RNA–Protein interactions for RNA: ENST00000476289.5

CHKB-207, Transcript of choline kinase beta, humanhuman

TSL 5

Gene CHKB, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-207ENST00000476289 Q5VV11 94 aa14.4□□□□□ -0.1
CHKB-207ENST00000476289 H0Y9P7 68 aa14.39□□□□□ -0.11
CHKB-207ENST00000476289 ATOX1O00244 68 aa14.33□□□□□ -0.12
CHKB-207ENST00000476289 LINC00643Q86TS7 51 aa14.31□□□□□ -0.12
CHKB-207ENST00000476289 A6NN06 94 aa14.29□□□□□ -0.12
CHKB-207ENST00000476289 KRTAP6-3Q3LI67 103 aa14.29□□□□□ -0.12
CHKB-207ENST00000476289 A0A1B0GV90 55 aa14.18□□□□□ -0.14
CHKB-207ENST00000476289 NDUFC1O43677 76 aa14.16□□□□□ -0.14
CHKB-207ENST00000476289 LINC00208Q96KT6 92 aa14.16□□□□□ -0.14
CHKB-207ENST00000476289 IMUPQ9GZP8 106 aa14.16□□□□□ -0.14
CHKB-207ENST00000476289 CRIPTQ9P021 101 aa14.16□□□□□ -0.14
CHKB-207ENST00000476289 KRTAP10-5P60370 271 aa14.14□□□□□ -0.15
CHKB-207ENST00000476289 OCR1Q9BZK8 76 aa14.12□□□□□ -0.15
CHKB-207ENST00000476289 A8MUN3 132 aa14.09□□□□□ -0.15
CHKB-207ENST00000476289 H0YAA0 97 aa14.08□□□□□ -0.16
CHKB-207ENST00000476289 MP68P56378 58 aa14.02□□□□□ -0.17
CHKB-207ENST00000476289 ADM2Q7Z4H4 148 aa13.95□□□□□ -0.18
CHKB-207ENST00000476289 J3QR89 54 aa13.83□□□□□ -0.2
CHKB-207ENST00000476289 H3BPC8 53 aa13.8□□□□□ -0.2
CHKB-207ENST00000476289 NEBP20929 6669 aa13.77□□□□□ -0.2
CHKB-207ENST00000476289 MUC12Q9UKN1 5478 aa13.75□□□□□ -0.21
CHKB-207ENST00000476289 SCGB1A1P11684 91 aa13.72□□□□□ -0.21
CHKB-207ENST00000476289 DMAC1Q96GE9 116 aa13.72□□□□□ -0.21
CHKB-207ENST00000476289 P0C880 135 aa13.66□□□□□ -0.22
CHKB-207ENST00000476289 KRTAP5-9P26371 169 aa13.64□□□□□ -0.23
CHKB-207ENST00000476289 R4GN34 69 aa13.57□□□□□ -0.24
CHKB-207ENST00000476289 MT1XP80297 61 aa13.56□□□□□ -0.24
CHKB-207ENST00000476289 C20orf197Q8N268 126 aa13.53□□□□□ -0.24
CHKB-207ENST00000476289 KRTAP3-2Q9BYR7 98 aa13.53□□□□□ -0.24
CHKB-207ENST00000476289 KMT2DO14686 5537 aa13.53□□□□□ -0.24
CHKB-207ENST00000476289 PLAC4Q8WY50 150 aa13.51□□□□□ -0.25
CHKB-207ENST00000476289 PRO2289Q9P1D8 64 aa13.5□□□□□ -0.25
CHKB-207ENST00000476289 M0QZ58 72 aa13.49□□□□□ -0.25
CHKB-207ENST00000476289 MT-ATP8P03928 68 aa13.46□□□□□ -0.25
CHKB-207ENST00000476289 MDN1Q9NU22 5596 aa13.39□□□□□ -0.27
CHKB-207ENST00000476289 TRAV7A0A075B6U4 112 aa13.39□□□□□ -0.27
CHKB-207ENST00000476289 ACYP2P14621 99 aa13.32□□□□□ -0.28
CHKB-207ENST00000476289 LINC01554Q52M75 96 aa13.31□□□□□ -0.28
CHKB-207ENST00000476289 SMIM20Q8N5G0 67 aa13.3□□□□□ -0.28
CHKB-207ENST00000476289 K7ERU9 68 aa13.28□□□□□ -0.28
CHKB-207ENST00000476289 KRTAP20-1Q3LI63 56 aa13.27□□□□□ -0.29
CHKB-207ENST00000476289 SPRR2FQ96RM1 72 aa13.22□□□□□ -0.29
CHKB-207ENST00000476289 KRTAP12-2P59991 146 aa13.2□□□□□ -0.3
CHKB-207ENST00000476289 SPTSSBQ8NFR3 76 aa13.15□□□□□ -0.3
CHKB-207ENST00000476289 KRTAP8-1Q8IUC2 63 aa13.14□□□□□ -0.31
CHKB-207ENST00000476289 SNURFQ9Y675 71 aa13.13□□□□□ -0.31
CHKB-207ENST00000476289 CHKB-CPT1BH3BT56 60 aa13.08□□□□□ -0.32
CHKB-207ENST00000476289 SPRR2EP22531 72 aa13.04□□□□□ -0.32
CHKB-207ENST00000476289 SPRR2BP35325 72 aa13.04□□□□□ -0.32
CHKB-207ENST00000476289 SPRR2AP35326 72 aa13.04□□□□□ -0.32
CHKB-207ENST00000476289 KRTAP4-8A0A0G2JLE6 195 aa13.01□□□□□ -0.33
CHKB-207ENST00000476289 KRTAP4-8Q9BYQ9 185 aa13.01□□□□□ -0.33
CHKB-207ENST00000476289 KRTAP10-7P60409 375 aaPredicted RBP12.95□□□□□ -0.34
CHKB-207ENST00000476289 SPANXA2-OT1Q8N9U9 137 aa12.93□□□□□ -0.34
CHKB-207ENST00000476289 KRTAP2-3P0C7H8 128 aa12.89□□□□□ -0.35
CHKB-207ENST00000476289 KRTAP2-4Q9BYR9 128 aa12.89□□□□□ -0.35
CHKB-207ENST00000476289 LCE1AQ5T7P2 110 aa12.88□□□□□ -0.35
CHKB-207ENST00000476289 SERP2Q8N6R1 65 aa12.86□□□□□ -0.35
CHKB-207ENST00000476289 KRTAP10-12P60413 245 aa12.85□□□□□ -0.35
CHKB-207ENST00000476289 KRTAP13-4Q3LI77 160 aa12.75□□□□□ -0.37
CHKB-207ENST00000476289 SPRR2DP22532 72 aa12.6□□□□□ -0.39
CHKB-207ENST00000476289 COA5Q86WW8 74 aa12.6□□□□□ -0.39
CHKB-207ENST00000476289 KRTAP2-2Q9BYT5 123 aa12.48□□□□□ -0.41
CHKB-207ENST00000476289 KRTAP2-1Q9BYU5 128 aa12.48□□□□□ -0.41
CHKB-207ENST00000476289 CAMK2N1Q7Z7J9 78 aa12.47□□□□□ -0.41
CHKB-207ENST00000476289 COX7CP15954 63 aa12.43□□□□□ -0.42
CHKB-207ENST00000476289 CYSTM1Q9H1C7 97 aa12.36□□□□□ -0.43
CHKB-207ENST00000476289 SEC61GP60059 68 aa12.34□□□□□ -0.43
CHKB-207ENST00000476289 SERP1Q9Y6X1 66 aa12.33□□□□□ -0.44
CHKB-207ENST00000476289 A0A0D9SG42 100 aa12.31□□□□□ -0.44
CHKB-207ENST00000476289 H7BZZ5 65 aa12.31□□□□□ -0.44
CHKB-207ENST00000476289 SPATA8Q6RVD6 105 aa12.28□□□□□ -0.44
CHKB-207ENST00000476289 LCE3BQ5TA77 95 aa12.26□□□□□ -0.45
CHKB-207ENST00000476289 A0A1B0GU33 70 aa12.19□□□□□ -0.46
CHKB-207ENST00000476289 KRTAP19-7Q3SYF9 63 aa12.12□□□□□ -0.47
CHKB-207ENST00000476289 SPINT4Q6UDR6 99 aa12.11□□□□□ -0.47
CHKB-207ENST00000476289 KRTAP12-1P59990 96 aa12.07□□□□□ -0.48
CHKB-207ENST00000476289 MT1EP04732 61 aa12.02□□□□□ -0.49
CHKB-207ENST00000476289 LCE5AQ5TCM9 118 aa11.96□□□□□ -0.49
CHKB-207ENST00000476289 A0A1B0GU69 56 aa11.93□□□□□ -0.5
CHKB-207ENST00000476289 ANAPC13Q9BS18 74 aa11.92□□□□□ -0.5
CHKB-207ENST00000476289 KRTAP19-3Q7Z4W3 81 aa11.91□□□□□ -0.5
CHKB-207ENST00000476289 SMIM26A0A096LP01 95 aa11.82□□□□□ -0.52
CHKB-207ENST00000476289 A8MU10 97 aa11.82□□□□□ -0.52
CHKB-207ENST00000476289 KRTAP19-5Q3LI72 72 aa11.79□□□□□ -0.52
CHKB-207ENST00000476289 DSTQ03001 7570 aaKnown RBP11.78□□□□□ -0.52
CHKB-207ENST00000476289 CCDC179H3BU77 68 aa11.75□□□□□ -0.53
CHKB-207ENST00000476289 MT1GP13640 62 aa11.59□□□□□ -0.55
CHKB-207ENST00000476289 ATP5EP56381 51 aaPredicted RBP11.56□□□□□ -0.56
CHKB-207ENST00000476289 C10orf95Q9H7T3 257 aa11.56□□□□□ -0.56
CHKB-207ENST00000476289 LCE3AQ5TA76 89 aa11.5□□□□□ -0.57
CHKB-207ENST00000476289 PRR15LQ9BU68 103 aa11.5□□□□□ -0.57
CHKB-207ENST00000476289 PP632Q6XCG6 107 aa11.47□□□□□ -0.57
CHKB-207ENST00000476289 MT1LQ93083 61 aa11.47□□□□□ -0.57
CHKB-207ENST00000476289 TNP1P09430 55 aa11.46□□□□□ -0.57
CHKB-207ENST00000476289 KRTAP4-9Q9BYQ8 210 aa11.45□□□□□ -0.58
CHKB-207ENST00000476289 MT1MQ8N339 61 aa11.44□□□□□ -0.58
CHKB-207ENST00000476289 LINC01558Q9Y6Z2 57 aa11.43□□□□□ -0.58
CHKB-207ENST00000476289 TMEM258P61165 79 aa11.24□□□□□ -0.61
CHKB-207ENST00000476289 KRTAP4-3Q9BYR4 195 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms