RNA–Protein interactions for RNA: ENST00000461945.1

CARMIL1-202, Transcript of capping protein regulator and myosin 1 linker 1, humanhuman

TSL 1 (best) BASIC

Gene CARMIL1, Length 1,290 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL1-202ENST00000461945 KRTAP3-1Q9BYR8 98 aa11.32□□□□□ -0.6
CARMIL1-202ENST00000461945 H0Y9P7 68 aa11.28□□□□□ -0.6
CARMIL1-202ENST00000461945 ATOX1O00244 68 aa11.25□□□□□ -0.61
CARMIL1-202ENST00000461945 KRTAP9-3Q9BYQ3 159 aa11.25□□□□□ -0.61
CARMIL1-202ENST00000461945 KRTAP4-11Q9BYQ6 195 aa11.22□□□□□ -0.61
CARMIL1-202ENST00000461945 S4R3F8 94 aa11.21□□□□□ -0.61
CARMIL1-202ENST00000461945 C5orf47Q569G3 176 aa11.18□□□□□ -0.62
CARMIL1-202ENST00000461945 USH2AO75445 5202 aa11.16□□□□□ -0.62
CARMIL1-202ENST00000461945 OCR1Q9BZK8 76 aa11.16□□□□□ -0.62
CARMIL1-202ENST00000461945 LCA10Q71F78 164 aa11.13□□□□□ -0.63
CARMIL1-202ENST00000461945 LINC00208Q96KT6 92 aa11.12□□□□□ -0.63
CARMIL1-202ENST00000461945 LCE5AQ5TCM9 118 aa11.11□□□□□ -0.63
CARMIL1-202ENST00000461945 K7ERU9 68 aa11.1□□□□□ -0.63
CARMIL1-202ENST00000461945 MP68P56378 58 aa11.1□□□□□ -0.63
CARMIL1-202ENST00000461945 CSAG1Q6PB30 78 aa11.09□□□□□ -0.63
CARMIL1-202ENST00000461945 SCGB1A1P11684 91 aa11.07□□□□□ -0.64
CARMIL1-202ENST00000461945 KLKP1Q107X0 134 aa11.02□□□□□ -0.65
CARMIL1-202ENST00000461945 SSPOA2VEC9 5147 aa11.02□□□□□ -0.65
CARMIL1-202ENST00000461945 MT-ATP8P03928 68 aa11.01□□□□□ -0.65
CARMIL1-202ENST00000461945 IMUPQ9GZP8 106 aa11.01□□□□□ -0.65
CARMIL1-202ENST00000461945 FAM236AA0A1B0GUQ0 79 aa10.96□□□□□ -0.65
CARMIL1-202ENST00000461945 FAM236BA0A1B0GV22 79 aa10.96□□□□□ -0.65
CARMIL1-202ENST00000461945 H3BPC8 53 aa10.96□□□□□ -0.65
CARMIL1-202ENST00000461945 A8MUN3 132 aa10.92□□□□□ -0.66
CARMIL1-202ENST00000461945 NDUFC1O43677 76 aa10.85□□□□□ -0.67
CARMIL1-202ENST00000461945 SMIM20Q8N5G0 67 aa10.8□□□□□ -0.68
CARMIL1-202ENST00000461945 TRAV7A0A075B6U4 112 aa10.79□□□□□ -0.68
CARMIL1-202ENST00000461945 FCGBPQ9Y6R7 5405 aaPredicted RBP10.72□□□□□ -0.69
CARMIL1-202ENST00000461945 DMAC1Q96GE9 116 aa10.71□□□□□ -0.69
CARMIL1-202ENST00000461945 KRTAP19-6Q3LI70 58 aa10.7□□□□□ -0.7
CARMIL1-202ENST00000461945 SPRR2GQ9BYE4 73 aa10.67□□□□□ -0.7
CARMIL1-202ENST00000461945 H0YAA0 97 aa10.65□□□□□ -0.7
CARMIL1-202ENST00000461945 CRIPTQ9P021 101 aa10.6□□□□□ -0.71
CARMIL1-202ENST00000461945 ADM2Q7Z4H4 148 aa10.58□□□□□ -0.72
CARMIL1-202ENST00000461945 KRTAP19-8Q3LI54 63 aa10.57□□□□□ -0.72
CARMIL1-202ENST00000461945 Q5VV11 94 aa10.57□□□□□ -0.72
CARMIL1-202ENST00000461945 SNURFQ9Y675 71 aa10.56□□□□□ -0.72
CARMIL1-202ENST00000461945 MT1BP07438 61 aa10.54□□□□□ -0.72
CARMIL1-202ENST00000461945 ACYP2P14621 99 aa10.51□□□□□ -0.73
CARMIL1-202ENST00000461945 SERP2Q8N6R1 65 aa10.51□□□□□ -0.73
CARMIL1-202ENST00000461945 C20orf197Q8N268 126 aa10.47□□□□□ -0.73
CARMIL1-202ENST00000461945 P0C880 135 aa10.37□□□□□ -0.75
CARMIL1-202ENST00000461945 CHKB-CPT1BH3BT56 60 aa10.35□□□□□ -0.75
CARMIL1-202ENST00000461945 SPANXA2-OT1Q8N9U9 137 aa10.35□□□□□ -0.75
CARMIL1-202ENST00000461945 MACF1Q9UPN3 7388 aaKnown RBP10.34□□□□□ -0.75
CARMIL1-202ENST00000461945 A6NN06 94 aa10.34□□□□□ -0.75
CARMIL1-202ENST00000461945 SPTSSBQ8NFR3 76 aa10.34□□□□□ -0.75
CARMIL1-202ENST00000461945 R4GN34 69 aa10.29□□□□□ -0.76
CARMIL1-202ENST00000461945 COX7CP15954 63 aa10.27□□□□□ -0.77
CARMIL1-202ENST00000461945 KRTAP10-5P60370 271 aa10.25□□□□□ -0.77
CARMIL1-202ENST00000461945 SYNE2Q8WXH0 6885 aaKnown RBP10.24□□□□□ -0.77
CARMIL1-202ENST00000461945 M0QZ58 72 aa10.23□□□□□ -0.77
CARMIL1-202ENST00000461945 PLAC4Q8WY50 150 aa10.11□□□□□ -0.79
CARMIL1-202ENST00000461945 LINC01554Q52M75 96 aa10.08□□□□□ -0.8
CARMIL1-202ENST00000461945 COA5Q86WW8 74 aa10.07□□□□□ -0.8
CARMIL1-202ENST00000461945 CYSTM1Q9H1C7 97 aa10.06□□□□□ -0.8
CARMIL1-202ENST00000461945 ANAPC13Q9BS18 74 aa10.05□□□□□ -0.8
CARMIL1-202ENST00000461945 H7BZZ5 65 aa10.04□□□□□ -0.8
CARMIL1-202ENST00000461945 KRTAP5-3Q6L8H2 238 aa10.04□□□□□ -0.8
CARMIL1-202ENST00000461945 KRTAP6-3Q3LI67 103 aa10□□□□□ -0.81
CARMIL1-202ENST00000461945 PRO2289Q9P1D8 64 aa9.98□□□□□ -0.81
CARMIL1-202ENST00000461945 MT1XP80297 61 aa9.95□□□□□ -0.82
CARMIL1-202ENST00000461945 CCDC179H3BU77 68 aa9.84□□□□□ -0.83
CARMIL1-202ENST00000461945 SEC61GP60059 68 aa9.81□□□□□ -0.84
CARMIL1-202ENST00000461945 KRTAP13-4Q3LI77 160 aa9.79□□□□□ -0.84
CARMIL1-202ENST00000461945 SERP1Q9Y6X1 66 aa9.79□□□□□ -0.84
CARMIL1-202ENST00000461945 KRTAP12-2P59991 146 aa9.65□□□□□ -0.86
CARMIL1-202ENST00000461945 KRTAP5-9P26371 169 aa9.63□□□□□ -0.87
CARMIL1-202ENST00000461945 ATP5EP56381 51 aaPredicted RBP9.63□□□□□ -0.87
CARMIL1-202ENST00000461945 A0A1B0GU33 70 aa9.61□□□□□ -0.87
CARMIL1-202ENST00000461945 KMT2DO14686 5537 aa9.6□□□□□ -0.87
CARMIL1-202ENST00000461945 MUC12Q9UKN1 5478 aa9.6□□□□□ -0.87
CARMIL1-202ENST00000461945 NEBP20929 6669 aa9.6□□□□□ -0.87
CARMIL1-202ENST00000461945 SPATA8Q6RVD6 105 aa9.57□□□□□ -0.88
CARMIL1-202ENST00000461945 A0A1B0GU69 56 aa9.56□□□□□ -0.88
CARMIL1-202ENST00000461945 A0A0D9SG42 100 aa9.55□□□□□ -0.88
CARMIL1-202ENST00000461945 CAMK2N1Q7Z7J9 78 aa9.52□□□□□ -0.89
CARMIL1-202ENST00000461945 KRTAP10-7P60409 375 aaPredicted RBP9.51□□□□□ -0.89
CARMIL1-202ENST00000461945 KRTAP8-1Q8IUC2 63 aa9.5□□□□□ -0.89
CARMIL1-202ENST00000461945 TMEM258P61165 79 aa9.47□□□□□ -0.89
CARMIL1-202ENST00000461945 SPRR2FQ96RM1 72 aa9.45□□□□□ -0.9
CARMIL1-202ENST00000461945 KRTAP10-12P60413 245 aa9.44□□□□□ -0.9
CARMIL1-202ENST00000461945 SPINT4Q6UDR6 99 aa9.4□□□□□ -0.9
CARMIL1-202ENST00000461945 MDN1Q9NU22 5596 aa9.37□□□□□ -0.91
CARMIL1-202ENST00000461945 KRTAP23-1A1A580 65 aa9.37□□□□□ -0.91
CARMIL1-202ENST00000461945 SMIM26A0A096LP01 95 aa9.34□□□□□ -0.91
CARMIL1-202ENST00000461945 PRR15LQ9BU68 103 aa9.34□□□□□ -0.91
CARMIL1-202ENST00000461945 KRTAP12-1P59990 96 aa9.33□□□□□ -0.92
CARMIL1-202ENST00000461945 KRTAP15-1Q3LI76 137 aa9.33□□□□□ -0.92
CARMIL1-202ENST00000461945 LINC01558Q9Y6Z2 57 aa9.31□□□□□ -0.92
CARMIL1-202ENST00000461945 A8MU10 97 aa9.27□□□□□ -0.93
CARMIL1-202ENST00000461945 SPRR2EP22531 72 aa9.25□□□□□ -0.93
CARMIL1-202ENST00000461945 SPRR2BP35325 72 aa9.25□□□□□ -0.93
CARMIL1-202ENST00000461945 SPRR2AP35326 72 aa9.25□□□□□ -0.93
CARMIL1-202ENST00000461945 KRTAP20-1Q3LI63 56 aa9.14□□□□□ -0.95
CARMIL1-202ENST00000461945 LCE1AQ5T7P2 110 aa9.14□□□□□ -0.95
CARMIL1-202ENST00000461945 UQCR11O14957 56 aa9.04□□□□□ -0.96
CARMIL1-202ENST00000461945 KRTAP2-3P0C7H8 128 aa8.97□□□□□ -0.97
CARMIL1-202ENST00000461945 KRTAP2-4Q9BYR9 128 aa8.97□□□□□ -0.97
CARMIL1-202ENST00000461945 SPRR2DP22532 72 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms