RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 UBR4Q5T4S7 5183 aa6.05□□□□□ -1.44
VPS16-206ENST00000466415 RNF213Q63HN8 5207 aa6.02□□□□□ -1.45
VPS16-206ENST00000466415 KRTAP19-2Q3LHN2 52 aa6□□□□□ -1.45
VPS16-206ENST00000466415 SPTSSBQ8NFR3 76 aa6□□□□□ -1.45
VPS16-206ENST00000466415 LCA10Q71F78 164 aa5.99□□□□□ -1.45
VPS16-206ENST00000466415 MUC2Q02817 5179 aa5.96□□□□□ -1.45
VPS16-206ENST00000466415 RPS28P62857 69 aaKnown RBP5.93□□□□□ -1.46
VPS16-206ENST00000466415 LCE2CQ5TA81 110 aa5.93□□□□□ -1.46
VPS16-206ENST00000466415 CSAG1Q6PB30 78 aa5.92□□□□□ -1.46
VPS16-206ENST00000466415 M0R2T5 61 aa5.89□□□□□ -1.47
VPS16-206ENST00000466415 SMIM26A0A096LP01 95 aa5.87□□□□□ -1.47
VPS16-206ENST00000466415 MT1HP80294 61 aa5.87□□□□□ -1.47
VPS16-206ENST00000466415 LCE2BO14633 110 aa5.86□□□□□ -1.47
VPS16-206ENST00000466415 FLGP20930 4061 aaPredicted RBP5.83□□□□□ -1.48
VPS16-206ENST00000466415 FAT4Q6V0I7 4981 aa5.83□□□□□ -1.48
VPS16-206ENST00000466415 V9GYY9 64 aa5.82□□□□□ -1.48
VPS16-206ENST00000466415 SEC61GP60059 68 aa5.81□□□□□ -1.48
VPS16-206ENST00000466415 PRR15LQ9BU68 103 aa5.78□□□□□ -1.48
VPS16-206ENST00000466415 LINC01558Q9Y6Z2 57 aa5.78□□□□□ -1.48
VPS16-206ENST00000466415 A0A1B0GU69 56 aa5.77□□□□□ -1.49
VPS16-206ENST00000466415 Q1T7F1 81 aa5.76□□□□□ -1.49
VPS16-206ENST00000466415 H0YAA0 97 aa5.74□□□□□ -1.49
VPS16-206ENST00000466415 ADM2Q7Z4H4 148 aa5.74□□□□□ -1.49
VPS16-206ENST00000466415 PRO0628Q9UI54 55 aa5.71□□□□□ -1.5
VPS16-206ENST00000466415 LOC100996750A0A140TA64 210 aa5.69□□□□□ -1.5
VPS16-206ENST00000466415 PSPHP1O15172 72 aa5.69□□□□□ -1.5
VPS16-206ENST00000466415 LCE2AQ5TA79 106 aaPredicted RBP5.69□□□□□ -1.5
VPS16-206ENST00000466415 KRTAP4-6Q9BYQ5 205 aa5.69□□□□□ -1.5
VPS16-206ENST00000466415 KRTAP10-6P60371 365 aaPredicted RBP5.68□□□□□ -1.5
VPS16-206ENST00000466415 P0C880 135 aa5.66□□□□□ -1.5
VPS16-206ENST00000466415 LORP23490 312 aaPredicted RBP5.63□□□□□ -1.51
VPS16-206ENST00000466415 Q5VV11 94 aa5.62□□□□□ -1.51
VPS16-206ENST00000466415 A0A1B0GU33 70 aa5.61□□□□□ -1.51
VPS16-206ENST00000466415 MT2AP02795 61 aa5.61□□□□□ -1.51
VPS16-206ENST00000466415 KRTAP10-10P60014 251 aa5.6□□□□□ -1.51
VPS16-206ENST00000466415 KRTAP9-8Q9BYQ0 159 aa5.6□□□□□ -1.51
VPS16-206ENST00000466415 UQCR11O14957 56 aa5.57□□□□□ -1.52
VPS16-206ENST00000466415 MT1FP04733 61 aa5.57□□□□□ -1.52
VPS16-206ENST00000466415 CRIPTQ9P021 101 aa5.57□□□□□ -1.52
VPS16-206ENST00000466415 R4GN34 69 aa5.57□□□□□ -1.52
VPS16-206ENST00000466415 M0QZ58 72 aa5.56□□□□□ -1.52
VPS16-206ENST00000466415 A6NED7 52 aa5.55□□□□□ -1.52
VPS16-206ENST00000466415 MIR22HGQ0VDD5 57 aa5.5□□□□□ -1.53
VPS16-206ENST00000466415 SPATA8Q6RVD6 105 aa5.5□□□□□ -1.53
VPS16-206ENST00000466415 KRTAP13-4Q3LI77 160 aa5.48□□□□□ -1.53
VPS16-206ENST00000466415 LINC01554Q52M75 96 aa5.47□□□□□ -1.53
VPS16-206ENST00000466415 A0A0D9SG42 100 aa5.44□□□□□ -1.54
VPS16-206ENST00000466415 SPRR2GQ9BYE4 73 aa5.43□□□□□ -1.54
VPS16-206ENST00000466415 A8MU10 97 aa5.41□□□□□ -1.54
VPS16-206ENST00000466415 PMAIP1Q13794 54 aa5.41□□□□□ -1.54
VPS16-206ENST00000466415 KRTAP9-3Q9BYQ3 159 aa5.41□□□□□ -1.54
VPS16-206ENST00000466415 CDC42SE1Q9NRR8 79 aa5.41□□□□□ -1.54
VPS16-206ENST00000466415 KRTAP19-1Q8IUB9 90 aa5.4□□□□□ -1.54
VPS16-206ENST00000466415 BRK1Q8WUW1 75 aa5.39□□□□□ -1.55
VPS16-206ENST00000466415 SPINT4Q6UDR6 99 aa5.34□□□□□ -1.55
VPS16-206ENST00000466415 K7ERS5 55 aa5.33□□□□□ -1.56
VPS16-206ENST00000466415 A6NN06 94 aa5.32□□□□□ -1.56
VPS16-206ENST00000466415 KRTAP19-8Q3LI54 63 aa5.3□□□□□ -1.56
VPS16-206ENST00000466415 PLAC4Q8WY50 150 aa5.3□□□□□ -1.56
VPS16-206ENST00000466415 KRTAP12-1P59990 96 aa5.29□□□□□ -1.56
VPS16-206ENST00000466415 KRTAP12-2P59991 146 aa5.27□□□□□ -1.57
VPS16-206ENST00000466415 MT1BP07438 61 aa5.23□□□□□ -1.57
VPS16-206ENST00000466415 CAMK2N1Q7Z7J9 78 aa5.23□□□□□ -1.57
VPS16-206ENST00000466415 KTN1-AS1Q86SY8 53 aa5.15□□□□□ -1.59
VPS16-206ENST00000466415 KRTAP9-2Q9BYQ4 174 aa5.12□□□□□ -1.59
VPS16-206ENST00000466415 KRTAP4-8Q9BYQ9 185 aa5.12□□□□□ -1.59
VPS16-206ENST00000466415 H3BS24 57 aa5.11□□□□□ -1.59
VPS16-206ENST00000466415 PRO2289Q9P1D8 64 aa5.09□□□□□ -1.59
VPS16-206ENST00000466415 USH2AO75445 5202 aa5.08□□□□□ -1.6
VPS16-206ENST00000466415 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.05□□□□□ -1.6
VPS16-206ENST00000466415 MT1XP80297 61 aa5.04□□□□□ -1.6
VPS16-206ENST00000466415 ROMO1P60602 79 aa5.03□□□□□ -1.6
VPS16-206ENST00000466415 KRTAP9-6A0A140TA67 174 aa5.02□□□□□ -1.61
VPS16-206ENST00000466415 KRTAP10-5P60370 271 aa5.02□□□□□ -1.61
VPS16-206ENST00000466415 KRTAP19-6Q3LI70 58 aa5.01□□□□□ -1.61
VPS16-206ENST00000466415 C10orf95Q9H7T3 257 aa5□□□□□ -1.61
VPS16-206ENST00000466415 SSPOA2VEC9 5147 aa4.95□□□□□ -1.62
VPS16-206ENST00000466415 TNP1P09430 55 aa4.94□□□□□ -1.62
VPS16-206ENST00000466415 CRCT1Q9UGL9 99 aa4.93□□□□□ -1.62
VPS16-206ENST00000466415 KRTAP25-1Q3LHN0 102 aa4.9□□□□□ -1.63
VPS16-206ENST00000466415 LCE3BQ5TA77 95 aa4.9□□□□□ -1.63
VPS16-206ENST00000466415 KRTAP10-7P60409 375 aaPredicted RBP4.83□□□□□ -1.64
VPS16-206ENST00000466415 FSIP2Q5CZC0 6907 aa4.82□□□□□ -1.64
VPS16-206ENST00000466415 KRTAP10-12P60413 245 aa4.81□□□□□ -1.64
VPS16-206ENST00000466415 KRTAP9-9Q9BYP9 154 aa4.78□□□□□ -1.64
VPS16-206ENST00000466415 KRTAP9-4Q9BYQ2 154 aa4.78□□□□□ -1.64
VPS16-206ENST00000466415 KRTAP4-8A0A0G2JLE6 195 aa4.76□□□□□ -1.65
VPS16-206ENST00000466415 PRAC1Q96KF2 57 aa4.76□□□□□ -1.65
VPS16-206ENST00000466415 A0A0A0MQY5 61 aa4.75□□□□□ -1.65
VPS16-206ENST00000466415 KRTAP4-12Q9BQ66 201 aa4.75□□□□□ -1.65
VPS16-206ENST00000466415 FCGBPQ9Y6R7 5405 aaPredicted RBP4.75□□□□□ -1.65
VPS16-206ENST00000466415 PP632Q6XCG6 107 aa4.72□□□□□ -1.65
VPS16-206ENST00000466415 LCE3AQ5TA76 89 aa4.71□□□□□ -1.66
VPS16-206ENST00000466415 KRTAP23-1A1A580 65 aa4.7□□□□□ -1.66
VPS16-206ENST00000466415 KRTAP8-1Q8IUC2 63 aa4.63□□□□□ -1.67
VPS16-206ENST00000466415 KRTAP4-7Q9BYR0 210 aa4.61□□□□□ -1.67
VPS16-206ENST00000466415 KMT2DO14686 5537 aa4.55□□□□□ -1.68
VPS16-206ENST00000466415 KRTAP19-5Q3LI72 72 aa4.54□□□□□ -1.68
VPS16-206ENST00000466415 LCE1DQ5T752 114 aa4.54□□□□□ -1.68
VPS16-206ENST00000466415 KRTAP12-3P60328 96 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms