RNA–Protein interactions for RNA: ENST00000470180.2

C1orf43-207, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 5

Gene C1orf43, Length 1,861 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-207ENST00000470180 SPTSSBQ8NFR3 76 aa8.51□□□□□ -1.05
C1orf43-207ENST00000470180 KRTAP3-3Q9BYR6 98 aa8.51□□□□□ -1.05
C1orf43-207ENST00000470180 HMCN2Q8NDA2 5059 aa8.51□□□□□ -1.05
C1orf43-207ENST00000470180 H1FX-AS1Q4G0G2 97 aa8.49□□□□□ -1.05
C1orf43-207ENST00000470180 RBM12B-AS1Q9P1G2 102 aa8.49□□□□□ -1.05
C1orf43-207ENST00000470180 LCA10Q71F78 164 aa8.49□□□□□ -1.05
C1orf43-207ENST00000470180 A0A1B0GU69 56 aa8.47□□□□□ -1.05
C1orf43-207ENST00000470180 S4R3F8 94 aa8.45□□□□□ -1.06
C1orf43-207ENST00000470180 BRK1Q8WUW1 75 aa8.38□□□□□ -1.07
C1orf43-207ENST00000470180 KRTAP19-2Q3LHN2 52 aa8.37□□□□□ -1.07
C1orf43-207ENST00000470180 A6NED7 52 aa8.35□□□□□ -1.07
C1orf43-207ENST00000470180 SEC61GP60059 68 aa8.33□□□□□ -1.08
C1orf43-207ENST00000470180 A8MU10 97 aa8.32□□□□□ -1.08
C1orf43-207ENST00000470180 PRO0628Q9UI54 55 aa8.26□□□□□ -1.09
C1orf43-207ENST00000470180 MUC2Q02817 5179 aa8.25□□□□□ -1.09
C1orf43-207ENST00000470180 CSAG1Q6PB30 78 aa8.24□□□□□ -1.09
C1orf43-207ENST00000470180 KRTAP3-2Q9BYR7 98 aa8.24□□□□□ -1.09
C1orf43-207ENST00000470180 CDC42SE1Q9NRR8 79 aa8.23□□□□□ -1.09
C1orf43-207ENST00000470180 UQCR11O14957 56 aa8.23□□□□□ -1.09
C1orf43-207ENST00000470180 KRTAP10-6P60371 365 aaPredicted RBP8.23□□□□□ -1.09
C1orf43-207ENST00000470180 SPATA8Q6RVD6 105 aa8.19□□□□□ -1.1
C1orf43-207ENST00000470180 A0A1B0GU33 70 aa8.19□□□□□ -1.1
C1orf43-207ENST00000470180 MIR22HGQ0VDD5 57 aa8.16□□□□□ -1.1
C1orf43-207ENST00000470180 P0C880 135 aa8.14□□□□□ -1.11
C1orf43-207ENST00000470180 ADM2Q7Z4H4 148 aa8.12□□□□□ -1.11
C1orf43-207ENST00000470180 H0YAA0 97 aa8.11□□□□□ -1.11
C1orf43-207ENST00000470180 LCE2CQ5TA81 110 aa8.11□□□□□ -1.11
C1orf43-207ENST00000470180 FLGP20930 4061 aaPredicted RBP8.08□□□□□ -1.12
C1orf43-207ENST00000470180 UBR4Q5T4S7 5183 aa8.06□□□□□ -1.12
C1orf43-207ENST00000470180 RNF213Q63HN8 5207 aa8.05□□□□□ -1.12
C1orf43-207ENST00000470180 KRTAP13-4Q3LI77 160 aa8.03□□□□□ -1.12
C1orf43-207ENST00000470180 LCE2DQ5TA82 110 aaPredicted RBP7.99□□□□□ -1.13
C1orf43-207ENST00000470180 PMAIP1Q13794 54 aa7.93□□□□□ -1.14
C1orf43-207ENST00000470180 FAT4Q6V0I7 4981 aa7.92□□□□□ -1.14
C1orf43-207ENST00000470180 A6NN06 94 aa7.89□□□□□ -1.15
C1orf43-207ENST00000470180 LORP23490 312 aaPredicted RBP7.89□□□□□ -1.15
C1orf43-207ENST00000470180 MT1HP80294 61 aa7.89□□□□□ -1.15
C1orf43-207ENST00000470180 SVIPQ8NHG7 77 aa7.89□□□□□ -1.15
C1orf43-207ENST00000470180 M0QZ58 72 aa7.87□□□□□ -1.15
C1orf43-207ENST00000470180 A0A0D9SG42 100 aa7.85□□□□□ -1.15
C1orf43-207ENST00000470180 R4GN34 69 aa7.79□□□□□ -1.16
C1orf43-207ENST00000470180 M0R2T5 61 aa7.77□□□□□ -1.17
C1orf43-207ENST00000470180 KRTAP12-1P59990 96 aa7.71□□□□□ -1.18
C1orf43-207ENST00000470180 KRTAP12-2P59991 146 aa7.7□□□□□ -1.18
C1orf43-207ENST00000470180 K7ERS5 55 aa7.69□□□□□ -1.18
C1orf43-207ENST00000470180 LINC01554Q52M75 96 aa7.68□□□□□ -1.18
C1orf43-207ENST00000470180 KRTAP9-8Q9BYQ0 159 aa7.65□□□□□ -1.18
C1orf43-207ENST00000470180 CRIPTQ9P021 101 aa7.64□□□□□ -1.19
C1orf43-207ENST00000470180 SPINT4Q6UDR6 99 aa7.64□□□□□ -1.19
C1orf43-207ENST00000470180 KTN1-AS1Q86SY8 53 aa7.62□□□□□ -1.19
C1orf43-207ENST00000470180 MT2AP02795 61 aa7.62□□□□□ -1.19
C1orf43-207ENST00000470180 MT1FP04733 61 aa7.58□□□□□ -1.2
C1orf43-207ENST00000470180 KRTAP10-10P60014 251 aa7.53□□□□□ -1.2
C1orf43-207ENST00000470180 KRTAP19-1Q8IUB9 90 aa7.52□□□□□ -1.21
C1orf43-207ENST00000470180 SPRR2GQ9BYE4 73 aa7.52□□□□□ -1.21
C1orf43-207ENST00000470180 LCE2AQ5TA79 106 aaPredicted RBP7.49□□□□□ -1.21
C1orf43-207ENST00000470180 ROMO1P60602 79 aa7.47□□□□□ -1.21
C1orf43-207ENST00000470180 PRAC1Q96KF2 57 aa7.46□□□□□ -1.22
C1orf43-207ENST00000470180 KRTAP9-3Q9BYQ3 159 aa7.36□□□□□ -1.23
C1orf43-207ENST00000470180 KRTAP19-8Q3LI54 63 aa7.31□□□□□ -1.24
C1orf43-207ENST00000470180 CAMK2N1Q7Z7J9 78 aa7.3□□□□□ -1.24
C1orf43-207ENST00000470180 C10orf95Q9H7T3 257 aa7.3□□□□□ -1.24
C1orf43-207ENST00000470180 PLAC4Q8WY50 150 aa7.25□□□□□ -1.25
C1orf43-207ENST00000470180 MT1BP07438 61 aa7.23□□□□□ -1.25
C1orf43-207ENST00000470180 KRTAP25-1Q3LHN0 102 aa7.21□□□□□ -1.25
C1orf43-207ENST00000470180 LCE2BO14633 110 aa7.14□□□□□ -1.27
C1orf43-207ENST00000470180 MT1XP80297 61 aa7.02□□□□□ -1.29
C1orf43-207ENST00000470180 KRTAP10-5P60370 271 aa7.01□□□□□ -1.29
C1orf43-207ENST00000470180 TNP1P09430 55 aa6.98□□□□□ -1.29
C1orf43-207ENST00000470180 USH2AO75445 5202 aa6.87□□□□□ -1.31
C1orf43-207ENST00000470180 PP632Q6XCG6 107 aa6.83□□□□□ -1.32
C1orf43-207ENST00000470180 PRO2289Q9P1D8 64 aa6.82□□□□□ -1.32
C1orf43-207ENST00000470180 KRTAP23-1A1A580 65 aa6.81□□□□□ -1.32
C1orf43-207ENST00000470180 KRTAP10-7P60409 375 aaPredicted RBP6.75□□□□□ -1.33
C1orf43-207ENST00000470180 LCE3AQ5TA76 89 aa6.72□□□□□ -1.33
C1orf43-207ENST00000470180 SSPOA2VEC9 5147 aa6.67□□□□□ -1.34
C1orf43-207ENST00000470180 KRTAP10-12P60413 245 aa6.65□□□□□ -1.34
C1orf43-207ENST00000470180 FSIP2Q5CZC0 6907 aa6.63□□□□□ -1.35
C1orf43-207ENST00000470180 KRTAP19-6Q3LI70 58 aa6.62□□□□□ -1.35
C1orf43-207ENST00000470180 KRTAP9-2Q9BYQ4 174 aa6.61□□□□□ -1.35
C1orf43-207ENST00000470180 KRTAP8-1Q8IUC2 63 aa6.57□□□□□ -1.36
C1orf43-207ENST00000470180 KRTAP4-8A0A0G2JLE6 195 aa6.48□□□□□ -1.37
C1orf43-207ENST00000470180 KRTAP4-8Q9BYQ9 185 aa6.48□□□□□ -1.37
C1orf43-207ENST00000470180 KRTAP15-1Q3LI76 137 aa6.45□□□□□ -1.38
C1orf43-207ENST00000470180 KRTAP12-3P60328 96 aa6.42□□□□□ -1.38
C1orf43-207ENST00000470180 KMT2DO14686 5537 aa6.39□□□□□ -1.39
C1orf43-207ENST00000470180 KRTAP19-5Q3LI72 72 aa6.36□□□□□ -1.39
C1orf43-207ENST00000470180 FCGBPQ9Y6R7 5405 aaPredicted RBP6.33□□□□□ -1.4
C1orf43-207ENST00000470180 CRCT1Q9UGL9 99 aa6.3□□□□□ -1.4
C1orf43-207ENST00000470180 KRTAP19-7Q3SYF9 63 aa6.26□□□□□ -1.41
C1orf43-207ENST00000470180 SPRR5A0A1B0GTR4 108 aa6.18□□□□□ -1.42
C1orf43-207ENST00000470180 KRTAP9-6A0A140TA67 174 aa6.16□□□□□ -1.42
C1orf43-207ENST00000470180 MT1EP04732 61 aa6.12□□□□□ -1.43
C1orf43-207ENST00000470180 LCE3CQ5T5A8 94 aa6.02□□□□□ -1.44
C1orf43-207ENST00000470180 MT1LQ93083 61 aa6.02□□□□□ -1.44
C1orf43-207ENST00000470180 MACF1Q9UPN3 7388 aaKnown RBP5.99□□□□□ -1.45
C1orf43-207ENST00000470180 NDUFAF8A1L188 74 aa5.98□□□□□ -1.45
C1orf43-207ENST00000470180 LUZP6Q538Z0 58 aa5.95□□□□□ -1.46
C1orf43-207ENST00000470180 KRTAP19-4Q3LI73 84 aa5.92□□□□□ -1.46
C1orf43-207ENST00000470180 KRTAP4-7Q9BYR0 210 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms