RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 MUC12Q9UKN1 5478 aa9.89□□□□□ -0.83
C9orf3-213ENST00000471978 IMUPQ9GZP8 106 aa9.84□□□□□ -0.83
C9orf3-213ENST00000471978 ACYP1P07311 99 aa9.82□□□□□ -0.84
C9orf3-213ENST00000471978 PCP4L1A6NKN8 68 aa9.8□□□□□ -0.84
C9orf3-213ENST00000471978 UQCRQO14949 82 aa9.79□□□□□ -0.84
C9orf3-213ENST00000471978 NDUFC1O43677 76 aa9.79□□□□□ -0.84
C9orf3-213ENST00000471978 HIST1H4AP62805 103 aaKnown RBP9.78□□□□□ -0.84
C9orf3-213ENST00000471978 ATP5EP2Q5VTU8 51 aa9.78□□□□□ -0.84
C9orf3-213ENST00000471978 H0Y9P7 68 aa9.77□□□□□ -0.85
C9orf3-213ENST00000471978 ATOX1O00244 68 aa9.76□□□□□ -0.85
C9orf3-213ENST00000471978 H0YAA0 97 aa9.74□□□□□ -0.85
C9orf3-213ENST00000471978 FAM240AA0A1B0GVK7 77 aa9.73□□□□□ -0.85
C9orf3-213ENST00000471978 KRTAP5-9P26371 169 aa9.73□□□□□ -0.85
C9orf3-213ENST00000471978 KMT2DO14686 5537 aa9.67□□□□□ -0.86
C9orf3-213ENST00000471978 A8MUN3 132 aa9.66□□□□□ -0.86
C9orf3-213ENST00000471978 ADM2Q7Z4H4 148 aa9.66□□□□□ -0.86
C9orf3-213ENST00000471978 KRTAP20-1Q3LI63 56 aa9.64□□□□□ -0.87
C9orf3-213ENST00000471978 MDN1Q9NU22 5596 aa9.61□□□□□ -0.87
C9orf3-213ENST00000471978 LINC00208Q96KT6 92 aa9.6□□□□□ -0.87
C9orf3-213ENST00000471978 LINC00643Q86TS7 51 aa9.56□□□□□ -0.88
C9orf3-213ENST00000471978 PRO2289Q9P1D8 64 aa9.53□□□□□ -0.88
C9orf3-213ENST00000471978 MP68P56378 58 aa9.51□□□□□ -0.89
C9orf3-213ENST00000471978 OCR1Q9BZK8 76 aa9.49□□□□□ -0.89
C9orf3-213ENST00000471978 MT1XP80297 61 aa9.47□□□□□ -0.89
C9orf3-213ENST00000471978 PLAC4Q8WY50 150 aa9.47□□□□□ -0.89
C9orf3-213ENST00000471978 R4GN34 69 aa9.43□□□□□ -0.9
C9orf3-213ENST00000471978 SPRR2FQ96RM1 72 aa9.42□□□□□ -0.9
C9orf3-213ENST00000471978 P0C880 135 aa9.4□□□□□ -0.9
C9orf3-213ENST00000471978 C20orf197Q8N268 126 aa9.38□□□□□ -0.91
C9orf3-213ENST00000471978 M0QZ58 72 aa9.34□□□□□ -0.91
C9orf3-213ENST00000471978 H3BPC8 53 aa9.33□□□□□ -0.92
C9orf3-213ENST00000471978 KRTAP2-3P0C7H8 128 aa9.33□□□□□ -0.92
C9orf3-213ENST00000471978 SPRR2EP22531 72 aa9.33□□□□□ -0.92
C9orf3-213ENST00000471978 SPRR2BP35325 72 aa9.33□□□□□ -0.92
C9orf3-213ENST00000471978 SPRR2AP35326 72 aa9.33□□□□□ -0.92
C9orf3-213ENST00000471978 KRTAP2-4Q9BYR9 128 aa9.33□□□□□ -0.92
C9orf3-213ENST00000471978 DMAC1Q96GE9 116 aa9.32□□□□□ -0.92
C9orf3-213ENST00000471978 KRTAP8-1Q8IUC2 63 aa9.31□□□□□ -0.92
C9orf3-213ENST00000471978 KRTAP12-2P59991 146 aa9.28□□□□□ -0.92
C9orf3-213ENST00000471978 KRTAP3-2Q9BYR7 98 aa9.27□□□□□ -0.93
C9orf3-213ENST00000471978 A0A1B0GV90 55 aa9.23□□□□□ -0.93
C9orf3-213ENST00000471978 SCGB1A1P11684 91 aa9.23□□□□□ -0.93
C9orf3-213ENST00000471978 LINC01554Q52M75 96 aa9.23□□□□□ -0.93
C9orf3-213ENST00000471978 LCE1AQ5T7P2 110 aa9.17□□□□□ -0.94
C9orf3-213ENST00000471978 J3QR89 54 aa9.16□□□□□ -0.94
C9orf3-213ENST00000471978 KRTAP4-8A0A0G2JLE6 195 aa9.14□□□□□ -0.95
C9orf3-213ENST00000471978 KRTAP4-8Q9BYQ9 185 aa9.14□□□□□ -0.95
C9orf3-213ENST00000471978 TRAV7A0A075B6U4 112 aa9.12□□□□□ -0.95
C9orf3-213ENST00000471978 ACYP2P14621 99 aa9.06□□□□□ -0.96
C9orf3-213ENST00000471978 KRTAP10-7P60409 375 aaPredicted RBP9.05□□□□□ -0.96
C9orf3-213ENST00000471978 SPRR2DP22532 72 aa9.02□□□□□ -0.97
C9orf3-213ENST00000471978 KRTAP2-2Q9BYT5 123 aa9.02□□□□□ -0.97
C9orf3-213ENST00000471978 KRTAP2-1Q9BYU5 128 aa9.02□□□□□ -0.97
C9orf3-213ENST00000471978 MT-ATP8P03928 68 aa9□□□□□ -0.97
C9orf3-213ENST00000471978 SPTSSBQ8NFR3 76 aa9□□□□□ -0.97
C9orf3-213ENST00000471978 KRTAP10-12P60413 245 aa8.99□□□□□ -0.97
C9orf3-213ENST00000471978 CHKB-CPT1BH3BT56 60 aa8.9□□□□□ -0.98
C9orf3-213ENST00000471978 SMIM20Q8N5G0 67 aa8.9□□□□□ -0.98
C9orf3-213ENST00000471978 LCE3BQ5TA77 95 aa8.79□□□□□ -1
C9orf3-213ENST00000471978 SNURFQ9Y675 71 aa8.77□□□□□ -1.01
C9orf3-213ENST00000471978 K7ERU9 68 aa8.69□□□□□ -1.02
C9orf3-213ENST00000471978 KRTAP13-4Q3LI77 160 aa8.69□□□□□ -1.02
C9orf3-213ENST00000471978 SPANXA2-OT1Q8N9U9 137 aa8.66□□□□□ -1.02
C9orf3-213ENST00000471978 CAMK2N1Q7Z7J9 78 aa8.64□□□□□ -1.03
C9orf3-213ENST00000471978 SERP2Q8N6R1 65 aa8.52□□□□□ -1.05
C9orf3-213ENST00000471978 KRTAP19-7Q3SYF9 63 aa8.46□□□□□ -1.06
C9orf3-213ENST00000471978 COA5Q86WW8 74 aa8.45□□□□□ -1.06
C9orf3-213ENST00000471978 LCE5AQ5TCM9 118 aa8.43□□□□□ -1.06
C9orf3-213ENST00000471978 A0A0D9SG42 100 aa8.42□□□□□ -1.06
C9orf3-213ENST00000471978 DSTQ03001 7570 aaKnown RBP8.42□□□□□ -1.06
C9orf3-213ENST00000471978 MT1EP04732 61 aa8.41□□□□□ -1.06
C9orf3-213ENST00000471978 SEC61GP60059 68 aa8.41□□□□□ -1.06
C9orf3-213ENST00000471978 SERP1Q9Y6X1 66 aa8.4□□□□□ -1.06
C9orf3-213ENST00000471978 KRTAP19-3Q7Z4W3 81 aa8.38□□□□□ -1.07
C9orf3-213ENST00000471978 SPATA8Q6RVD6 105 aa8.35□□□□□ -1.07
C9orf3-213ENST00000471978 SPINT4Q6UDR6 99 aa8.32□□□□□ -1.08
C9orf3-213ENST00000471978 A0A1B0GU33 70 aa8.28□□□□□ -1.08
C9orf3-213ENST00000471978 KRTAP4-9Q9BYQ8 210 aa8.24□□□□□ -1.09
C9orf3-213ENST00000471978 GPR98Q8WXG9 6306 aa8.22□□□□□ -1.09
C9orf3-213ENST00000471978 KRTAP12-1P59990 96 aa8.22□□□□□ -1.09
C9orf3-213ENST00000471978 KRTAP19-5Q3LI72 72 aa8.22□□□□□ -1.09
C9orf3-213ENST00000471978 CYSTM1Q9H1C7 97 aa8.2□□□□□ -1.1
C9orf3-213ENST00000471978 COX7CP15954 63 aa8.18□□□□□ -1.1
C9orf3-213ENST00000471978 MT1GP13640 62 aa8.16□□□□□ -1.1
C9orf3-213ENST00000471978 H7BZZ5 65 aa8.12□□□□□ -1.11
C9orf3-213ENST00000471978 PP632Q6XCG6 107 aa8.1□□□□□ -1.11
C9orf3-213ENST00000471978 SMIM26A0A096LP01 95 aa8.05□□□□□ -1.12
C9orf3-213ENST00000471978 A0A1B0GU69 56 aa8.03□□□□□ -1.12
C9orf3-213ENST00000471978 LCE1DQ5T752 114 aa8.02□□□□□ -1.13
C9orf3-213ENST00000471978 MT1MQ8N339 61 aa8.02□□□□□ -1.13
C9orf3-213ENST00000471978 MT1LQ93083 61 aa8.01□□□□□ -1.13
C9orf3-213ENST00000471978 A8MU10 97 aa7.99□□□□□ -1.13
C9orf3-213ENST00000471978 LCE4AQ5TA78 99 aa7.95□□□□□ -1.14
C9orf3-213ENST00000471978 HMCN1Q96RW7 5635 aa7.93□□□□□ -1.14
C9orf3-213ENST00000471978 LCE3AQ5TA76 89 aa7.93□□□□□ -1.14
C9orf3-213ENST00000471978 C10orf95Q9H7T3 257 aa7.92□□□□□ -1.14
C9orf3-213ENST00000471978 MT4P47944 62 aa7.91□□□□□ -1.14
C9orf3-213ENST00000471978 TNP1P09430 55 aa7.9□□□□□ -1.14
C9orf3-213ENST00000471978 KRTAP4-3Q9BYR4 195 aa7.85□□□□□ -1.15
C9orf3-213ENST00000471978 KRTAP5-4Q6L8H1 288 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms