LINC01554Q52M75 96 aa4.09□□□□□ -1.75
VCP-206ENST00000480327 COA5Q86WW8 74 aa4.09□□□□□ -1.75
VCP-206ENST00000480327 P0C880 135 aa4.06□□□□□ -1.76
VCP-206ENST00000480327 MT1BP07438 61 aa4.04□□□□□ -1.76
VCP-206ENST00000480327 KRTAP3-2Q9BYR7 98 aa4.04□□□□□ -1.76
VCP-206ENST00000480327 CRIPTQ9P021 101 aa4.04□□□□□ -1.76
VCP-206ENST00000480327 SPRR2GQ9BYE4 73 aa4.03□□□□□ -1.76
VCP-206ENST00000480327 MDN1Q9NU22 5596 aa4.02□□□□□ -1.77
VCP-206ENST00000480327 KMT2DO14686 5537 aa4.02□□□□□ -1.77
VCP-206ENST00000480327 KRTAP20-1Q3LI63 56 aa4□□□□□ -1.77
VCP-206ENST00000480327 R4GN34 69 aa3.99□□□□□ -1.77
VCP-206ENST00000480327 M0QZ58 72 aa3.98□□□□□ -1.77
VCP-206ENST00000480327 KRTAP19-8Q3LI54 63 aa3.98□□□□□ -1.77
VCP-206ENST00000480327 KRTAP5-9P26371 169 aa3.97□□□□□ -1.77
VCP-206ENST00000480327 KRTAP10-5P60370 271 aa3.95□□□□□ -1.78
VCP-206ENST00000480327 SPATA8Q6RVD6 105 aa3.95□□□□□ -1.78
VCP-206ENST00000480327 PRAC1Q96KF2 57 aa3.94□□□□□ -1.78
VCP-206ENST00000480327 UQCR11O14957 56 aa3.88□□□□□ -1.79
VCP-206ENST00000480327 KRTAP13-4Q3LI77 160 aa3.88□□□□□ -1.79
VCP-206ENST00000480327 A0A1B0GU69 56 aa3.87□□□□□ -1.79
VCP-206ENST00000480327 PLAC4Q8WY50 150 aa3.87□□□□□ -1.79
VCP-206ENST00000480327 MIR22HGQ0VDD5 57 aa3.86□□□□□ -1.79
VCP-206ENST00000480327 A0A1B0GU33 70 aa3.84□□□□□ -1.79
VCP-206ENST00000480327 KRTAP2-3P0C7H8 128 aa3.84□□□□□ -1.79
VCP-206ENST00000480327 KRTAP2-4Q9BYR9 128 aa3.84□□□□□ -1.79
VCP-206ENST00000480327 A0A0D9SG42 100 aa3.81□□□□□ -1.8
VCP-206ENST00000480327 ROMO1P60602 79 aa3.8□□□□□ -1.8
VCP-206ENST00000480327 MT1XP80297 61 aa3.78□□□□□ -1.8
VCP-206ENST00000480327 KRTAP25-1Q3LHN0 102 aa3.77□□□□□ -1.81
VCP-206ENST00000480327 SPRR2EP22531 72 aa3.76□□□□□ -1.81
VCP-206ENST00000480327 SPRR2BP35325 72 aa3.76□□□□□ -1.81
VCP-206ENST00000480327 SPRR2AP35326 72 aa3.76□□□□□ -1.81
VCP-206ENST00000480327 SPRR2FQ96RM1 72 aa3.76□□□□□ -1.81
VCP-206ENST00000480327 PRO2289Q9P1D8 64 aa3.76□□□□□ -1.81
VCP-206ENST00000480327 SPINT4Q6UDR6 99 aa3.74□□□□□ -1.81
VCP-206ENST00000480327 LCE1AQ5T7P2 110 aa3.72□□□□□ -1.81
VCP-206ENST00000480327 CAMK2N1Q7Z7J9 78 aa3.71□□□□□ -1.82
VCP-206ENST00000480327 KRTAP12-1P59990 96 aa3.7□□□□□ -1.82
VCP-206ENST00000480327 KRTAP2-2Q9BYT5 123 aa3.7□□□□□ -1.82
VCP-206ENST00000480327 KRTAP2-1Q9BYU5 128 aa3.7□□□□□ -1.82
VCP-206ENST00000480327 KRTAP12-2P59991 146 aa3.69□□□□□ -1.82
VCP-206ENST00000480327 KRTAP8-1Q8IUC2 63 aa3.66□□□□□ -1.82
VCP-206ENST00000480327 KRTAP4-8A0A0G2JLE6 195 aa3.65□□□□□ -1.83
VCP-206ENST00000480327 KRTAP4-8Q9BYQ9 185 aa3.65□□□□□ -1.83
VCP-206ENST00000480327 K7ERS5 55 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms