RNA–Protein interactions for RNA: ENST00000461945.1

CARMIL1-202, Transcript of capping protein regulator and myosin 1 linker 1, humanhuman

TSL 1 (best) BASIC

Gene CARMIL1, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL1-202ENST00000461945 KRTAP3-1Q9BYR8 98 aa11.32□□□□□ -0.6
CARMIL1-202ENST00000461945 H0Y9P7 68 aa11.28□□□□□ -0.6
CARMIL1-202ENST00000461945 ATOX1O00244 68 aa11.25□□□□□ -0.61
CARMIL1-202ENST00000461945 KRTAP9-3Q9BYQ3 159 aa11.25□□□□□ -0.61
CARMIL1-202ENST00000461945 KRTAP4-11Q9BYQ6 195 aa11.22□□□□□ -0.61
CARMIL1-202ENST00000461945 S4R3F8 94 aa11.21□□□□□ -0.61
CARMIL1-202ENST00000461945 C5orf47Q569G3 176 aa11.18□□□□□ -0.62
CARMIL1-202ENST00000461945 USH2AO75445 5202 aa11.16□□□□□ -0.62
CARMIL1-202ENST00000461945 OCR1Q9BZK8 76 aa11.16□□□□□ -0.62
CARMIL1-202ENST00000461945 LCA10Q71F78 164 aa11.13□□□□□ -0.63
CARMIL1-202ENST00000461945 LINC00208Q96KT6 92 aa11.12□□□□□ -0.63
CARMIL1-202ENST00000461945 LCE5AQ5TCM9 118 aa11.11□□□□□ -0.63
CARMIL1-202ENST00000461945 K7ERU9 68 aa11.1□□□□□ -0.63
CARMIL1-202ENST00000461945 MP68P56378 58 aa11.1□□□□□ -0.63
CARMIL1-202ENST00000461945 CSAG1Q6PB30 78 aa11.09□□□□□ -0.63
CARMIL1-202ENST00000461945 SCGB1A1P11684 91 aa11.07□□□□□ -0.64
CARMIL1-202ENST00000461945 KLKP1Q107X0 134 aa11.02□□□□□ -0.65
CARMIL1-202ENST00000461945 SSPOA2VEC9 5147 aa11.02□□□□□ -0.65
CARMIL1-202ENST00000461945 MT-ATP8P03928 68 aa11.01□□□□□ -0.65
CARMIL1-202ENST00000461945 IMUPQ9GZP8 106 aa11.01□□□□□ -0.65
CARMIL1-202ENST00000461945 FAM236AA0A1B0GUQ0 79 aa10.96□□□□□ -0.65
CARMIL1-202ENST00000461945 FAM236BA0A1B0GV22 79 aa10.96□□□□□ -0.65
CARMIL1-202ENST00000461945 H3BPC8 53 aa10.96□□□□□ -0.65
CARMIL1-202ENST00000461945 A8MUN3 132 aa10.92□□□□□ -0.66
CARMIL1-202ENST00000461945 NDUFC1O43677 76 aa10.85□□□□□ -0.67
CARMIL1-202ENST00000461945 SMIM20Q8N5G0 67 aa10.8□□□□□ -0.68
CARMIL1-202ENST00000461945 TRAV7A0A075B6U4 112 aa10.79□□□□□ -0.68
CARMIL1-202ENST00000461945 FCGBPQ9Y6R7 5405 aaPredicted RBP10.72□□□□□ -0.69
CARMIL1-202ENST00000461945 DMAC1Q96GE9 116 aa10.71□□□□□ -0.69
CARMIL1-202ENST00000461945 KRTAP19-6Q3LI70 58 aa10.7□□□□□ -0.7
CARMIL1-202ENST00000461945 SPRR2GQ9BYE4 73 aa10.67□□□□□ -0.7
CARMIL1-202ENST00000461945 H0YAA0 97 aa10.65□□□□□ -0.7
CARMIL1-202ENST00000461945 CRIPTQ9P021 101 aa10.6□□□□□ -0.71
CARMIL1-202ENST00000461945 ADM2Q7Z4H4 148 aa10.58□□□□□ -0.72
CARMIL1-202ENST00000461945 KRTAP19-8Q3LI54 63 aa10.57□□□□□ -0.72
CARMIL1-202ENST00000461945 Q5VV11 94 aa10.57□□□□□ -0.72
CARMIL1-202ENST00000461945 SNURFQ9Y675 71 aa10.56□□□□□ -0.72
CARMIL1-202ENST00000461945 MT1BP07438 61 aa10.54□□□□□ -0.72
CARMIL1-202ENST00000461945 ACYP2P14621 99 aa10.51□□□□□ -0.73
CARMIL1-202ENST00000461945 SERP2Q8N6R1 65 aa10.51□□□□□ -0.73
CARMIL1-202ENST00000461945 C20orf197Q8N268 126 aa10.47□□□□□ -0.73
CARMIL1-202ENST00000461945 P0C880 135 aa10.37□□□□□ -0.75
CARMIL1-202ENST00000461945 CHKB-CPT1BH3BT56 60 aa10.35□□□□□ -0.75
CARMIL1-202ENST00000461945 SPANXA2-OT1Q8N9U9 137 aa10.35□□□□□ -0.75
CARMIL1-202ENST00000461945 MACF1Q9UPN3 7388 aaKnown RBP10.34□□□□□ -0.75
CARMIL1-202ENST00000461945 A6NN06 94 aa10.34□□□□□ -0.75
CARMIL1-202ENST00000461945 SPTSSBQ8NFR3 76 aa10.34□□□□□ -0.75
CARMIL1-202ENST00000461945 R4GN34 69 aa10.29□□□□□ -0.76
CARMIL1-202ENST00000461945 COX7CP15954 63 aa10.27□□□□□ -0.77
CARMIL1-202ENST00000461945 KRTAP10-5P60370 271 aa10.25□□□□□ -0.77
CARMIL1-202ENST00000461945 SYNE2Q8WXH0 6885 aaKnown RBP10.24□□□□□ -0.77
CARMIL1-202ENST00000461945 M0QZ58 72 aa10.23□□□□□ -0.77
CARMIL1-202ENST00000461945 PLAC4Q8WY50 150 aa10.11□□□□□ -0.79
CARMIL1-202ENST00000461945 LINC01554Q52M75 96 aa10.08□□□□□ -0.8
CARMIL1-202ENST00000461945 COA5Q86WW8 74 aa10.07□□□□□ -0.8
CARMIL1-202ENST00000461945 CYSTM1Q9H1C7 97 aa10.06□□□□□ -0.8
CARMIL1-202ENST00000461945 ANAPC13Q9BS18 74 aa10.05□□□□□ -0.8
CARMIL1-202ENST00000461945 H7BZZ5 65 aa10.04□□□□□ -0.8
CARMIL1-202ENST00000461945 KRTAP5-3Q6L8H2 238 aa10.04□□□□□ -0.8
CARMIL1-202ENST00000461945 KRTAP6-3Q3LI67 103 aa10□□□□□ -0.81
CARMIL1-202ENST00000461945 PRO2289Q9P1D8 64 aa9.98□□□□□ -0.81
CARMIL1-202ENST00000461945 MT1XP80297 61 aa9.95□□□□□ -0.82
CARMIL1-202ENST00000461945 CCDC179H3BU77 68 aa9.84□□□□□ -0.83
CARMIL1-202ENST00000461945 SEC61GP60059 68 aa9.81□□□□□ -0.84
CARMIL1-202ENST00000461945 KRTAP13-4Q3LI77 160 aa9.79□□□□□ -0.84
CARMIL1-202ENST00000461945 SERP1Q9Y6X1 66 aa9.79□□□□□ -0.84
CARMIL1-202ENST00000461945 KRTAP12-2P59991 146 aa9.65□□□□□ -0.86
CARMIL1-202ENST00000461945 KRTAP5-9P26371 169 aa9.63□□□□□ -0.87
CARMIL1-202ENST00000461945 ATP5EP56381 51 aaPredicted RBP9.63□□□□□ -0.87
CARMIL1-202ENST00000461945 A0A1B0GU33 70 aa9.61□□□□□ -0.87
CARMIL1-202ENST00000461945 KMT2DO14686 5537 aa9.6□□□□□ -0.87
CARMIL1-202ENST00000461945 MUC12Q9UKN1 5478 aa9.6□□□□□ -0.87
CARMIL1-202ENST00000461945 NEBP20929 6669 aa9.6□□□□□ -0.87
CARMIL1-202ENST00000461945 SPATA8Q6RVD6 105 aa9.57□□□□□ -0.88
CARMIL1-202ENST00000461945 A0A1B0GU69 56 aa9.56□□□□□ -0.88
CARMIL1-202ENST00000461945 A0A0D9SG42 100 aa9.55□□□□□ -0.88
CARMIL1-202ENST00000461945 CAMK2N1Q7Z7J9 78 aa9.52□□□□□ -0.89
CARMIL1-202ENST00000461945 KRTAP10-7P60409 375 aaPredicted RBP9.51□□□□□ -0.89
CARMIL1-202ENST00000461945 KRTAP8-1Q8IUC2 63 aa9.5□□□□□ -0.89
CARMIL1-202ENST00000461945 TMEM258P61165 79 aa9.47□□□□□ -0.89
CARMIL1-202ENST00000461945 SPRR2FQ96RM1 72 aa9.45□□□□□ -0.9
CARMIL1-202ENST00000461945 KRTAP10-12P60413 245 aa9.44□□□□□ -0.9
CARMIL1-202ENST00000461945 SPINT4Q6UDR6 99 aa9.4□□□□□ -0.9
CARMIL1-202ENST00000461945 MDN1Q9NU22 5596 aa9.37□□□□□ -0.91
CARMIL1-202ENST00000461945 KRTAP23-1A1A580 65 aa9.37□□□□□ -0.91
CARMIL1-202ENST00000461945 SMIM26A0A096LP01 95 aa9.34□□□□□ -0.91
CARMIL1-202ENST00000461945 PRR15LQ9BU68 103 aa9.34□□□□□ -0.91
CARMIL1-202ENST00000461945 KRTAP12-1P59990 96 aa9.33□□□□□ -0.92
CARMIL1-202ENST00000461945 KRTAP15-1Q3LI76 137 aa9.33□□□□□ -0.92
CARMIL1-202ENST00000461945 LINC01558Q9Y6Z2 57 aa9.31□□□□□ -0.92
CARMIL1-202ENST00000461945 A8MU10 97 aa9.27□□□□□ -0.93
CARMIL1-202ENST00000461945 SPRR2EP22531 72 aa9.25□□□□□ -0.93
CARMIL1-202ENST00000461945 SPRR2BP35325 72 aa9.25□□□□□ -0.93
CARMIL1-202ENST00000461945 SPRR2AP35326 72 aa9.25□□□□□ -0.93
CARMIL1-202ENST00000461945 KRTAP20-1Q3LI63 56 aa9.14□□□□□ -0.95
CARMIL1-202ENST00000461945 LCE1AQ5T7P2 110 aa9.14□□□□□ -0.95
CARMIL1-202ENST00000461945 UQCR11O14957 56 aa9.04□□□□□ -0.96
CARMIL1-202ENST00000461945 KRTAP2-3P0C7H8 128 aa8.97□□□□□ -0.97
CARMIL1-202ENST00000461945 KRTAP2-4Q9BYR9 128 aa8.97□□□□□ -0.97
CARMIL1-202ENST00000461945 SPRR2DP22532 72 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms