RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 GPR98Q8WXG9 6306 aa6.59□□□□□ -1.36
ITGB1-211ENST00000475184 A8MUN3 132 aa6.56□□□□□ -1.36
ITGB1-211ENST00000475184 KRTAP4-8A0A0G2JLE6 195 aa6.55□□□□□ -1.36
ITGB1-211ENST00000475184 KRTAP4-8Q9BYQ9 185 aa6.55□□□□□ -1.36
ITGB1-211ENST00000475184 H0YAA0 97 aa6.54□□□□□ -1.36
ITGB1-211ENST00000475184 M0R143 59 aa6.54□□□□□ -1.36
ITGB1-211ENST00000475184 PLAC4Q8WY50 150 aa6.53□□□□□ -1.36
ITGB1-211ENST00000475184 H3BT86 120 aa6.52□□□□□ -1.37
ITGB1-211ENST00000475184 TP53AIP1Q9HCN2 124 aa6.5□□□□□ -1.37
ITGB1-211ENST00000475184 TSTD3H0UI37 97 aa6.49□□□□□ -1.37
ITGB1-211ENST00000475184 CYP4F30PQ9H0H9 118 aa6.47□□□□□ -1.37
ITGB1-211ENST00000475184 LOC100996750A0A140TA64 210 aa6.46□□□□□ -1.38
ITGB1-211ENST00000475184 NDUFC1O43677 76 aa6.46□□□□□ -1.38
ITGB1-211ENST00000475184 ADM2Q7Z4H4 148 aa6.46□□□□□ -1.38
ITGB1-211ENST00000475184 KRTAP4-6Q9BYQ5 205 aa6.46□□□□□ -1.38
ITGB1-211ENST00000475184 UBL5Q9BZL1 73 aa6.41□□□□□ -1.38
ITGB1-211ENST00000475184 K7EP34 96 aa6.38□□□□□ -1.39
ITGB1-211ENST00000475184 KRTAP10-7P60409 375 aaPredicted RBP6.36□□□□□ -1.39
ITGB1-211ENST00000475184 R4GN34 69 aa6.35□□□□□ -1.39
ITGB1-211ENST00000475184 LOC101927531A0A1B0GV80 90 aa6.34□□□□□ -1.39
ITGB1-211ENST00000475184 DSTQ03001 7570 aaKnown RBP6.33□□□□□ -1.4
ITGB1-211ENST00000475184 KRTAP10-12P60413 245 aa6.33□□□□□ -1.4
ITGB1-211ENST00000475184 TRAV22A0A0B4J277 110 aa6.31□□□□□ -1.4
ITGB1-211ENST00000475184 A0A1W2PPM0 123 aa6.31□□□□□ -1.4
ITGB1-211ENST00000475184 BATFQ16520 125 aa6.31□□□□□ -1.4
ITGB1-211ENST00000475184 C9orf118A6NHY6 69 aa6.3□□□□□ -1.4
ITGB1-211ENST00000475184 KRTAP4-9Q9BYQ8 210 aa6.28□□□□□ -1.4
ITGB1-211ENST00000475184 M0QZ58 72 aa6.27□□□□□ -1.41
ITGB1-211ENST00000475184 ACYP1P07311 99 aa6.26□□□□□ -1.41
ITGB1-211ENST00000475184 P0C880 135 aa6.25□□□□□ -1.41
ITGB1-211ENST00000475184 TMA7Q9Y2S6 64 aaKnown RBP6.25□□□□□ -1.41
ITGB1-211ENST00000475184 C20orf197Q8N268 126 aa6.24□□□□□ -1.41
ITGB1-211ENST00000475184 SPCS1Q9Y6A9 102 aa6.24□□□□□ -1.41
ITGB1-211ENST00000475184 H3BS24 57 aa6.23□□□□□ -1.41
ITGB1-211ENST00000475184 TAX1BP3O14907 124 aa6.23□□□□□ -1.41
ITGB1-211ENST00000475184 LINC01554Q52M75 96 aa6.22□□□□□ -1.41
ITGB1-211ENST00000475184 H0Y9P7 68 aa6.14□□□□□ -1.43
ITGB1-211ENST00000475184 ATOX1O00244 68 aa6.14□□□□□ -1.43
ITGB1-211ENST00000475184 PRO0461Q9UI25 63 aa6.11□□□□□ -1.43
ITGB1-211ENST00000475184 UQCRQO14949 82 aa6.1□□□□□ -1.43
ITGB1-211ENST00000475184 LCE5AQ5TCM9 118 aa6.09□□□□□ -1.43
ITGB1-211ENST00000475184 SMIM6P0DI80 62 aa6.08□□□□□ -1.44
ITGB1-211ENST00000475184 LCE1DQ5T752 114 aa6.08□□□□□ -1.44
ITGB1-211ENST00000475184 HMCN1Q96RW7 5635 aa6.04□□□□□ -1.44
ITGB1-211ENST00000475184 KRTAP19-3Q7Z4W3 81 aa6□□□□□ -1.45
ITGB1-211ENST00000475184 AHNAK2Q8IVF2 5795 aa6□□□□□ -1.45
ITGB1-211ENST00000475184 LINC00208Q96KT6 92 aa5.99□□□□□ -1.45
ITGB1-211ENST00000475184 MT-ATP8P03928 68 aa5.98□□□□□ -1.45
ITGB1-211ENST00000475184 KRTAP19-7Q3SYF9 63 aa5.97□□□□□ -1.45
ITGB1-211ENST00000475184 MT1EP04732 61 aa5.95□□□□□ -1.46
ITGB1-211ENST00000475184 MT4P47944 62 aa5.95□□□□□ -1.46
ITGB1-211ENST00000475184 HIST1H4AP62805 103 aaKnown RBP5.94□□□□□ -1.46
ITGB1-211ENST00000475184 LCE4AQ5TA78 99 aa5.92□□□□□ -1.46
ITGB1-211ENST00000475184 KRTAP5-10Q6L8G5 202 aa5.91□□□□□ -1.46
ITGB1-211ENST00000475184 CYSTM1Q9H1C7 97 aa5.91□□□□□ -1.46
ITGB1-211ENST00000475184 ETDBQ3ZM63 59 aa5.9□□□□□ -1.46
ITGB1-211ENST00000475184 ATP5EP2Q5VTU8 51 aa5.88□□□□□ -1.47
ITGB1-211ENST00000475184 DMAC1Q96GE9 116 aa5.88□□□□□ -1.47
ITGB1-211ENST00000475184 MP68P56378 58 aa5.87□□□□□ -1.47
ITGB1-211ENST00000475184 COL5A1-AS1Q5SY13 56 aa5.84□□□□□ -1.47
ITGB1-211ENST00000475184 F8W1H4 67 aa5.83□□□□□ -1.48
ITGB1-211ENST00000475184 GTF2H5Q6ZYL4 71 aa5.8□□□□□ -1.48
ITGB1-211ENST00000475184 MT1GP13640 62 aa5.79□□□□□ -1.48
ITGB1-211ENST00000475184 OCR1Q9BZK8 76 aa5.79□□□□□ -1.48
ITGB1-211ENST00000475184 PP632Q6XCG6 107 aa5.76□□□□□ -1.49
ITGB1-211ENST00000475184 CAMK2N1Q7Z7J9 78 aa5.76□□□□□ -1.49
ITGB1-211ENST00000475184 TRAV7A0A075B6U4 112 aa5.74□□□□□ -1.49
ITGB1-211ENST00000475184 FAM240AA0A1B0GVK7 77 aa5.74□□□□□ -1.49
ITGB1-211ENST00000475184 KRTAP5-7Q6L8G8 165 aa5.74□□□□□ -1.49
ITGB1-211ENST00000475184 KRTAP5-4Q6L8H1 288 aa5.73□□□□□ -1.49
ITGB1-211ENST00000475184 H3BPC8 53 aa5.71□□□□□ -1.5
ITGB1-211ENST00000475184 MT1MQ8N339 61 aa5.7□□□□□ -1.5
ITGB1-211ENST00000475184 KRTAP19-5Q3LI72 72 aa5.69□□□□□ -1.5
ITGB1-211ENST00000475184 SPTSSBQ8NFR3 76 aa5.67□□□□□ -1.5
ITGB1-211ENST00000475184 KRTAP5-3Q6L8H2 238 aa5.65□□□□□ -1.5
ITGB1-211ENST00000475184 A0A0D9SG42 100 aa5.63□□□□□ -1.51
ITGB1-211ENST00000475184 ACYP2P14621 99 aa5.63□□□□□ -1.51
ITGB1-211ENST00000475184 KRTAP13-4Q3LI77 160 aa5.63□□□□□ -1.51
ITGB1-211ENST00000475184 LINC00643Q86TS7 51 aa5.63□□□□□ -1.51
ITGB1-211ENST00000475184 MT1LQ93083 61 aa5.6□□□□□ -1.51
ITGB1-211ENST00000475184 KRTAP4-3Q9BYR4 195 aa5.59□□□□□ -1.51
ITGB1-211ENST00000475184 LOC105371267A0A1B0GV96 52 aa5.58□□□□□ -1.52
ITGB1-211ENST00000475184 KRTAP4-12Q9BQ66 201 aa5.58□□□□□ -1.52
ITGB1-211ENST00000475184 CHKB-CPT1BH3BT56 60 aa5.53□□□□□ -1.52
ITGB1-211ENST00000475184 KRTAP19-4Q3LI73 84 aa5.53□□□□□ -1.52
ITGB1-211ENST00000475184 KRTAP9-9Q9BYP9 154 aa5.52□□□□□ -1.53
ITGB1-211ENST00000475184 KRTAP9-4Q9BYQ2 154 aa5.52□□□□□ -1.53
ITGB1-211ENST00000475184 SPRR5A0A1B0GTR4 108 aa5.51□□□□□ -1.53
ITGB1-211ENST00000475184 SCGB1A1P11684 91 aa5.46□□□□□ -1.54
ITGB1-211ENST00000475184 KRTAP20-2Q3LI61 65 aa5.44□□□□□ -1.54
ITGB1-211ENST00000475184 C10orf95Q9H7T3 257 aa5.37□□□□□ -1.55
ITGB1-211ENST00000475184 SPINT4Q6UDR6 99 aa5.35□□□□□ -1.55
ITGB1-211ENST00000475184 LCE3AQ5TA76 89 aa5.31□□□□□ -1.56
ITGB1-211ENST00000475184 KRTAP4-7Q9BYR0 210 aa5.31□□□□□ -1.56
ITGB1-211ENST00000475184 KRTAP5-5Q701N2 237 aaPredicted RBP5.28□□□□□ -1.56
ITGB1-211ENST00000475184 PCP4L1A6NKN8 68 aa5.27□□□□□ -1.57
ITGB1-211ENST00000475184 KRTAP12-1P59990 96 aa5.27□□□□□ -1.57
ITGB1-211ENST00000475184 KRTAP12-4P60329 112 aa5.27□□□□□ -1.57
ITGB1-211ENST00000475184 SPATA8Q6RVD6 105 aa5.27□□□□□ -1.57
ITGB1-211ENST00000475184 KRTAP23-1A1A580 65 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms