RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 A0A1B0GVX0 72 aa5.08□□□□□ -1.6
HDAC3-208ENST00000476739 Q8N9L7 120 aa5.08□□□□□ -1.6
HDAC3-208ENST00000476739 A8MWP4 228 aa5.03□□□□□ -1.6
HDAC3-208ENST00000476739 H0Y9P7 68 aa5.02□□□□□ -1.61
HDAC3-208ENST00000476739 LINC01554Q52M75 96 aa5.02□□□□□ -1.61
HDAC3-208ENST00000476739 TP53AIP1Q9HCN2 124 aa5.02□□□□□ -1.61
HDAC3-208ENST00000476739 MT1HP80294 61 aa5.01□□□□□ -1.61
HDAC3-208ENST00000476739 COA5Q86WW8 74 aa5.01□□□□□ -1.61
HDAC3-208ENST00000476739 C8orf17Q9NRJ1 99 aa5.01□□□□□ -1.61
HDAC3-208ENST00000476739 K7EQZ3 153 aa4.99□□□□□ -1.61
HDAC3-208ENST00000476739 H3BS24 57 aa4.98□□□□□ -1.61
HDAC3-208ENST00000476739 MMP24-AS1A0A0U1RRL7 71 aa4.97□□□□□ -1.61
HDAC3-208ENST00000476739 FLGP20930 4061 aaPredicted RBP4.97□□□□□ -1.61
HDAC3-208ENST00000476739 COX6B2Q6YFQ2 88 aa4.96□□□□□ -1.62
HDAC3-208ENST00000476739 MRPL34Q9BQ48 92 aaKnown RBP4.93□□□□□ -1.62
HDAC3-208ENST00000476739 A8MU10 97 aa4.92□□□□□ -1.62
HDAC3-208ENST00000476739 HRES1P13985 223 aa4.92□□□□□ -1.62
HDAC3-208ENST00000476739 WFDC13Q8IUB5 93 aa4.91□□□□□ -1.62
HDAC3-208ENST00000476739 SPINK7P58062 85 aa4.89□□□□□ -1.63
HDAC3-208ENST00000476739 M0R2T5 61 aa4.88□□□□□ -1.63
HDAC3-208ENST00000476739 LORP23490 312 aaPredicted RBP4.88□□□□□ -1.63
HDAC3-208ENST00000476739 KRTAP10-6P60371 365 aaPredicted RBP4.88□□□□□ -1.63
HDAC3-208ENST00000476739 KRTAP9-2Q9BYQ4 174 aa4.88□□□□□ -1.63
HDAC3-208ENST00000476739 SPATA8Q6RVD6 105 aa4.87□□□□□ -1.63
HDAC3-208ENST00000476739 ACYP2P14621 99 aa4.86□□□□□ -1.63
HDAC3-208ENST00000476739 Q5W150 140 aa4.85□□□□□ -1.63
HDAC3-208ENST00000476739 UQCR11O14957 56 aa4.82□□□□□ -1.64
HDAC3-208ENST00000476739 A0A1B0GU69 56 aa4.79□□□□□ -1.64
HDAC3-208ENST00000476739 LCE2DQ5TA82 110 aaPredicted RBP4.79□□□□□ -1.64
HDAC3-208ENST00000476739 IGKV2D-30A0A075B6S6 120 aa4.78□□□□□ -1.64
HDAC3-208ENST00000476739 IGKV2-30P06310 120 aa4.78□□□□□ -1.64
HDAC3-208ENST00000476739 MIR22HGQ0VDD5 57 aa4.78□□□□□ -1.64
HDAC3-208ENST00000476739 PRAC1Q96KF2 57 aa4.76□□□□□ -1.65
HDAC3-208ENST00000476739 KRTAP9-8Q9BYQ0 159 aa4.76□□□□□ -1.65
HDAC3-208ENST00000476739 DMAC1Q96GE9 116 aa4.71□□□□□ -1.66
HDAC3-208ENST00000476739 MT2AP02795 61 aa4.7□□□□□ -1.66
HDAC3-208ENST00000476739 FSIP2Q5CZC0 6907 aa4.7□□□□□ -1.66
HDAC3-208ENST00000476739 CSAG1Q6PB30 78 aa4.69□□□□□ -1.66
HDAC3-208ENST00000476739 MT1FP04733 61 aa4.68□□□□□ -1.66
HDAC3-208ENST00000476739 H1FX-AS1Q4G0G2 97 aa4.68□□□□□ -1.66
HDAC3-208ENST00000476739 KRTAP3-1Q9BYR8 98 aa4.67□□□□□ -1.66
HDAC3-208ENST00000476739 KRTAP9-6A0A140TA67 174 aa4.66□□□□□ -1.66
HDAC3-208ENST00000476739 ROMO1P60602 79 aa4.66□□□□□ -1.66
HDAC3-208ENST00000476739 ADM2Q7Z4H4 148 aa4.66□□□□□ -1.66
HDAC3-208ENST00000476739 KRTAP25-1Q3LHN0 102 aa4.64□□□□□ -1.67
HDAC3-208ENST00000476739 KRTAP10-10P60014 251 aa4.62□□□□□ -1.67
HDAC3-208ENST00000476739 CRCT1Q9UGL9 99 aa4.62□□□□□ -1.67
HDAC3-208ENST00000476739 KRTAP9-3Q9BYQ3 159 aa4.61□□□□□ -1.67
HDAC3-208ENST00000476739 K7ERS5 55 aa4.58□□□□□ -1.68
HDAC3-208ENST00000476739 LCE2BO14633 110 aa4.58□□□□□ -1.68
HDAC3-208ENST00000476739 USH2AO75445 5202 aa4.57□□□□□ -1.68
HDAC3-208ENST00000476739 S4R3F8 94 aa4.55□□□□□ -1.68
HDAC3-208ENST00000476739 KRTAP3-3Q9BYR6 98 aa4.53□□□□□ -1.68
HDAC3-208ENST00000476739 SSPOA2VEC9 5147 aa4.52□□□□□ -1.69
HDAC3-208ENST00000476739 KRTAP19-1Q8IUB9 90 aa4.43□□□□□ -1.7
HDAC3-208ENST00000476739 A0A1B0GU33 70 aa4.42□□□□□ -1.7
HDAC3-208ENST00000476739 A0A0A0MQY5 61 aa4.37□□□□□ -1.71
HDAC3-208ENST00000476739 P0C880 135 aa4.37□□□□□ -1.71
HDAC3-208ENST00000476739 SPINT4Q6UDR6 99 aa4.37□□□□□ -1.71
HDAC3-208ENST00000476739 FCGBPQ9Y6R7 5405 aaPredicted RBP4.36□□□□□ -1.71
HDAC3-208ENST00000476739 H0YAA0 97 aa4.35□□□□□ -1.71
HDAC3-208ENST00000476739 KRTAP19-6Q3LI70 58 aa4.35□□□□□ -1.71
HDAC3-208ENST00000476739 SPRR2GQ9BYE4 73 aa4.35□□□□□ -1.71
HDAC3-208ENST00000476739 MT1BP07438 61 aa4.33□□□□□ -1.72
HDAC3-208ENST00000476739 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.31□□□□□ -1.72
HDAC3-208ENST00000476739 KRTAP19-8Q3LI54 63 aa4.31□□□□□ -1.72
HDAC3-208ENST00000476739 KRTAP15-1Q3LI76 137 aa4.27□□□□□ -1.73
HDAC3-208ENST00000476739 CRIPTQ9P021 101 aa4.27□□□□□ -1.73
HDAC3-208ENST00000476739 MACF1Q9UPN3 7388 aaKnown RBP4.25□□□□□ -1.73
HDAC3-208ENST00000476739 NDUFAF8A1L188 74 aa4.25□□□□□ -1.73
HDAC3-208ENST00000476739 KRTAP3-2Q9BYR7 98 aa4.25□□□□□ -1.73
HDAC3-208ENST00000476739 KRTAP9-7A8MTY7 169 aa4.21□□□□□ -1.74
HDAC3-208ENST00000476739 SYNE2Q8WXH0 6885 aaKnown RBP4.21□□□□□ -1.74
HDAC3-208ENST00000476739 LUZP6Q538Z0 58 aa4.19□□□□□ -1.74
HDAC3-208ENST00000476739 KRTAP10-5P60370 271 aa4.17□□□□□ -1.74
HDAC3-208ENST00000476739 R4GN34 69 aa4.17□□□□□ -1.74
HDAC3-208ENST00000476739 M0QZ58 72 aa4.16□□□□□ -1.74
HDAC3-208ENST00000476739 MT1XP80297 61 aa4.08□□□□□ -1.76
HDAC3-208ENST00000476739 PLAC4Q8WY50 150 aa4.08□□□□□ -1.76
HDAC3-208ENST00000476739 KRTAP6-3Q3LI67 103 aa4.05□□□□□ -1.76
HDAC3-208ENST00000476739 KRTAP13-4Q3LI77 160 aa4.04□□□□□ -1.76
HDAC3-208ENST00000476739 CAMK2N1Q7Z7J9 78 aa4.03□□□□□ -1.76
HDAC3-208ENST00000476739 PRO2289Q9P1D8 64 aa4.01□□□□□ -1.77
HDAC3-208ENST00000476739 KMT2DO14686 5537 aa3.96□□□□□ -1.78
HDAC3-208ENST00000476739 C10orf95Q9H7T3 257 aa3.95□□□□□ -1.78
HDAC3-208ENST00000476739 A0A0D9SG42 100 aa3.94□□□□□ -1.78
HDAC3-208ENST00000476739 KRTAP5-9P26371 169 aa3.93□□□□□ -1.78
HDAC3-208ENST00000476739 PP632Q6XCG6 107 aa3.93□□□□□ -1.78
HDAC3-208ENST00000476739 KRTAP12-2P59991 146 aa3.92□□□□□ -1.78
HDAC3-208ENST00000476739 KRTAP10-7P60409 375 aaPredicted RBP3.92□□□□□ -1.78
HDAC3-208ENST00000476739 MUC12Q9UKN1 5478 aa3.92□□□□□ -1.78
HDAC3-208ENST00000476739 NEBP20929 6669 aa3.91□□□□□ -1.78
HDAC3-208ENST00000476739 KRTAP4-8A0A0G2JLE6 195 aa3.89□□□□□ -1.79
HDAC3-208ENST00000476739 KRTAP4-8Q9BYQ9 185 aa3.89□□□□□ -1.79
HDAC3-208ENST00000476739 KRTAP12-1P59990 96 aa3.88□□□□□ -1.79
HDAC3-208ENST00000476739 KRTAP10-12P60413 245 aa3.86□□□□□ -1.79
HDAC3-208ENST00000476739 KRTAP8-1Q8IUC2 63 aa3.85□□□□□ -1.79
HDAC3-208ENST00000476739 SPRR2FQ96RM1 72 aa3.84□□□□□ -1.79
HDAC3-208ENST00000476739 MDN1Q9NU22 5596 aa3.78□□□□□ -1.8
HDAC3-208ENST00000476739 KRTAP23-1A1A580 65 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms