RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 ATP5EP2Q5VTU8 51 aa7.18□□□□□ -1.26
CALD1-215ENST00000472096 A0A1B0GV90 55 aa7.15□□□□□ -1.26
CALD1-215ENST00000472096 SSPOA2VEC9 5147 aa7.11□□□□□ -1.27
CALD1-215ENST00000472096 HIST1H4AP62805 103 aaKnown RBP7.1□□□□□ -1.27
CALD1-215ENST00000472096 TRAV22A0A0B4J277 110 aa7.09□□□□□ -1.27
CALD1-215ENST00000472096 C1orf64Q8NEQ6 169 aa7.09□□□□□ -1.27
CALD1-215ENST00000472096 LINC00643Q86TS7 51 aa7.07□□□□□ -1.28
CALD1-215ENST00000472096 CYP4F30PQ9H0H9 118 aa7.06□□□□□ -1.28
CALD1-215ENST00000472096 S4R3F8 94 aa7.05□□□□□ -1.28
CALD1-215ENST00000472096 A0A087WVE0 104 aa7.04□□□□□ -1.28
CALD1-215ENST00000472096 LOC101927531A0A1B0GV80 90 aa7.04□□□□□ -1.28
CALD1-215ENST00000472096 C5orf47Q569G3 176 aa7.03□□□□□ -1.28
CALD1-215ENST00000472096 LCE1AQ5T7P2 110 aa7.03□□□□□ -1.28
CALD1-215ENST00000472096 UQCRQO14949 82 aa7.02□□□□□ -1.29
CALD1-215ENST00000472096 LCA10Q71F78 164 aa7□□□□□ -1.29
CALD1-215ENST00000472096 H0Y9P7 68 aa6.99□□□□□ -1.29
CALD1-215ENST00000472096 ATOX1O00244 68 aa6.98□□□□□ -1.29
CALD1-215ENST00000472096 CSAG1Q6PB30 78 aa6.96□□□□□ -1.3
CALD1-215ENST00000472096 J3QR89 54 aa6.94□□□□□ -1.3
CALD1-215ENST00000472096 FCGBPQ9Y6R7 5405 aaPredicted RBP6.93□□□□□ -1.3
CALD1-215ENST00000472096 FAM236AA0A1B0GUQ0 79 aa6.92□□□□□ -1.3
CALD1-215ENST00000472096 FAM236BA0A1B0GV22 79 aa6.92□□□□□ -1.3
CALD1-215ENST00000472096 OCR1Q9BZK8 76 aa6.91□□□□□ -1.3
CALD1-215ENST00000472096 KRTAP19-6Q3LI70 58 aa6.9□□□□□ -1.3
CALD1-215ENST00000472096 LINC00208Q96KT6 92 aa6.87□□□□□ -1.31
CALD1-215ENST00000472096 MP68P56378 58 aa6.85□□□□□ -1.31
CALD1-215ENST00000472096 KLKP1Q107X0 134 aa6.84□□□□□ -1.31
CALD1-215ENST00000472096 A8MUN3 132 aa6.81□□□□□ -1.32
CALD1-215ENST00000472096 SPRR2GQ9BYE4 73 aa6.79□□□□□ -1.32
CALD1-215ENST00000472096 H3BPC8 53 aa6.77□□□□□ -1.33
CALD1-215ENST00000472096 NDUFC1O43677 76 aa6.77□□□□□ -1.33
CALD1-215ENST00000472096 SCGB1A1P11684 91 aa6.76□□□□□ -1.33
CALD1-215ENST00000472096 MT1BP07438 61 aa6.74□□□□□ -1.33
CALD1-215ENST00000472096 KRTAP19-8Q3LI54 63 aa6.74□□□□□ -1.33
CALD1-215ENST00000472096 IMUPQ9GZP8 106 aa6.74□□□□□ -1.33
CALD1-215ENST00000472096 MACF1Q9UPN3 7388 aaKnown RBP6.73□□□□□ -1.33
CALD1-215ENST00000472096 K7ERU9 68 aa6.72□□□□□ -1.33
CALD1-215ENST00000472096 MT-ATP8P03928 68 aa6.72□□□□□ -1.33
CALD1-215ENST00000472096 Q5VV11 94 aa6.72□□□□□ -1.33
CALD1-215ENST00000472096 H0YAA0 97 aa6.71□□□□□ -1.34
CALD1-215ENST00000472096 CRIPTQ9P021 101 aa6.7□□□□□ -1.34
CALD1-215ENST00000472096 KRTAP5-3Q6L8H2 238 aa6.69□□□□□ -1.34
CALD1-215ENST00000472096 DMAC1Q96GE9 116 aa6.67□□□□□ -1.34
CALD1-215ENST00000472096 ADM2Q7Z4H4 148 aa6.63□□□□□ -1.35
CALD1-215ENST00000472096 TRAV7A0A075B6U4 112 aa6.61□□□□□ -1.35
CALD1-215ENST00000472096 SMIM20Q8N5G0 67 aa6.61□□□□□ -1.35
CALD1-215ENST00000472096 A6NN06 94 aa6.6□□□□□ -1.35
CALD1-215ENST00000472096 SYNE2Q8WXH0 6885 aaKnown RBP6.57□□□□□ -1.36
CALD1-215ENST00000472096 KRTAP10-5P60370 271 aa6.56□□□□□ -1.36
CALD1-215ENST00000472096 P0C880 135 aa6.5□□□□□ -1.37
CALD1-215ENST00000472096 PRAC1Q96KF2 57 aa6.5□□□□□ -1.37
CALD1-215ENST00000472096 ACYP2P14621 99 aa6.49□□□□□ -1.37
CALD1-215ENST00000472096 KRTAP6-3Q3LI67 103 aa6.48□□□□□ -1.37
CALD1-215ENST00000472096 C20orf197Q8N268 126 aa6.48□□□□□ -1.37
CALD1-215ENST00000472096 KRTAP2-2Q9BYT5 123 aa6.47□□□□□ -1.37
CALD1-215ENST00000472096 SNURFQ9Y675 71 aa6.47□□□□□ -1.37
CALD1-215ENST00000472096 R4GN34 69 aa6.46□□□□□ -1.38
CALD1-215ENST00000472096 M0QZ58 72 aa6.42□□□□□ -1.38
CALD1-215ENST00000472096 SERP2Q8N6R1 65 aa6.42□□□□□ -1.38
CALD1-215ENST00000472096 MT3P25713 68 aa6.41□□□□□ -1.38
CALD1-215ENST00000472096 SPTSSBQ8NFR3 76 aa6.4□□□□□ -1.38
CALD1-215ENST00000472096 CHKB-CPT1BH3BT56 60 aa6.38□□□□□ -1.39
CALD1-215ENST00000472096 SPANXA2-OT1Q8N9U9 137 aa6.38□□□□□ -1.39
CALD1-215ENST00000472096 PLAC4Q8WY50 150 aa6.36□□□□□ -1.39
CALD1-215ENST00000472096 MT1XP80297 61 aa6.34□□□□□ -1.39
CALD1-215ENST00000472096 PRO2289Q9P1D8 64 aa6.33□□□□□ -1.4
CALD1-215ENST00000472096 LINC01554Q52M75 96 aa6.3□□□□□ -1.4
CALD1-215ENST00000472096 KRTAP5-9P26371 169 aa6.25□□□□□ -1.41
CALD1-215ENST00000472096 COX7CP15954 63 aa6.24□□□□□ -1.41
CALD1-215ENST00000472096 NEBP20929 6669 aa6.22□□□□□ -1.41
CALD1-215ENST00000472096 MUC12Q9UKN1 5478 aa6.22□□□□□ -1.41
CALD1-215ENST00000472096 COA5Q86WW8 74 aa6.2□□□□□ -1.42
CALD1-215ENST00000472096 KRTAP12-2P59991 146 aa6.17□□□□□ -1.42
CALD1-215ENST00000472096 CYSTM1Q9H1C7 97 aa6.16□□□□□ -1.42
CALD1-215ENST00000472096 KMT2DO14686 5537 aa6.15□□□□□ -1.42
CALD1-215ENST00000472096 NDUFAF8A1L188 74 aa6.14□□□□□ -1.43
CALD1-215ENST00000472096 H7BZZ5 65 aa6.14□□□□□ -1.43
CALD1-215ENST00000472096 KRTAP13-4Q3LI77 160 aa6.12□□□□□ -1.43
CALD1-215ENST00000472096 KRTAP8-1Q8IUC2 63 aa6.07□□□□□ -1.44
CALD1-215ENST00000472096 SPRR2FQ96RM1 72 aa6.07□□□□□ -1.44
CALD1-215ENST00000472096 ANAPC13Q9BS18 74 aa6.06□□□□□ -1.44
CALD1-215ENST00000472096 KRTAP10-7P60409 375 aaPredicted RBP6.05□□□□□ -1.44
CALD1-215ENST00000472096 MDN1Q9NU22 5596 aa6.02□□□□□ -1.45
CALD1-215ENST00000472096 SEC61GP60059 68 aa6.02□□□□□ -1.45
CALD1-215ENST00000472096 SERP1Q9Y6X1 66 aa6.02□□□□□ -1.45
CALD1-215ENST00000472096 KRTAP10-12P60413 245 aa6.01□□□□□ -1.45
CALD1-215ENST00000472096 SPRR2EP22531 72 aa5.96□□□□□ -1.46
CALD1-215ENST00000472096 SPRR2BP35325 72 aa5.96□□□□□ -1.46
CALD1-215ENST00000472096 SPRR2AP35326 72 aa5.96□□□□□ -1.46
CALD1-215ENST00000472096 KRTAP20-1Q3LI63 56 aa5.96□□□□□ -1.46
CALD1-215ENST00000472096 CCDC179H3BU77 68 aa5.95□□□□□ -1.46
CALD1-215ENST00000472096 CAMK2N1Q7Z7J9 78 aa5.94□□□□□ -1.46
CALD1-215ENST00000472096 LCE1FQ5T754 118 aa5.93□□□□□ -1.46
CALD1-215ENST00000472096 SPATA8Q6RVD6 105 aa5.93□□□□□ -1.46
CALD1-215ENST00000472096 A0A0D9SG42 100 aa5.92□□□□□ -1.46
CALD1-215ENST00000472096 A0A1B0GU33 70 aa5.92□□□□□ -1.46
CALD1-215ENST00000472096 A0A1B0GU69 56 aa5.87□□□□□ -1.47
CALD1-215ENST00000472096 ATP5EP56381 51 aaPredicted RBP5.86□□□□□ -1.47
CALD1-215ENST00000472096 KRTAP12-1P59990 96 aa5.82□□□□□ -1.48
CALD1-215ENST00000472096 SPINT4Q6UDR6 99 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms