RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 HSPB8Q9UJY1 196 aa1.13□□□□□ -2.23
LRCH3-213ENST00000471667 MT-ND4LP03901 98 aa1.12□□□□□ -2.23
LRCH3-213ENST00000471667 CCKP06307 115 aa1.12□□□□□ -2.23
LRCH3-213ENST00000471667 FABP2P12104 132 aa1.12□□□□□ -2.23
LRCH3-213ENST00000471667 IFITM1P13164 125 aa1.12□□□□□ -2.23
LRCH3-213ENST00000471667 PMCHL1Q16048 86 aa1.12□□□□□ -2.23
LRCH3-213ENST00000471667 SEC11CQ9BY50 192 aa1.12□□□□□ -2.23
LRCH3-213ENST00000471667 A0A1W2PPM0 123 aa1.11□□□□□ -2.23
LRCH3-213ENST00000471667 P0C880 135 aa1.11□□□□□ -2.23
LRCH3-213ENST00000471667 COX19Q49B96 90 aa1.11□□□□□ -2.23
LRCH3-213ENST00000471667 C10orf95Q9H7T3 257 aa1.11□□□□□ -2.23
LRCH3-213ENST00000471667 PHGR1C9JFL3 82 aa1.1□□□□□ -2.23
LRCH3-213ENST00000471667 PEA15Q15121 130 aa1.1□□□□□ -2.23
LRCH3-213ENST00000471667 SCGB1D4Q6XE38 83 aa1.1□□□□□ -2.23
LRCH3-213ENST00000471667 SLC51BQ86UW2 128 aa1.1□□□□□ -2.23
LRCH3-213ENST00000471667 VPS25Q9BRG1 176 aa1.1□□□□□ -2.23
LRCH3-213ENST00000471667 A0A0D9SG42 100 aa1.09□□□□□ -2.23
LRCH3-213ENST00000471667 SMLR1H3BR10 107 aa1.09□□□□□ -2.23
LRCH3-213ENST00000471667 DPM2O94777 84 aa1.09□□□□□ -2.23
LRCH3-213ENST00000471667 IGKCP01834 107 aa1.09□□□□□ -2.23
LRCH3-213ENST00000471667 A0A087WVE0 104 aa1.07□□□□□ -2.24
LRCH3-213ENST00000471667 H3BQ85 93 aa1.07□□□□□ -2.24
LRCH3-213ENST00000471667 S100PP25815 95 aa1.07□□□□□ -2.24
LRCH3-213ENST00000471667 KRTAP12-3P60328 96 aa1.07□□□□□ -2.24
LRCH3-213ENST00000471667 IFITM3Q01628 133 aa1.07□□□□□ -2.24
LRCH3-213ENST00000471667 A0A1B0GV72 72 aa1.06□□□□□ -2.24
LRCH3-213ENST00000471667 Q6ZQT0 140 aa1.06□□□□□ -2.24
LRCH3-213ENST00000471667 HSBP1O75506 76 aa1.05□□□□□ -2.24
LRCH3-213ENST00000471667 KRTAP6-2Q3LI66 62 aa1.05□□□□□ -2.24
LRCH3-213ENST00000471667 C18orf32Q8TCD1 76 aa1.05□□□□□ -2.24
LRCH3-213ENST00000471667 CHCHD1Q96BP2 118 aaKnown RBP1.05□□□□□ -2.24
LRCH3-213ENST00000471667 MMP24-AS1A0A0U1RRL7 71 aa1.04□□□□□ -2.24
LRCH3-213ENST00000471667 H0YGX0 51 aa1.04□□□□□ -2.24
LRCH3-213ENST00000471667 LEPROTL1O95214 131 aa1.04□□□□□ -2.24
LRCH3-213ENST00000471667 DNAL4O96015 105 aa1.04□□□□□ -2.24
LRCH3-213ENST00000471667 PCP4L1A6NKN8 68 aa1.03□□□□□ -2.24
LRCH3-213ENST00000471667 A0A1B0GX51 115 aa1.02□□□□□ -2.25
LRCH3-213ENST00000471667 SEC61GP60059 68 aa1.02□□□□□ -2.25
LRCH3-213ENST00000471667 PMCHL2Q9BQD1 86 aa1.02□□□□□ -2.25
LRCH3-213ENST00000471667 TMEM256-PLSCR3K7ERE1 68 aa1.01□□□□□ -2.25
LRCH3-213ENST00000471667 ACYP1P07311 99 aa1.01□□□□□ -2.25
LRCH3-213ENST00000471667 ORMDL1Q9P0S3 153 aa1.01□□□□□ -2.25
LRCH3-213ENST00000471667 BPY2O14599 106 aa1□□□□□ -2.25
LRCH3-213ENST00000471667 MT1AP04731 61 aa1□□□□□ -2.25
LRCH3-213ENST00000471667 CASC2Q6XLA1 102 aa0.99□□□□□ -2.25
LRCH3-213ENST00000471667 A0A1B0GW54 56 aa0.98□□□□□ -2.25
LRCH3-213ENST00000471667 C9JAW5 83 aa0.98□□□□□ -2.25
LRCH3-213ENST00000471667 NREPQ16612 68 aa0.98□□□□□ -2.25
LRCH3-213ENST00000471667 KRTAP6-1Q3LI64 71 aa0.98□□□□□ -2.25
LRCH3-213ENST00000471667 FABP4P15090 132 aa0.97□□□□□ -2.25
LRCH3-213ENST00000471667 RGS21Q2M5E4 152 aa0.96□□□□□ -2.26
LRCH3-213ENST00000471667 TTTY13Q9BZ97 58 aa0.96□□□□□ -2.26
LRCH3-213ENST00000471667 SPINT4Q6UDR6 99 aa0.95□□□□□ -2.26
LRCH3-213ENST00000471667 SPANXA2-OT1Q8N9U9 137 aa0.95□□□□□ -2.26
LRCH3-213ENST00000471667 YPEL4Q96NS1 127 aa0.95□□□□□ -2.26
LRCH3-213ENST00000471667 LOC110117498A0A087WWA1 95 aa0.94□□□□□ -2.26
LRCH3-213ENST00000471667 KRTDAPP60985 99 aa0.94□□□□□ -2.26
LRCH3-213ENST00000471667 LINC01545Q5VT33 79 aa0.94□□□□□ -2.26
LRCH3-213ENST00000471667 TP53AIP1Q9HCN2 124 aa0.93□□□□□ -2.26
LRCH3-213ENST00000471667 TRAV22A0A0B4J277 110 aa0.92□□□□□ -2.26
LRCH3-213ENST00000471667 K7EP34 96 aa0.92□□□□□ -2.26
LRCH3-213ENST00000471667 HIGD1BQ9P298 99 aa0.92□□□□□ -2.26
LRCH3-213ENST00000471667 SYS1-DBNDD2H3BUS1 97 aa0.91□□□□□ -2.26
LRCH3-213ENST00000471667 CYP4F30PQ9H0H9 118 aa0.91□□□□□ -2.26
LRCH3-213ENST00000471667 LOC101927531A0A1B0GV80 90 aa0.9□□□□□ -2.27
LRCH3-213ENST00000471667 JMJD7-PLA2G4BH0Y9G9 81 aa0.89□□□□□ -2.27
LRCH3-213ENST00000471667 COX6CP09669 75 aa0.89□□□□□ -2.27
LRCH3-213ENST00000471667 TNP1P09430 55 aa0.88□□□□□ -2.27
LRCH3-213ENST00000471667 KRTAP25-1Q3LHN0 102 aa0.88□□□□□ -2.27
LRCH3-213ENST00000471667 SMIM26A0A096LP01 95 aa0.87□□□□□ -2.27
LRCH3-213ENST00000471667 PSMB2P49721 201 aa0.87□□□□□ -2.27
LRCH3-213ENST00000471667 A0A0B4J2C4 111 aa0.86□□□□□ -2.27
LRCH3-213ENST00000471667 BAALC-AS2P0C853 105 aa0.86□□□□□ -2.27
LRCH3-213ENST00000471667 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
LRCH3-213ENST00000471667 HSBP1L1C9JCN9 74 aa0.84□□□□□ -2.27
LRCH3-213ENST00000471667 TSTD3H0UI37 97 aa0.84□□□□□ -2.27
LRCH3-213ENST00000471667 LUZP6Q538Z0 58 aa0.84□□□□□ -2.27
LRCH3-213ENST00000471667 SPTSSBQ8NFR3 76 aa0.84□□□□□ -2.27
LRCH3-213ENST00000471667 PRO1854Q9UHT4 67 aa0.84□□□□□ -2.27
LRCH3-213ENST00000471667 TMEM218A2RU14 115 aa0.81□□□□□ -2.28
LRCH3-213ENST00000471667 ATOX1O00244 68 aa0.81□□□□□ -2.28
LRCH3-213ENST00000471667 KRTAP13-4Q3LI77 160 aa0.81□□□□□ -2.28
LRCH3-213ENST00000471667 HIST3H2BBQ8N257 126 aa0.81□□□□□ -2.28
LRCH3-213ENST00000471667 HIST1H2BLQ99880 126 aa0.81□□□□□ -2.28
LRCH3-213ENST00000471667 SCGB1C2P0DMR2 95 aa0.8□□□□□ -2.28
LRCH3-213ENST00000471667 SCGB1A1P11684 91 aa0.8□□□□□ -2.28
LRCH3-213ENST00000471667 ATOH7Q8N100 152 aa0.8□□□□□ -2.28
LRCH3-213ENST00000471667 C14orf132Q9NPU4 83 aa0.8□□□□□ -2.28
LRCH3-213ENST00000471667 TRAV7A0A075B6U4 112 aa0.78□□□□□ -2.28
LRCH3-213ENST00000471667 PSPHP1O15172 72 aa0.78□□□□□ -2.28
LRCH3-213ENST00000471667 NDUFA5Q16718 116 aa0.77□□□□□ -2.29
LRCH3-213ENST00000471667 LINC00208Q96KT6 92 aa0.77□□□□□ -2.29
LRCH3-213ENST00000471667 VAMP8Q9BV40 100 aa0.77□□□□□ -2.29
LRCH3-213ENST00000471667 ACYP2P14621 99 aa0.76□□□□□ -2.29
LRCH3-213ENST00000471667 ATXN8Q156A1 80 aa0.76□□□□□ -2.29
LRCH3-213ENST00000471667 H0Y9P7 68 aa0.75□□□□□ -2.29
LRCH3-213ENST00000471667 KRTAP12-1P59990 96 aa0.74□□□□□ -2.29
LRCH3-213ENST00000471667 SVBPQ8N300 66 aa0.74□□□□□ -2.29
LRCH3-213ENST00000471667 UBL5Q9BZL1 73 aa0.74□□□□□ -2.29
LRCH3-213ENST00000471667 SPCS1Q9Y6A9 102 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms