RNA–Protein interactions for RNA: ENST00000474807.5

DNMT3A-210, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-210ENST00000474807 KRTAP10-5P60370 271 aa8.12□□□□□ -1.11
DNMT3A-210ENST00000474807 NEBP20929 6669 aa8.12□□□□□ -1.11
DNMT3A-210ENST00000474807 FAM240AA0A1B0GVK7 77 aa8.09□□□□□ -1.11
DNMT3A-210ENST00000474807 ATP5EP2Q5VTU8 51 aa8.09□□□□□ -1.11
DNMT3A-210ENST00000474807 CRIPTQ9P021 101 aa8.08□□□□□ -1.12
DNMT3A-210ENST00000474807 UQCRQO14949 82 aa8.06□□□□□ -1.12
DNMT3A-210ENST00000474807 HIST1H4AP62805 103 aaKnown RBP8.06□□□□□ -1.12
DNMT3A-210ENST00000474807 H0Y9P7 68 aa8.04□□□□□ -1.12
DNMT3A-210ENST00000474807 ATOX1O00244 68 aa8.03□□□□□ -1.12
DNMT3A-210ENST00000474807 IMUPQ9GZP8 106 aa8.03□□□□□ -1.12
DNMT3A-210ENST00000474807 H0YAA0 97 aa8□□□□□ -1.13
DNMT3A-210ENST00000474807 NDUFC1O43677 76 aa8□□□□□ -1.13
DNMT3A-210ENST00000474807 A8MUN3 132 aa7.94□□□□□ -1.14
DNMT3A-210ENST00000474807 LINC00643Q86TS7 51 aa7.93□□□□□ -1.14
DNMT3A-210ENST00000474807 KMT2DO14686 5537 aa7.92□□□□□ -1.14
DNMT3A-210ENST00000474807 KRTAP5-9P26371 169 aa7.91□□□□□ -1.14
DNMT3A-210ENST00000474807 MDN1Q9NU22 5596 aa7.91□□□□□ -1.14
DNMT3A-210ENST00000474807 LINC00208Q96KT6 92 aa7.9□□□□□ -1.14
DNMT3A-210ENST00000474807 ADM2Q7Z4H4 148 aa7.88□□□□□ -1.15
DNMT3A-210ENST00000474807 OCR1Q9BZK8 76 aa7.86□□□□□ -1.15
DNMT3A-210ENST00000474807 MP68P56378 58 aa7.83□□□□□ -1.16
DNMT3A-210ENST00000474807 MT1XP80297 61 aa7.74□□□□□ -1.17
DNMT3A-210ENST00000474807 KRTAP20-1Q3LI63 56 aa7.74□□□□□ -1.17
DNMT3A-210ENST00000474807 PRO2289Q9P1D8 64 aa7.73□□□□□ -1.17
DNMT3A-210ENST00000474807 A0A1B0GV90 55 aa7.72□□□□□ -1.17
DNMT3A-210ENST00000474807 H3BPC8 53 aa7.71□□□□□ -1.18
DNMT3A-210ENST00000474807 P0C880 135 aa7.7□□□□□ -1.18
DNMT3A-210ENST00000474807 PLAC4Q8WY50 150 aa7.7□□□□□ -1.18
DNMT3A-210ENST00000474807 R4GN34 69 aa7.69□□□□□ -1.18
DNMT3A-210ENST00000474807 DMAC1Q96GE9 116 aa7.68□□□□□ -1.18
DNMT3A-210ENST00000474807 C20orf197Q8N268 126 aa7.65□□□□□ -1.18
DNMT3A-210ENST00000474807 KRTAP3-2Q9BYR7 98 aa7.63□□□□□ -1.19
DNMT3A-210ENST00000474807 M0QZ58 72 aa7.62□□□□□ -1.19
DNMT3A-210ENST00000474807 SPRR2FQ96RM1 72 aa7.61□□□□□ -1.19
DNMT3A-210ENST00000474807 J3QR89 54 aa7.6□□□□□ -1.19
DNMT3A-210ENST00000474807 SCGB1A1P11684 91 aa7.6□□□□□ -1.19
DNMT3A-210ENST00000474807 KRTAP12-2P59991 146 aa7.58□□□□□ -1.2
DNMT3A-210ENST00000474807 KRTAP8-1Q8IUC2 63 aa7.55□□□□□ -1.2
DNMT3A-210ENST00000474807 KRTAP2-3P0C7H8 128 aa7.52□□□□□ -1.21
DNMT3A-210ENST00000474807 SPRR2EP22531 72 aa7.52□□□□□ -1.21
DNMT3A-210ENST00000474807 SPRR2BP35325 72 aa7.52□□□□□ -1.21
DNMT3A-210ENST00000474807 SPRR2AP35326 72 aa7.52□□□□□ -1.21
DNMT3A-210ENST00000474807 KRTAP2-4Q9BYR9 128 aa7.52□□□□□ -1.21
DNMT3A-210ENST00000474807 TRAV7A0A075B6U4 112 aa7.51□□□□□ -1.21
DNMT3A-210ENST00000474807 LINC01554Q52M75 96 aa7.5□□□□□ -1.21
DNMT3A-210ENST00000474807 KRTAP4-8A0A0G2JLE6 195 aa7.46□□□□□ -1.22
DNMT3A-210ENST00000474807 ACYP2P14621 99 aa7.46□□□□□ -1.22
DNMT3A-210ENST00000474807 KRTAP4-8Q9BYQ9 185 aa7.46□□□□□ -1.22
DNMT3A-210ENST00000474807 LCE1AQ5T7P2 110 aa7.44□□□□□ -1.22
DNMT3A-210ENST00000474807 KRTAP10-7P60409 375 aaPredicted RBP7.39□□□□□ -1.23
DNMT3A-210ENST00000474807 MT-ATP8P03928 68 aa7.38□□□□□ -1.23
DNMT3A-210ENST00000474807 SMIM20Q8N5G0 67 aa7.37□□□□□ -1.23
DNMT3A-210ENST00000474807 SPTSSBQ8NFR3 76 aa7.37□□□□□ -1.23
DNMT3A-210ENST00000474807 KRTAP10-12P60413 245 aa7.36□□□□□ -1.23
DNMT3A-210ENST00000474807 CHKB-CPT1BH3BT56 60 aa7.29□□□□□ -1.24
DNMT3A-210ENST00000474807 KRTAP2-2Q9BYT5 123 aa7.28□□□□□ -1.24
DNMT3A-210ENST00000474807 KRTAP2-1Q9BYU5 128 aa7.28□□□□□ -1.24
DNMT3A-210ENST00000474807 SPRR2DP22532 72 aa7.27□□□□□ -1.25
DNMT3A-210ENST00000474807 K7ERU9 68 aa7.26□□□□□ -1.25
DNMT3A-210ENST00000474807 SNURFQ9Y675 71 aa7.25□□□□□ -1.25
DNMT3A-210ENST00000474807 SPANXA2-OT1Q8N9U9 137 aa7.19□□□□□ -1.26
DNMT3A-210ENST00000474807 KRTAP13-4Q3LI77 160 aa7.16□□□□□ -1.26
DNMT3A-210ENST00000474807 LCE3BQ5TA77 95 aa7.1□□□□□ -1.27
DNMT3A-210ENST00000474807 SERP2Q8N6R1 65 aa7.08□□□□□ -1.28
DNMT3A-210ENST00000474807 CAMK2N1Q7Z7J9 78 aa7.04□□□□□ -1.28
DNMT3A-210ENST00000474807 COA5Q86WW8 74 aa6.98□□□□□ -1.29
DNMT3A-210ENST00000474807 KRTAP19-7Q3SYF9 63 aa6.93□□□□□ -1.3
DNMT3A-210ENST00000474807 DSTQ03001 7570 aaKnown RBP6.91□□□□□ -1.3
DNMT3A-210ENST00000474807 SEC61GP60059 68 aa6.89□□□□□ -1.31
DNMT3A-210ENST00000474807 SERP1Q9Y6X1 66 aa6.89□□□□□ -1.31
DNMT3A-210ENST00000474807 A0A0D9SG42 100 aa6.88□□□□□ -1.31
DNMT3A-210ENST00000474807 LCE5AQ5TCM9 118 aa6.88□□□□□ -1.31
DNMT3A-210ENST00000474807 MT1EP04732 61 aa6.87□□□□□ -1.31
DNMT3A-210ENST00000474807 SPATA8Q6RVD6 105 aa6.86□□□□□ -1.31
DNMT3A-210ENST00000474807 COX7CP15954 63 aa6.83□□□□□ -1.32
DNMT3A-210ENST00000474807 KRTAP19-3Q7Z4W3 81 aa6.83□□□□□ -1.32
DNMT3A-210ENST00000474807 A0A1B0GU33 70 aa6.81□□□□□ -1.32
DNMT3A-210ENST00000474807 SPINT4Q6UDR6 99 aa6.8□□□□□ -1.32
DNMT3A-210ENST00000474807 H7BZZ5 65 aa6.77□□□□□ -1.33
DNMT3A-210ENST00000474807 KRTAP12-1P59990 96 aa6.77□□□□□ -1.33
DNMT3A-210ENST00000474807 CYSTM1Q9H1C7 97 aa6.77□□□□□ -1.33
DNMT3A-210ENST00000474807 KRTAP19-5Q3LI72 72 aa6.7□□□□□ -1.34
DNMT3A-210ENST00000474807 MT1GP13640 62 aa6.66□□□□□ -1.34
DNMT3A-210ENST00000474807 KRTAP4-9Q9BYQ8 210 aa6.64□□□□□ -1.35
DNMT3A-210ENST00000474807 A0A1B0GU69 56 aa6.63□□□□□ -1.35
DNMT3A-210ENST00000474807 GPR98Q8WXG9 6306 aa6.61□□□□□ -1.35
DNMT3A-210ENST00000474807 SMIM26A0A096LP01 95 aa6.61□□□□□ -1.35
DNMT3A-210ENST00000474807 A8MU10 97 aa6.59□□□□□ -1.35
DNMT3A-210ENST00000474807 PP632Q6XCG6 107 aa6.57□□□□□ -1.36
DNMT3A-210ENST00000474807 MT1MQ8N339 61 aa6.54□□□□□ -1.36
DNMT3A-210ENST00000474807 MT1LQ93083 61 aa6.54□□□□□ -1.36
DNMT3A-210ENST00000474807 C10orf95Q9H7T3 257 aa6.5□□□□□ -1.37
DNMT3A-210ENST00000474807 LCE3AQ5TA76 89 aa6.49□□□□□ -1.37
DNMT3A-210ENST00000474807 TNP1P09430 55 aa6.47□□□□□ -1.37
DNMT3A-210ENST00000474807 LCE1DQ5T752 114 aa6.47□□□□□ -1.37
DNMT3A-210ENST00000474807 ANAPC13Q9BS18 74 aa6.47□□□□□ -1.37
DNMT3A-210ENST00000474807 HMCN1Q96RW7 5635 aa6.46□□□□□ -1.38
DNMT3A-210ENST00000474807 LCE4AQ5TA78 99 aa6.44□□□□□ -1.38
DNMT3A-210ENST00000474807 KRTAP4-3Q9BYR4 195 aa6.4□□□□□ -1.38
DNMT3A-210ENST00000474807 CCDC179H3BU77 68 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms