RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 C7orf65Q6ZTY9 151 aa5.28□□□□□ -1.56
HDAC6-219ENST00000476625 hDV103S1A0JD37 113 aa5.27□□□□□ -1.57
HDAC6-219ENST00000476625 KRTAP3-1Q9BYR8 98 aa5.27□□□□□ -1.57
HDAC6-219ENST00000476625 LINC00643Q86TS7 51 aa5.26□□□□□ -1.57
HDAC6-219ENST00000476625 CASC2Q6XLA1 102 aa5.24□□□□□ -1.57
HDAC6-219ENST00000476625 K7ERU9 68 aa5.23□□□□□ -1.57
HDAC6-219ENST00000476625 HCG22E2RYF7 251 aa5.22□□□□□ -1.57
HDAC6-219ENST00000476625 SPRR2EP22531 72 aa5.22□□□□□ -1.57
HDAC6-219ENST00000476625 SPRR2BP35325 72 aa5.22□□□□□ -1.57
HDAC6-219ENST00000476625 SPRR2AP35326 72 aa5.22□□□□□ -1.57
HDAC6-219ENST00000476625 LCA10Q71F78 164 aa5.22□□□□□ -1.57
HDAC6-219ENST00000476625 S4R3F8 94 aa5.22□□□□□ -1.57
HDAC6-219ENST00000476625 SCGB1A1P11684 91 aa5.21□□□□□ -1.58
HDAC6-219ENST00000476625 Q8N9L7 120 aa5.21□□□□□ -1.58
HDAC6-219ENST00000476625 SPRR2FQ96RM1 72 aa5.21□□□□□ -1.58
HDAC6-219ENST00000476625 TP53AIP1Q9HCN2 124 aa5.2□□□□□ -1.58
HDAC6-219ENST00000476625 IMUPQ9GZP8 106 aa5.19□□□□□ -1.58
HDAC6-219ENST00000476625 KLKP1Q107X0 134 aa5.18□□□□□ -1.58
HDAC6-219ENST00000476625 HIST1H4AP62805 103 aaKnown RBP5.16□□□□□ -1.58
HDAC6-219ENST00000476625 CSAG1Q6PB30 78 aa5.16□□□□□ -1.58
HDAC6-219ENST00000476625 C1orf64Q8NEQ6 169 aa5.14□□□□□ -1.59
HDAC6-219ENST00000476625 A0A087WVE0 104 aa5.12□□□□□ -1.59
HDAC6-219ENST00000476625 LCE1AQ5T7P2 110 aa5.1□□□□□ -1.59
HDAC6-219ENST00000476625 KRTAP2-2Q9BYT5 123 aa5.1□□□□□ -1.59
HDAC6-219ENST00000476625 KRTAP2-1Q9BYU5 128 aa5.1□□□□□ -1.59
HDAC6-219ENST00000476625 UQCRQO14949 82 aa5.09□□□□□ -1.59
HDAC6-219ENST00000476625 ATOX1O00244 68 aa5.06□□□□□ -1.6
HDAC6-219ENST00000476625 MT1XP80297 61 aa5.06□□□□□ -1.6
HDAC6-219ENST00000476625 LOC100996750A0A140TA64 210 aa5.05□□□□□ -1.6
HDAC6-219ENST00000476625 KRTAP8-1Q8IUC2 63 aa5.05□□□□□ -1.6
HDAC6-219ENST00000476625 KRTAP4-6Q9BYQ5 205 aa5.05□□□□□ -1.6
HDAC6-219ENST00000476625 TRAV22A0A0B4J277 110 aa5.04□□□□□ -1.6
HDAC6-219ENST00000476625 SPRR2DP22532 72 aa5.04□□□□□ -1.6
HDAC6-219ENST00000476625 SMIM20Q8N5G0 67 aa5.04□□□□□ -1.6
HDAC6-219ENST00000476625 LOC101927531A0A1B0GV80 90 aa5.02□□□□□ -1.61
HDAC6-219ENST00000476625 KRTAP4-8A0A0G2JLE6 195 aa5.01□□□□□ -1.61
HDAC6-219ENST00000476625 MP68P56378 58 aa5.01□□□□□ -1.61
HDAC6-219ENST00000476625 KRTAP4-8Q9BYQ9 185 aa5.01□□□□□ -1.61
HDAC6-219ENST00000476625 H3BPC8 53 aa5□□□□□ -1.61
HDAC6-219ENST00000476625 MT-ATP8P03928 68 aa4.99□□□□□ -1.61
HDAC6-219ENST00000476625 OCR1Q9BZK8 76 aa4.98□□□□□ -1.61
HDAC6-219ENST00000476625 CRIPTQ9P021 101 aa4.98□□□□□ -1.61
HDAC6-219ENST00000476625 H0Y9P7 68 aa4.97□□□□□ -1.61
HDAC6-219ENST00000476625 CYP4F30PQ9H0H9 118 aa4.96□□□□□ -1.62
HDAC6-219ENST00000476625 TRAV7A0A075B6U4 112 aa4.93□□□□□ -1.62
HDAC6-219ENST00000476625 LCE3BQ5TA77 95 aa4.93□□□□□ -1.62
HDAC6-219ENST00000476625 LINC00208Q96KT6 92 aa4.92□□□□□ -1.62
HDAC6-219ENST00000476625 PRO2289Q9P1D8 64 aa4.92□□□□□ -1.62
HDAC6-219ENST00000476625 A8MUN3 132 aa4.9□□□□□ -1.63
HDAC6-219ENST00000476625 KRTAP12-2P59991 146 aa4.9□□□□□ -1.63
HDAC6-219ENST00000476625 ADM2Q7Z4H4 148 aa4.9□□□□□ -1.63
HDAC6-219ENST00000476625 ANAPC13Q9BS18 74 aa4.87□□□□□ -1.63
HDAC6-219ENST00000476625 KRTAP10-7P60409 375 aaPredicted RBP4.86□□□□□ -1.63
HDAC6-219ENST00000476625 SERP2Q8N6R1 65 aa4.85□□□□□ -1.63
HDAC6-219ENST00000476625 PLAC4Q8WY50 150 aa4.85□□□□□ -1.63
HDAC6-219ENST00000476625 H0YAA0 97 aa4.84□□□□□ -1.63
HDAC6-219ENST00000476625 KRTAP19-4Q3LI73 84 aa4.83□□□□□ -1.64
HDAC6-219ENST00000476625 NDUFC1O43677 76 aa4.81□□□□□ -1.64
HDAC6-219ENST00000476625 GPR98Q8WXG9 6306 aa4.8□□□□□ -1.64
HDAC6-219ENST00000476625 CCDC179H3BU77 68 aa4.78□□□□□ -1.64
HDAC6-219ENST00000476625 P0C880 135 aa4.78□□□□□ -1.64
HDAC6-219ENST00000476625 COX7CP15954 63 aa4.76□□□□□ -1.65
HDAC6-219ENST00000476625 KRTAP4-9Q9BYQ8 210 aa4.76□□□□□ -1.65
HDAC6-219ENST00000476625 ACYP2P14621 99 aa4.74□□□□□ -1.65
HDAC6-219ENST00000476625 KRTAP10-12P60413 245 aa4.74□□□□□ -1.65
HDAC6-219ENST00000476625 C20orf197Q8N268 126 aa4.74□□□□□ -1.65
HDAC6-219ENST00000476625 SPANXA2-OT1Q8N9U9 137 aa4.74□□□□□ -1.65
HDAC6-219ENST00000476625 DMAC1Q96GE9 116 aa4.74□□□□□ -1.65
HDAC6-219ENST00000476625 KRTAP4-12Q9BQ66 201 aa4.74□□□□□ -1.65
HDAC6-219ENST00000476625 M0QZ58 72 aa4.73□□□□□ -1.65
HDAC6-219ENST00000476625 RPS28P62857 69 aaKnown RBP4.73□□□□□ -1.65
HDAC6-219ENST00000476625 R4GN34 69 aa4.73□□□□□ -1.65
HDAC6-219ENST00000476625 KRTAP23-1A1A580 65 aa4.72□□□□□ -1.65
HDAC6-219ENST00000476625 LINC01554Q52M75 96 aa4.72□□□□□ -1.65
HDAC6-219ENST00000476625 SNURFQ9Y675 71 aa4.71□□□□□ -1.66
HDAC6-219ENST00000476625 DSTQ03001 7570 aaKnown RBP4.69□□□□□ -1.66
HDAC6-219ENST00000476625 SPTSSBQ8NFR3 76 aa4.69□□□□□ -1.66
HDAC6-219ENST00000476625 CHKB-CPT1BH3BT56 60 aa4.63□□□□□ -1.67
HDAC6-219ENST00000476625 H7BZZ5 65 aa4.59□□□□□ -1.67
HDAC6-219ENST00000476625 TMEM258P61165 79 aa4.59□□□□□ -1.67
HDAC6-219ENST00000476625 LCE4AQ5TA78 99 aa4.58□□□□□ -1.68
HDAC6-219ENST00000476625 ATP5EP56381 51 aaPredicted RBP4.57□□□□□ -1.68
HDAC6-219ENST00000476625 LCE1DQ5T752 114 aa4.56□□□□□ -1.68
HDAC6-219ENST00000476625 LCE5AQ5TCM9 118 aa4.55□□□□□ -1.68
HDAC6-219ENST00000476625 KRTAP19-7Q3SYF9 63 aa4.53□□□□□ -1.68
HDAC6-219ENST00000476625 COA5Q86WW8 74 aa4.52□□□□□ -1.69
HDAC6-219ENST00000476625 MT1EP04732 61 aa4.49□□□□□ -1.69
HDAC6-219ENST00000476625 MT4P47944 62 aa4.49□□□□□ -1.69
HDAC6-219ENST00000476625 KRTAP19-3Q7Z4W3 81 aa4.49□□□□□ -1.69
HDAC6-219ENST00000476625 PRO0628Q9UI54 55 aa4.49□□□□□ -1.69
HDAC6-219ENST00000476625 CYSTM1Q9H1C7 97 aa4.48□□□□□ -1.69
HDAC6-219ENST00000476625 SEC61GP60059 68 aa4.47□□□□□ -1.69
HDAC6-219ENST00000476625 KRTAP9-9Q9BYP9 154 aa4.47□□□□□ -1.69
HDAC6-219ENST00000476625 KRTAP9-4Q9BYQ2 154 aa4.47□□□□□ -1.69
HDAC6-219ENST00000476625 SERP1Q9Y6X1 66 aa4.47□□□□□ -1.69
HDAC6-219ENST00000476625 HMCN1Q96RW7 5635 aa4.43□□□□□ -1.7
HDAC6-219ENST00000476625 SMIM26A0A096LP01 95 aa4.43□□□□□ -1.7
HDAC6-219ENST00000476625 AHNAK2Q8IVF2 5795 aa4.39□□□□□ -1.71
HDAC6-219ENST00000476625 KRTAP5-10Q6L8G5 202 aa4.38□□□□□ -1.71
HDAC6-219ENST00000476625 KRTAP13-4Q3LI77 160 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms