RNA–Protein interactions for RNA: ENST00000477487.5

TNRC6A-206, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 2,740 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-206ENST00000477487 LCE2BO14633 110 aa6.54□□□□□ -1.36
TNRC6A-206ENST00000477487 P0C880 135 aa6.54□□□□□ -1.36
TNRC6A-206ENST00000477487 MIR22HGQ0VDD5 57 aa6.53□□□□□ -1.36
TNRC6A-206ENST00000477487 LUZP6Q538Z0 58 aa6.52□□□□□ -1.37
TNRC6A-206ENST00000477487 RPS29P62273 56 aaKnown RBP6.51□□□□□ -1.37
TNRC6A-206ENST00000477487 PCOTHQ58A44 107 aa6.51□□□□□ -1.37
TNRC6A-206ENST00000477487 PCLOQ9Y6V0 5065 aa6.5□□□□□ -1.37
TNRC6A-206ENST00000477487 LPAP08519 4548 aa6.5□□□□□ -1.37
TNRC6A-206ENST00000477487 SPANXA2-OT1Q8N9U9 137 aa6.48□□□□□ -1.37
TNRC6A-206ENST00000477487 SPINK7P58062 85 aa6.45□□□□□ -1.38
TNRC6A-206ENST00000477487 KRTAP13-3Q3SY46 172 aa6.45□□□□□ -1.38
TNRC6A-206ENST00000477487 IGLV7-46A0A075B6I9 117 aa6.43□□□□□ -1.38
TNRC6A-206ENST00000477487 LRP2P98164 4655 aa6.42□□□□□ -1.38
TNRC6A-206ENST00000477487 HERC1Q15751 4861 aa6.38□□□□□ -1.39
TNRC6A-206ENST00000477487 COA5Q86WW8 74 aa6.36□□□□□ -1.39
TNRC6A-206ENST00000477487 NDUFAF8A1L188 74 aa6.36□□□□□ -1.39
TNRC6A-206ENST00000477487 C20orf166-AS1Q96NR2 134 aa6.36□□□□□ -1.39
TNRC6A-206ENST00000477487 IGKV2D-30A0A075B6S6 120 aa6.34□□□□□ -1.4
TNRC6A-206ENST00000477487 A8MUU9 505 aa6.34□□□□□ -1.4
TNRC6A-206ENST00000477487 IGKV2-30P06310 120 aa6.34□□□□□ -1.4
TNRC6A-206ENST00000477487 LINC01558Q9Y6Z2 57 aa6.33□□□□□ -1.4
TNRC6A-206ENST00000477487 XP32Q5T750 250 aa6.32□□□□□ -1.4
TNRC6A-206ENST00000477487 K7ERS5 55 aa6.31□□□□□ -1.4
TNRC6A-206ENST00000477487 HRES1P13985 223 aa6.31□□□□□ -1.4
TNRC6A-206ENST00000477487 ACYP2P14621 99 aa6.23□□□□□ -1.41
TNRC6A-206ENST00000477487 DMAC1Q96GE9 116 aa6.23□□□□□ -1.41
TNRC6A-206ENST00000477487 KRTAP25-1Q3LHN0 102 aa6.23□□□□□ -1.41
TNRC6A-206ENST00000477487 LORP23490 312 aaPredicted RBP6.22□□□□□ -1.41
TNRC6A-206ENST00000477487 RPL37P61927 97 aaKnown RBP6.22□□□□□ -1.41
TNRC6A-206ENST00000477487 TPRXLQ17RH7 258 aa6.19□□□□□ -1.42
TNRC6A-206ENST00000477487 MUC2Q02817 5179 aa6.17□□□□□ -1.42
TNRC6A-206ENST00000477487 HMCN2Q8NDA2 5059 aa6.16□□□□□ -1.42
TNRC6A-206ENST00000477487 CAMK2N1Q7Z7J9 78 aa6.15□□□□□ -1.42
TNRC6A-206ENST00000477487 KRTAP3-1Q9BYR8 98 aa6.13□□□□□ -1.43
TNRC6A-206ENST00000477487 KRTAP4-1Q9BYQ7 146 aa6.11□□□□□ -1.43
TNRC6A-206ENST00000477487 SPATA8Q6RVD6 105 aa6.09□□□□□ -1.43
TNRC6A-206ENST00000477487 MUC17Q685J3 4493 aa6.07□□□□□ -1.44
TNRC6A-206ENST00000477487 SPINT4Q6UDR6 99 aa6.02□□□□□ -1.45
TNRC6A-206ENST00000477487 UBR4Q5T4S7 5183 aa6.02□□□□□ -1.45
TNRC6A-206ENST00000477487 A0A1B0GU69 56 aa6□□□□□ -1.45
TNRC6A-206ENST00000477487 RNF213Q63HN8 5207 aa6□□□□□ -1.45
TNRC6A-206ENST00000477487 UQCR11O14957 56 aa5.98□□□□□ -1.45
TNRC6A-206ENST00000477487 KRTAP15-1Q3LI76 137 aa5.98□□□□□ -1.45
TNRC6A-206ENST00000477487 COX6B2Q6YFQ2 88 aa5.98□□□□□ -1.45
TNRC6A-206ENST00000477487 FAT4Q6V0I7 4981 aa5.89□□□□□ -1.47
TNRC6A-206ENST00000477487 KRTAP19-2Q3LHN2 52 aa5.87□□□□□ -1.47
TNRC6A-206ENST00000477487 H1FX-AS1Q4G0G2 97 aa5.82□□□□□ -1.48
TNRC6A-206ENST00000477487 CRIPTQ9P021 101 aa5.82□□□□□ -1.48
TNRC6A-206ENST00000477487 S4R3F8 94 aa5.81□□□□□ -1.48
TNRC6A-206ENST00000477487 FLGP20930 4061 aaPredicted RBP5.75□□□□□ -1.49
TNRC6A-206ENST00000477487 A0A1B0GU33 70 aa5.74□□□□□ -1.49
TNRC6A-206ENST00000477487 H0YAA0 97 aa5.72□□□□□ -1.49
TNRC6A-206ENST00000477487 KRTAP10-6P60371 365 aaPredicted RBP5.67□□□□□ -1.5
TNRC6A-206ENST00000477487 KRTAP13-4Q3LI77 160 aa5.6□□□□□ -1.51
TNRC6A-206ENST00000477487 MT1HP80294 61 aa5.58□□□□□ -1.52
TNRC6A-206ENST00000477487 A0A0D9SG42 100 aa5.53□□□□□ -1.52
TNRC6A-206ENST00000477487 M0R2T5 61 aa5.5□□□□□ -1.53
TNRC6A-206ENST00000477487 R4GN34 69 aa5.5□□□□□ -1.53
TNRC6A-206ENST00000477487 PRO2289Q9P1D8 64 aa5.46□□□□□ -1.54
TNRC6A-206ENST00000477487 M0QZ58 72 aa5.4□□□□□ -1.55
TNRC6A-206ENST00000477487 KRTAP9-8Q9BYQ0 159 aa5.39□□□□□ -1.55
TNRC6A-206ENST00000477487 MT1FP04733 61 aa5.38□□□□□ -1.55
TNRC6A-206ENST00000477487 MT2AP02795 61 aa5.37□□□□□ -1.55
TNRC6A-206ENST00000477487 KRTAP12-2P59991 146 aa5.37□□□□□ -1.55
TNRC6A-206ENST00000477487 C10orf95Q9H7T3 257 aa5.37□□□□□ -1.55
TNRC6A-206ENST00000477487 KRTAP12-1P59990 96 aa5.34□□□□□ -1.55
TNRC6A-206ENST00000477487 KRTAP10-10P60014 251 aa5.31□□□□□ -1.56
TNRC6A-206ENST00000477487 KRTAP19-1Q8IUB9 90 aa5.27□□□□□ -1.57
TNRC6A-206ENST00000477487 PLAC4Q8WY50 150 aa5.19□□□□□ -1.58
TNRC6A-206ENST00000477487 SPRR2GQ9BYE4 73 aa5.17□□□□□ -1.58
TNRC6A-206ENST00000477487 KRTAP9-3Q9BYQ3 159 aa5.17□□□□□ -1.58
TNRC6A-206ENST00000477487 USH2AO75445 5202 aa5.16□□□□□ -1.58
TNRC6A-206ENST00000477487 MT1BP07438 61 aa5.07□□□□□ -1.6
TNRC6A-206ENST00000477487 FSIP2Q5CZC0 6907 aa5.07□□□□□ -1.6
TNRC6A-206ENST00000477487 KRTAP19-8Q3LI54 63 aa5.03□□□□□ -1.6
TNRC6A-206ENST00000477487 INE1O15225 51 aa4.99□□□□□ -1.61
TNRC6A-206ENST00000477487 KRTAP9-6A0A140TA67 174 aa4.97□□□□□ -1.61
TNRC6A-206ENST00000477487 LCE5AQ5TCM9 118 aa4.92□□□□□ -1.62
TNRC6A-206ENST00000477487 MT1XP80297 61 aa4.91□□□□□ -1.62
TNRC6A-206ENST00000477487 KRTAP10-5P60370 271 aa4.9□□□□□ -1.62
TNRC6A-206ENST00000477487 SSPOA2VEC9 5147 aa4.89□□□□□ -1.63
TNRC6A-206ENST00000477487 KMT2DO14686 5537 aa4.81□□□□□ -1.64
TNRC6A-206ENST00000477487 TNP1P09430 55 aa4.81□□□□□ -1.64
TNRC6A-206ENST00000477487 KRTAP10-7P60409 375 aaPredicted RBP4.78□□□□□ -1.64
TNRC6A-206ENST00000477487 KRTAP9-4Q9BYQ2 154 aa4.78□□□□□ -1.64
TNRC6A-206ENST00000477487 KRTAP19-4Q3LI73 84 aa4.78□□□□□ -1.64
TNRC6A-206ENST00000477487 PP632Q6XCG6 107 aa4.77□□□□□ -1.65
TNRC6A-206ENST00000477487 KRTAP9-2Q9BYQ4 174 aa4.76□□□□□ -1.65
TNRC6A-206ENST00000477487 LCE3AQ5TA76 89 aa4.68□□□□□ -1.66
TNRC6A-206ENST00000477487 KRTAP4-8A0A0G2JLE6 195 aa4.66□□□□□ -1.66
TNRC6A-206ENST00000477487 KRTAP4-8Q9BYQ9 185 aa4.66□□□□□ -1.66
TNRC6A-206ENST00000477487 FCGBPQ9Y6R7 5405 aaPredicted RBP4.65□□□□□ -1.66
TNRC6A-206ENST00000477487 KRTAP19-6Q3LI70 58 aa4.62□□□□□ -1.67
TNRC6A-206ENST00000477487 KRTAP10-12P60413 245 aa4.6□□□□□ -1.67
TNRC6A-206ENST00000477487 KRTAP9-9Q9BYP9 154 aa4.6□□□□□ -1.67
TNRC6A-206ENST00000477487 KRTAP2-2Q9BYT5 123 aa4.54□□□□□ -1.68
TNRC6A-206ENST00000477487 SPRR5A0A1B0GTR4 108 aa4.52□□□□□ -1.69
TNRC6A-206ENST00000477487 KRTAP9-7A8MTY7 169 aa4.49□□□□□ -1.69
TNRC6A-206ENST00000477487 LCE1FQ5T754 118 aa4.48□□□□□ -1.69
TNRC6A-206ENST00000477487 MACF1Q9UPN3 7388 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 2180.3 ms