RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 CELSR3Q9NYQ7 3312 aa2.51□□□□□ -2.01
PRPF4B-205ENST00000480058 SPRR2GQ9BYE4 73 aa2.51□□□□□ -2.01
PRPF4B-205ENST00000480058 KRTAP17-1Q9BYP8 105 aa2.51□□□□□ -2.01
PRPF4B-205ENST00000480058 MYO15AQ9UKN7 3530 aa2.51□□□□□ -2.01
PRPF4B-205ENST00000480058 SVEP1Q4LDE5 3571 aa2.49□□□□□ -2.01
PRPF4B-205ENST00000480058 SMG1Q96Q15 3661 aaKnown RBP2.49□□□□□ -2.01
PRPF4B-205ENST00000480058 ASPMQ8IZT6 3477 aa2.49□□□□□ -2.01
PRPF4B-205ENST00000480058 RYR3Q15413 4870 aa2.48□□□□□ -2.01
PRPF4B-205ENST00000480058 SYNE1Q8NF91 8797 aaKnown RBP2.48□□□□□ -2.01
PRPF4B-205ENST00000480058 LORP23490 312 aaPredicted RBP2.47□□□□□ -2.01
PRPF4B-205ENST00000480058 RNF213Q63HN8 5207 aa2.47□□□□□ -2.01
PRPF4B-205ENST00000480058 FAT1Q14517 4588 aa2.46□□□□□ -2.01
PRPF4B-205ENST00000480058 SSPOA2VEC9 5147 aa2.46□□□□□ -2.02
PRPF4B-205ENST00000480058 BIRC6Q9NR09 4857 aa2.46□□□□□ -2.02
PRPF4B-205ENST00000480058 PLECQ15149 4684 aaKnown RBP2.46□□□□□ -2.02
PRPF4B-205ENST00000480058 FAT3Q8TDW7 4589 aa2.42□□□□□ -2.02
PRPF4B-205ENST00000480058 SPRR5A0A1B0GTR4 108 aa2.41□□□□□ -2.02
PRPF4B-205ENST00000480058 SPEGQ15772 3267 aa2.4□□□□□ -2.03
PRPF4B-205ENST00000480058 DMDP11532 3685 aa2.39□□□□□ -2.03
PRPF4B-205ENST00000480058 DNAH11Q96DT5 4516 aa2.39□□□□□ -2.03
PRPF4B-205ENST00000480058 MT2AP02795 61 aa2.38□□□□□ -2.03
PRPF4B-205ENST00000480058 KRTAP19-8Q3LI54 63 aa2.37□□□□□ -2.03
PRPF4B-205ENST00000480058 DNAH10Q8IVF4 4471 aa2.37□□□□□ -2.03
PRPF4B-205ENST00000480058 DNAH5Q8TE73 4624 aa2.37□□□□□ -2.03
PRPF4B-205ENST00000480058 KRTAP10-5P60370 271 aa2.36□□□□□ -2.03
PRPF4B-205ENST00000480058 HMCN2Q8NDA2 5059 aa2.36□□□□□ -2.03
PRPF4B-205ENST00000480058 CSMD3Q7Z407 3707 aa2.35□□□□□ -2.03
PRPF4B-205ENST00000480058 KRTAP4-5Q9BYR2 181 aa2.34□□□□□ -2.03
PRPF4B-205ENST00000480058 LCE3CQ5T5A8 94 aa2.33□□□□□ -2.04
PRPF4B-205ENST00000480058 KMT2AQ03164 3969 aa2.33□□□□□ -2.04
PRPF4B-205ENST00000480058 MUC2Q02817 5179 aa2.33□□□□□ -2.04
PRPF4B-205ENST00000480058 FAT4Q6V0I7 4981 aa2.32□□□□□ -2.04
PRPF4B-205ENST00000480058 KRTAP4-1Q9BYQ7 146 aa2.31□□□□□ -2.04
PRPF4B-205ENST00000480058 MT1HP80294 61 aa2.3□□□□□ -2.04
PRPF4B-205ENST00000480058 HUWE1Q7Z6Z7 4374 aaKnown RBP2.3□□□□□ -2.04
PRPF4B-205ENST00000480058 LRP1Q07954 4544 aaKnown RBP2.3□□□□□ -2.04
PRPF4B-205ENST00000480058 CRCT1Q9UGL9 99 aa2.3□□□□□ -2.04
PRPF4B-205ENST00000480058 DNAH2Q9P225 4427 aa2.29□□□□□ -2.04
PRPF4B-205ENST00000480058 KRTAP19-1Q8IUB9 90 aa2.29□□□□□ -2.04
PRPF4B-205ENST00000480058 MT1FP04733 61 aa2.27□□□□□ -2.05
PRPF4B-205ENST00000480058 HERC1Q15751 4861 aa2.27□□□□□ -2.05
PRPF4B-205ENST00000480058 KRTAP19-5Q3LI72 72 aa2.24□□□□□ -2.05
PRPF4B-205ENST00000480058 KRTAP10-7P60409 375 aaPredicted RBP2.24□□□□□ -2.05
PRPF4B-205ENST00000480058 DYNC1H1Q14204 4646 aaKnown RBP2.23□□□□□ -2.05
PRPF4B-205ENST00000480058 SACSQ9NZJ4 4579 aa2.23□□□□□ -2.05
PRPF4B-205ENST00000480058 DNAH8Q96JB1 4490 aa2.22□□□□□ -2.05
PRPF4B-205ENST00000480058 ANK2Q01484 3957 aa2.21□□□□□ -2.06
PRPF4B-205ENST00000480058 APOBP04114 4563 aaKnown RBP2.21□□□□□ -2.06
PRPF4B-205ENST00000480058 LRP1BQ9NZR2 4599 aa2.21□□□□□ -2.06
PRPF4B-205ENST00000480058 LYSTQ99698 3801 aa2.21□□□□□ -2.06
PRPF4B-205ENST00000480058 ANK3Q12955 4377 aaKnown RBP2.2□□□□□ -2.06
PRPF4B-205ENST00000480058 MYCBP2O75592 4640 aa2.18□□□□□ -2.06
PRPF4B-205ENST00000480058 MT1GP13640 62 aa2.18□□□□□ -2.06
PRPF4B-205ENST00000480058 TRRAPQ9Y4A5 3859 aa2.18□□□□□ -2.06
PRPF4B-205ENST00000480058 MT1XP80297 61 aa2.16□□□□□ -2.06
PRPF4B-205ENST00000480058 MT1BP07438 61 aa2.16□□□□□ -2.06
PRPF4B-205ENST00000480058 KRTAP12-4P60329 112 aa2.15□□□□□ -2.07
PRPF4B-205ENST00000480058 DNAH17Q9UFH2 4485 aa2.15□□□□□ -2.07
PRPF4B-205ENST00000480058 DNAH3Q8TD57 4116 aa2.14□□□□□ -2.07
PRPF4B-205ENST00000480058 AKAP9Q99996 3911 aa2.12□□□□□ -2.07
PRPF4B-205ENST00000480058 HSPG2P98160 4391 aa2.12□□□□□ -2.07
PRPF4B-205ENST00000480058 SPRR2FQ96RM1 72 aa2.12□□□□□ -2.07
PRPF4B-205ENST00000480058 FCGBPQ9Y6R7 5405 aaPredicted RBP2.12□□□□□ -2.07
PRPF4B-205ENST00000480058 MT1LQ93083 61 aa2.11□□□□□ -2.07
PRPF4B-205ENST00000480058 USH2AO75445 5202 aa2.11□□□□□ -2.07
PRPF4B-205ENST00000480058 DNAH6Q9C0G6 4158 aa2.11□□□□□ -2.07
PRPF4B-205ENST00000480058 LCE3EQ5T5B0 92 aa2.1□□□□□ -2.07
PRPF4B-205ENST00000480058 STARD9Q9P2P6 4700 aa2.1□□□□□ -2.07
PRPF4B-205ENST00000480058 VPS13DQ5THJ4 4388 aa2.09□□□□□ -2.07
PRPF4B-205ENST00000480058 DNAH1Q9P2D7 4330 aa2.09□□□□□ -2.07
PRPF4B-205ENST00000480058 KRTAP9-8Q9BYQ0 159 aa2.09□□□□□ -2.07
PRPF4B-205ENST00000480058 MDN1Q9NU22 5596 aa2.09□□□□□ -2.08
PRPF4B-205ENST00000480058 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
PRPF4B-205ENST00000480058 HERC2O95714 4834 aa2.07□□□□□ -2.08
PRPF4B-205ENST00000480058 ALMS1Q8TCU4 4167 aa2.07□□□□□ -2.08
PRPF4B-205ENST00000480058 KRTAP9-3Q9BYQ3 159 aa2.06□□□□□ -2.08
PRPF4B-205ENST00000480058 LCE2CQ5TA81 110 aa2.05□□□□□ -2.08
PRPF4B-205ENST00000480058 DNAH9Q9NYC9 4486 aa2.03□□□□□ -2.08
PRPF4B-205ENST00000480058 KRTAP19-3Q7Z4W3 81 aa2.02□□□□□ -2.09
PRPF4B-205ENST00000480058 MUC17Q685J3 4493 aa2.01□□□□□ -2.09
PRPF4B-205ENST00000480058 KRTAP19-2Q3LHN2 52 aa2□□□□□ -2.09
PRPF4B-205ENST00000480058 MT1EP04732 61 aa1.99□□□□□ -2.09
PRPF4B-205ENST00000480058 OBSCNQ5VST9 7968 aa1.98□□□□□ -2.09
PRPF4B-205ENST00000480058 PKD1P98161 4303 aa1.98□□□□□ -2.09
PRPF4B-205ENST00000480058 LCE3BQ5TA77 95 aa1.97□□□□□ -2.09
PRPF4B-205ENST00000480058 MT3P25713 68 aa1.96□□□□□ -2.1
PRPF4B-205ENST00000480058 LRP2P98164 4655 aa1.96□□□□□ -2.1
PRPF4B-205ENST00000480058 DYNC2H1Q8NCM8 4307 aaKnown RBP1.96□□□□□ -2.1
PRPF4B-205ENST00000480058 VPS13CQ709C8 3753 aa1.95□□□□□ -2.1
PRPF4B-205ENST00000480058 KMT2DO14686 5537 aa1.94□□□□□ -2.1
PRPF4B-205ENST00000480058 LCE2BO14633 110 aa1.94□□□□□ -2.1
PRPF4B-205ENST00000480058 KRTAP2-3P0C7H8 128 aa1.93□□□□□ -2.1
PRPF4B-205ENST00000480058 KRTAP2-4Q9BYR9 128 aa1.93□□□□□ -2.1
PRPF4B-205ENST00000480058 KRTAP2-1Q9BYU5 128 aa1.93□□□□□ -2.1
PRPF4B-205ENST00000480058 KRTAP4-8A0A0G2JLE6 195 aa1.92□□□□□ -2.1
PRPF4B-205ENST00000480058 KRTAP4-8Q9BYQ9 185 aa1.92□□□□□ -2.1
PRPF4B-205ENST00000480058 SPRR2EP22531 72 aa1.91□□□□□ -2.1
PRPF4B-205ENST00000480058 SPRR2BP35325 72 aa1.91□□□□□ -2.1
PRPF4B-205ENST00000480058 SPRR2AP35326 72 aa1.91□□□□□ -2.1
PRPF4B-205ENST00000480058 MT1MQ8N339 61 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms