RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 SPTBN1Q01082 2364 aaKnown RBP1.24□□□□□ -2.21
CD46-213ENST00000471987 RPS27P42677 84 aaKnown RBP1.24□□□□□ -2.21
CD46-213ENST00000471987 COX6A2Q02221 97 aa1.24□□□□□ -2.21
CD46-213ENST00000471987 SPINK9Q5DT21 86 aa1.24□□□□□ -2.21
CD46-213ENST00000471987 TACC2O95359 2948 aa1.24□□□□□ -2.21
CD46-213ENST00000471987 FSIP2Q5CZC0 6907 aa1.24□□□□□ -2.21
CD46-213ENST00000471987 NBASA2RRP1 2371 aa1.23□□□□□ -2.21
CD46-213ENST00000471987 AHNAK2Q8IVF2 5795 aa1.23□□□□□ -2.21
CD46-213ENST00000471987 CSMD3Q7Z407 3707 aa1.23□□□□□ -2.21
CD46-213ENST00000471987 K7EIL1 84 aa1.23□□□□□ -2.21
CD46-213ENST00000471987 DEFB131AP59861 70 aa1.23□□□□□ -2.21
CD46-213ENST00000471987 DEFB103AP81534 67 aa1.23□□□□□ -2.21
CD46-213ENST00000471987 H1FX-AS1Q4G0G2 97 aa1.23□□□□□ -2.21
CD46-213ENST00000471987 KNL1Q8NG31 2342 aa1.23□□□□□ -2.21
CD46-213ENST00000471987 M0QY20 66 aa1.22□□□□□ -2.21
CD46-213ENST00000471987 KRTAP5-10Q6L8G5 202 aa1.22□□□□□ -2.21
CD46-213ENST00000471987 C10orf95Q9H7T3 257 aa1.22□□□□□ -2.21
CD46-213ENST00000471987 MYCBP2O75592 4640 aa1.22□□□□□ -2.21
CD46-213ENST00000471987 DYNC1H1Q14204 4646 aaKnown RBP1.22□□□□□ -2.21
CD46-213ENST00000471987 APC2O95996 2303 aa1.22□□□□□ -2.21
CD46-213ENST00000471987 DNAH9Q9NYC9 4486 aa1.21□□□□□ -2.22
CD46-213ENST00000471987 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
CD46-213ENST00000471987 COL7A1Q02388 2944 aa1.21□□□□□ -2.22
CD46-213ENST00000471987 DNAH10Q8IVF4 4471 aa1.21□□□□□ -2.22
CD46-213ENST00000471987 PKHD1P08F94 4074 aa1.21□□□□□ -2.22
CD46-213ENST00000471987 MMP24-AS1A0A0U1RRL7 71 aa1.21□□□□□ -2.22
CD46-213ENST00000471987 DEFB130BP0DP73 79 aa1.21□□□□□ -2.22
CD46-213ENST00000471987 DEFB130AP0DP74 79 aa1.21□□□□□ -2.22
CD46-213ENST00000471987 KAAG1Q9UBP8 84 aa1.21□□□□□ -2.22
CD46-213ENST00000471987 FAT2Q9NYQ8 4349 aa1.21□□□□□ -2.22
CD46-213ENST00000471987 SSPOA2VEC9 5147 aa1.2□□□□□ -2.22
CD46-213ENST00000471987 LELP1Q5T871 98 aa1.2□□□□□ -2.22
CD46-213ENST00000471987 LEAP2Q969E1 77 aa1.2□□□□□ -2.22
CD46-213ENST00000471987 HUWE1Q7Z6Z7 4374 aaKnown RBP1.19□□□□□ -2.22
CD46-213ENST00000471987 PLECQ15149 4684 aaKnown RBP1.19□□□□□ -2.22
CD46-213ENST00000471987 H3BUA1 57 aa1.19□□□□□ -2.22
CD46-213ENST00000471987 WT1-ASQ06250 92 aa1.19□□□□□ -2.22
CD46-213ENST00000471987 HSPG2P98160 4391 aa1.19□□□□□ -2.22
CD46-213ENST00000471987 ACACAQ13085 2346 aa1.18□□□□□ -2.22
CD46-213ENST00000471987 FAT3Q8TDW7 4589 aa1.18□□□□□ -2.22
CD46-213ENST00000471987 USF3Q68DE3 2245 aa1.18□□□□□ -2.22
CD46-213ENST00000471987 Q5VSD8 79 aa1.18□□□□□ -2.22
CD46-213ENST00000471987 PRO0255Q9UI72 69 aa1.18□□□□□ -2.22
CD46-213ENST00000471987 FLG2Q5D862 2391 aaPredicted RBP1.18□□□□□ -2.22
CD46-213ENST00000471987 DNAH7Q8WXX0 4024 aa1.18□□□□□ -2.22
CD46-213ENST00000471987 NEBP20929 6669 aa1.17□□□□□ -2.22
CD46-213ENST00000471987 SPRR1AP35321 89 aa1.17□□□□□ -2.22
CD46-213ENST00000471987 DEFB109BQ30KR1 87 aa1.17□□□□□ -2.22
CD46-213ENST00000471987 TMEM167AQ8TBQ9 72 aa1.17□□□□□ -2.22
CD46-213ENST00000471987 CNTRLQ7Z7A1 2325 aa1.16□□□□□ -2.22
CD46-213ENST00000471987 DEFB105AQ8NG35 78 aa1.16□□□□□ -2.22
CD46-213ENST00000471987 APLNQ9ULZ1 77 aa1.16□□□□□ -2.22
CD46-213ENST00000471987 FAT1Q14517 4588 aa1.16□□□□□ -2.22
CD46-213ENST00000471987 PLCE1Q9P212 2302 aa1.15□□□□□ -2.23
CD46-213ENST00000471987 LRP1BQ9NZR2 4599 aa1.15□□□□□ -2.23
CD46-213ENST00000471987 TOMM7Q9P0U1 55 aa1.15□□□□□ -2.23
CD46-213ENST00000471987 K7EIM0 57 aa1.14□□□□□ -2.23
CD46-213ENST00000471987 CLPSL2Q6UWE3 100 aa1.14□□□□□ -2.23
CD46-213ENST00000471987 WNK2Q9Y3S1 2297 aa1.14□□□□□ -2.23
CD46-213ENST00000471987 SONP18583 2426 aaKnown RBP1.14□□□□□ -2.23
CD46-213ENST00000471987 PKD1P98161 4303 aa1.13□□□□□ -2.23
CD46-213ENST00000471987 VPS13DQ5THJ4 4388 aa1.13□□□□□ -2.23
CD46-213ENST00000471987 A8MTW9 85 aa1.13□□□□□ -2.23
CD46-213ENST00000471987 DEFB106AQ8N104 65 aa1.13□□□□□ -2.23
CD46-213ENST00000471987 DEFB119Q8N690 84 aa1.13□□□□□ -2.23
CD46-213ENST00000471987 SYNE2Q8WXH0 6885 aaKnown RBP1.13□□□□□ -2.23
CD46-213ENST00000471987 DNAH11Q96DT5 4516 aa1.12□□□□□ -2.23
CD46-213ENST00000471987 SPRR1BP22528 89 aa1.12□□□□□ -2.23
CD46-213ENST00000471987 DNAH3Q8TD57 4116 aa1.12□□□□□ -2.23
CD46-213ENST00000471987 DNAH6Q9C0G6 4158 aa1.12□□□□□ -2.23
CD46-213ENST00000471987 LRP1Q07954 4544 aaKnown RBP1.11□□□□□ -2.23
CD46-213ENST00000471987 PRLHP81277 87 aa1.11□□□□□ -2.23
CD46-213ENST00000471987 S4R3F8 94 aa1.11□□□□□ -2.23
CD46-213ENST00000471987 PKDREJQ9NTG1 2253 aa1.11□□□□□ -2.23
CD46-213ENST00000471987 STAB2Q8WWQ8 2551 aa1.11□□□□□ -2.23
CD46-213ENST00000471987 LRP2P98164 4655 aa1.1□□□□□ -2.23
CD46-213ENST00000471987 PKHD1L1Q86WI1 4243 aa1.1□□□□□ -2.23
CD46-213ENST00000471987 STARD9Q9P2P6 4700 aa1.1□□□□□ -2.23
CD46-213ENST00000471987 RPL39P5Q59GN2 51 aa1.1□□□□□ -2.23
CD46-213ENST00000471987 DNAH5Q8TE73 4624 aa1.1□□□□□ -2.23
CD46-213ENST00000471987 ROS1P08922 2347 aa1.1□□□□□ -2.23
CD46-213ENST00000471987 DEFB104AQ8WTQ1 72 aa1.09□□□□□ -2.23
CD46-213ENST00000471987 NOP10Q9NPE3 64 aaKnown RBP1.09□□□□□ -2.23
CD46-213ENST00000471987 DMBT1Q9UGM3 2413 aaPredicted RBP1.08□□□□□ -2.24
CD46-213ENST00000471987 APOBP04114 4563 aaKnown RBP1.08□□□□□ -2.24
CD46-213ENST00000471987 KLK9Q2XQG4 91 aa1.07□□□□□ -2.24
CD46-213ENST00000471987 DNAH2Q9P225 4427 aa1.07□□□□□ -2.24
CD46-213ENST00000471987 DEFB108AA8MXU0 73 aa1.06□□□□□ -2.24
CD46-213ENST00000471987 DNAH17Q9UFH2 4485 aa1.06□□□□□ -2.24
CD46-213ENST00000471987 SRRM2Q9UQ35 2752 aaKnown RBP1.05□□□□□ -2.24
CD46-213ENST00000471987 A0A0D9SG42 100 aa1.04□□□□□ -2.24
CD46-213ENST00000471987 USH2AO75445 5202 aa1.03□□□□□ -2.24
CD46-213ENST00000471987 MUC12Q9UKN1 5478 aa1.03□□□□□ -2.24
CD46-213ENST00000471987 AKAP6Q13023 2319 aa1.03□□□□□ -2.24
CD46-213ENST00000471987 MACF1Q9UPN3 7388 aaKnown RBP1.03□□□□□ -2.24
CD46-213ENST00000471987 SPINK1P00995 79 aa1.03□□□□□ -2.24
CD46-213ENST00000471987 VPS13BQ7Z7G8 4022 aa1.02□□□□□ -2.25
CD46-213ENST00000471987 KMT2DO14686 5537 aa1.01□□□□□ -2.25
CD46-213ENST00000471987 TNXBP22105 4242 aa1□□□□□ -2.25
CD46-213ENST00000471987 MUC5BQ9HC84 5762 aaPredicted RBP0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms