RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 HERC2O95714 4834 aa0.66□□□□□ -2.3
TTC3-213ENST00000469939 NBEAL1Q6ZS30 2694 aa0.66□□□□□ -2.3
TTC3-213ENST00000469939 EP300Q09472 2414 aaPredicted RBP0.66□□□□□ -2.3
TTC3-213ENST00000469939 PRRC2CQ9Y520 2896 aaKnown RBP0.66□□□□□ -2.3
TTC3-213ENST00000469939 CHD7Q9P2D1 2997 aa0.66□□□□□ -2.3
TTC3-213ENST00000469939 C5orf42Q9H799 3197 aa0.65□□□□□ -2.3
TTC3-213ENST00000469939 TENM4Q6N022 2769 aa0.65□□□□□ -2.3
TTC3-213ENST00000469939 TEX15Q9BXT5 2789 aa0.65□□□□□ -2.3
TTC3-213ENST00000469939 DEFB135Q30KP9 77 aa0.65□□□□□ -2.31
TTC3-213ENST00000469939 MGAQ8IWI9 3026 aa0.65□□□□□ -2.31
TTC3-213ENST00000469939 APC2O95996 2303 aa0.65□□□□□ -2.31
TTC3-213ENST00000469939 CENPFP49454 3210 aa0.64□□□□□ -2.31
TTC3-213ENST00000469939 LAMA3Q16787 3333 aa0.64□□□□□ -2.31
TTC3-213ENST00000469939 DSPP15924 2871 aaKnown RBP0.64□□□□□ -2.31
TTC3-213ENST00000469939 HTTP42858 3142 aa0.63□□□□□ -2.31
TTC3-213ENST00000469939 NBPF19A0A087WUL8 3843 aa0.63□□□□□ -2.31
TTC3-213ENST00000469939 A0A096LPF7 62 aa0.63□□□□□ -2.31
TTC3-213ENST00000469939 M0R2T5 61 aa0.63□□□□□ -2.31
TTC3-213ENST00000469939 SPART-AS1P0CW21 52 aa0.63□□□□□ -2.31
TTC3-213ENST00000469939 SMG1Q96Q15 3661 aaKnown RBP0.63□□□□□ -2.31
TTC3-213ENST00000469939 FSIP2Q5CZC0 6907 aa0.62□□□□□ -2.31
TTC3-213ENST00000469939 FLNCQ14315 2725 aa0.62□□□□□ -2.31
TTC3-213ENST00000469939 AKAP9Q99996 3911 aa0.62□□□□□ -2.31
TTC3-213ENST00000469939 A0A096LNI7 61 aa0.62□□□□□ -2.31
TTC3-213ENST00000469939 CD52P31358 61 aa0.62□□□□□ -2.31
TTC3-213ENST00000469939 PKD1L1Q8TDX9 2849 aa0.62□□□□□ -2.31
TTC3-213ENST00000469939 OTOGQ6ZRI0 2925 aa0.61□□□□□ -2.31
TTC3-213ENST00000469939 DNAH14Q0VDD8 3507 aa0.61□□□□□ -2.31
TTC3-213ENST00000469939 KRTAP21-1Q3LI58 79 aa0.61□□□□□ -2.31
TTC3-213ENST00000469939 PRUNE2Q8WUY3 3088 aa0.61□□□□□ -2.31
TTC3-213ENST00000469939 XIRP2A4UGR9 3374 aa0.61□□□□□ -2.31
TTC3-213ENST00000469939 WDR87Q6ZQQ6 2873 aa0.61□□□□□ -2.31
TTC3-213ENST00000469939 CELSR1Q9NYQ6 3014 aa0.61□□□□□ -2.31
TTC3-213ENST00000469939 NBASA2RRP1 2371 aa0.61□□□□□ -2.31
TTC3-213ENST00000469939 PDZD2O15018 2839 aa0.6□□□□□ -2.31
TTC3-213ENST00000469939 HIVEP3Q5T1R4 2406 aa0.6□□□□□ -2.31
TTC3-213ENST00000469939 LOC400499M0QZD8 3231 aa0.6□□□□□ -2.31
TTC3-213ENST00000469939 MTORP42345 2549 aa0.6□□□□□ -2.31
TTC3-213ENST00000469939 DEFB133Q30KQ1 61 aa0.6□□□□□ -2.31
TTC3-213ENST00000469939 FAT4Q6V0I7 4981 aa0.6□□□□□ -2.31
TTC3-213ENST00000469939 NF1P21359 2839 aa0.59□□□□□ -2.31
TTC3-213ENST00000469939 FAM186AA6NE01 2351 aa0.59□□□□□ -2.31
TTC3-213ENST00000469939 KRTAP20-1Q3LI63 56 aa0.59□□□□□ -2.31
TTC3-213ENST00000469939 KRTAP8-1Q8IUC2 63 aa0.59□□□□□ -2.31
TTC3-213ENST00000469939 CDH23Q9H251 3354 aa0.59□□□□□ -2.32
TTC3-213ENST00000469939 UTP20O75691 2785 aaKnown RBP0.59□□□□□ -2.32
TTC3-213ENST00000469939 TLN2Q9Y4G6 2542 aa0.59□□□□□ -2.32
TTC3-213ENST00000469939 DMBT1Q9UGM3 2413 aaPredicted RBP0.58□□□□□ -2.32
TTC3-213ENST00000469939 RIF1Q5UIP0 2472 aaKnown RBP0.58□□□□□ -2.32
TTC3-213ENST00000469939 U3KQA8 63 aa0.58□□□□□ -2.32
TTC3-213ENST00000469939 SPENQ96T58 3664 aaKnown RBP0.58□□□□□ -2.32
TTC3-213ENST00000469939 MGAM2Q2M2H8 2515 aa0.58□□□□□ -2.32
TTC3-213ENST00000469939 SSPOA2VEC9 5147 aa0.57□□□□□ -2.32
TTC3-213ENST00000469939 VPS13DQ5THJ4 4388 aa0.57□□□□□ -2.32
TTC3-213ENST00000469939 USP9YO00507 2555 aaPredicted RBP0.57□□□□□ -2.32
TTC3-213ENST00000469939 VPS13AQ96RL7 3174 aa0.57□□□□□ -2.32
TTC3-213ENST00000469939 CEP295Q9C0D2 2601 aa0.56□□□□□ -2.32
TTC3-213ENST00000469939 WDFY3Q8IZQ1 3526 aa0.56□□□□□ -2.32
TTC3-213ENST00000469939 MYO15AQ9UKN7 3530 aa0.56□□□□□ -2.32
TTC3-213ENST00000469939 FRYLO94915 3013 aa0.56□□□□□ -2.32
TTC3-213ENST00000469939 FRYQ5TBA9 3013 aa0.56□□□□□ -2.32
TTC3-213ENST00000469939 NBEAQ8NFP9 2946 aa0.55□□□□□ -2.32
TTC3-213ENST00000469939 MUC5ACP98088 5654 aa0.55□□□□□ -2.32
TTC3-213ENST00000469939 KMT2AQ03164 3969 aa0.55□□□□□ -2.32
TTC3-213ENST00000469939 SRRM2Q9UQ35 2752 aaKnown RBP0.55□□□□□ -2.32
TTC3-213ENST00000469939 VPS13BQ7Z7G8 4022 aa0.55□□□□□ -2.32
TTC3-213ENST00000469939 DSTQ03001 7570 aaKnown RBP0.55□□□□□ -2.32
TTC3-213ENST00000469939 ZZEF1O43149 2961 aa0.54□□□□□ -2.32
TTC3-213ENST00000469939 SYNE1Q8NF91 8797 aaKnown RBP0.54□□□□□ -2.32
TTC3-213ENST00000469939 DNAH7Q8WXX0 4024 aa0.54□□□□□ -2.32
TTC3-213ENST00000469939 TGP01266 2768 aa0.54□□□□□ -2.32
TTC3-213ENST00000469939 FREM2Q5SZK8 3169 aa0.53□□□□□ -2.32
TTC3-213ENST00000469939 LRP1Q07954 4544 aaKnown RBP0.53□□□□□ -2.32
TTC3-213ENST00000469939 CRYBG3Q68DQ2 2970 aa0.53□□□□□ -2.32
TTC3-213ENST00000469939 NSD1Q96L73 2696 aaPredicted RBP0.53□□□□□ -2.32
TTC3-213ENST00000469939 MXRA5Q9NR99 2828 aa0.53□□□□□ -2.32
TTC3-213ENST00000469939 DNAH11Q96DT5 4516 aa0.53□□□□□ -2.33
TTC3-213ENST00000469939 LYSTQ99698 3801 aa0.53□□□□□ -2.33
TTC3-213ENST00000469939 SONP18583 2426 aaKnown RBP0.53□□□□□ -2.33
TTC3-213ENST00000469939 STAB2Q8WWQ8 2551 aa0.52□□□□□ -2.33
TTC3-213ENST00000469939 CSMD2Q7Z408 3487 aa0.52□□□□□ -2.33
TTC3-213ENST00000469939 DMXL1Q9Y485 3027 aa0.52□□□□□ -2.33
TTC3-213ENST00000469939 PRKDCP78527 4128 aaKnown RBP0.52□□□□□ -2.33
TTC3-213ENST00000469939 DNAH3Q8TD57 4116 aa0.52□□□□□ -2.33
TTC3-213ENST00000469939 HMCN2Q8NDA2 5059 aa0.52□□□□□ -2.33
TTC3-213ENST00000469939 SVEP1Q4LDE5 3571 aa0.52□□□□□ -2.33
TTC3-213ENST00000469939 CUBNO60494 3623 aa0.52□□□□□ -2.33
TTC3-213ENST00000469939 KMT2DO14686 5537 aa0.51□□□□□ -2.33
TTC3-213ENST00000469939 ITPR1Q14643 2758 aa0.51□□□□□ -2.33
TTC3-213ENST00000469939 TRIOO75962 3097 aa0.51□□□□□ -2.33
TTC3-213ENST00000469939 COL12A1Q99715 3063 aa0.51□□□□□ -2.33
TTC3-213ENST00000469939 HTN3P15516 51 aa0.51□□□□□ -2.33
TTC3-213ENST00000469939 FAT3Q8TDW7 4589 aa0.51□□□□□ -2.33
TTC3-213ENST00000469939 TNXBP22105 4242 aa0.51□□□□□ -2.33
TTC3-213ENST00000469939 DMDP11532 3685 aa0.51□□□□□ -2.33
TTC3-213ENST00000469939 COL7A1Q02388 2944 aa0.51□□□□□ -2.33
TTC3-213ENST00000469939 ACANP16112 2415 aa0.5□□□□□ -2.33
TTC3-213ENST00000469939 AKAP13Q12802 2813 aa0.5□□□□□ -2.33
TTC3-213ENST00000469939 PRM1P04553 51 aa0.5□□□□□ -2.33
TTC3-213ENST00000469939 RNF213Q63HN8 5207 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms